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NBDC - LSDB Archive
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DK963258
Clone id TST39A01NGRL0016_A20
Library
Length 640
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_A20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGACAGCAGCCAGTAGCCTTCAACTCCCGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAGG
TGCAGAAGCCATGACGAGCGCGTTAGATATGGCGCTTGATGATCTGATTAAGACCAACAA
GCAGAGCTCGGGAGAAGGTAGAGGCAGGGGTGGGCGTGGCCGAGCGCGCCGAGGCCGGGG
CGCCTCTTCTGCGGGTCCGATTCGCAAGAATTCCACTCGATCTACCACCCGCCCGTCCCC
CTACTCTTTCACCACGCCTGCACAGAGAGCTCCAGAGGGTCAGTGGGATCATGATTTGTA
TGAGGAAGGTGCAAGTGTGGCTCCTTTGCGACCAAATACAGGAATTGAGACAGGCACTAA
GCTTTTTATATCCAACTTGGATTTTGGGGTATCAAATGAAGATATTAAGGAGCTTTTTTC
AGAAATTGGTGACATCAAGCGGAGCACTGTTCATTACGACAGGAGTGGCCGCTCAAAGGG
CACCGCAGAAGTTGTTTATTCAAGAAGAGCTGATGCTGTAGCAGCCTCGAAAAGGTACAA
TAACGTGCAGCTTGATGGCAAACCAATGAAAATAGAAATTGTTGGAACAAATCTAGCAAT
ACCTGCACCTCCTGTTCGAGTTGCAAATGGAGCCGCTTCC
■■Homology search results ■■ -
sp_hit_id Q86V81
Definition sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens
Align length 116
Score (bit) 122.0
E-value 2.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963258|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_A20, 5'
         (640 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=T...   122   2e-27
sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=T...   121   3e-27
sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS...   120   6e-27
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    65   3e-10
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    62   3e-09
sp|Q8BG81|PDIP3_MOUSE Polymerase delta-interacting protein 3 OS=...    62   3e-09
sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3 OS=...    61   6e-09
sp|Q09330|MLO3_SCHPO mRNA export protein mlo3 OS=Schizosaccharom...    60   1e-08
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    58   4e-08
sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus...    58   4e-08
sp|Q9P2K5|MYEF2_HUMAN Myelin expression factor 2 OS=Homo sapiens...    58   4e-08
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    58   5e-08
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    57   1e-07
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    56   2e-07
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    54   5e-07
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    54   9e-07
sp|Q62826|HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M OS...    53   1e-06
sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M ...    53   1e-06
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    52   2e-06
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...    52   2e-06
sp|Q9D0E1|HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M ...    52   2e-06
sp|P25555|GBP2_YEAST Single-strand telomeric DNA-binding protein...    52   2e-06
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...    52   3e-06
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    51   4e-06
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ...    51   6e-06
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ...    51   6e-06
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    50   8e-06
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ...    50   8e-06
sp|Q9URV0|YBLC_SCHPO Uncharacterized RNA-binding protein C106.12...    50   1e-05
sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic ...    50   1e-05

>sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens
           GN=THOC4 PE=1 SV=3
          Length = 257

 Score =  122 bits (305), Expect = 2e-27
 Identities = 58/116 (50%), Positives = 80/116 (68%)
 Frame = +2

Query: 281 QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYD 460
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G +K++ VHYD
Sbjct: 86  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYD 140

Query: 461 RSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVRVAN 628
           RSGRS GTA+V + R+ADA+ A K+YN V LDG+PM I++V + +     P +  N
Sbjct: 141 RSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRPAQSVN 196


>sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus
           GN=Thoc4 PE=1 SV=3
          Length = 255

 Score =  121 bits (304), Expect = 3e-27
 Identities = 58/116 (50%), Positives = 80/116 (68%)
 Frame = +2

Query: 281 QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYD 460
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G +K++ VHYD
Sbjct: 85  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYD 139

Query: 461 RSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVRVAN 628
           RSGRS GTA+V + R+ADA+ A K+YN V LDG+PM I++V + +     P +  N
Sbjct: 140 RSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSIN 195


>sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2
           OS=Mus musculus GN=Refbp2 PE=1 SV=1
          Length = 218

 Score =  120 bits (301), Expect = 6e-27
 Identities = 68/186 (36%), Positives = 95/186 (51%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M   +DM+LDD+IK N+                           R+N             
Sbjct: 1   MADKMDMSLDDIIKLNRNQRRVNRGGGP----------------RRNRPAIARGGRNRPA 44

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIG 430
                +    +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G
Sbjct: 45  PYSRPKPLPDKWQHDLFDSGCG-----GGEGVETGAKLLVSNLDFGVSDADIQELFAEFG 99

Query: 431 DIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAP 610
            +K++ V YDRSGRS GTA+V + RRADA+ A K+Y  V LDG+PM I++V + +     
Sbjct: 100 TLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQIDPQRR 159

Query: 611 PVRVAN 628
           P +  N
Sbjct: 160 PAQSGN 165


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +2

Query: 287 DHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR- 463
           + D++ +G   AP+  N+      KLF+ NL F V +  + +LF   G+++   V YD+ 
Sbjct: 77  EDDMFADGDDSAPVERNS-FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKV 135

Query: 464 SGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR 619
           +GRS+G   V  S  A+  AA++++N  + +G+P+++       A P PP R
Sbjct: 136 TGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN------AGPPPPKR 181



 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = +2

Query: 338 TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRAD 514
           +G  +G +L++ NL +GV +  ++ LF+E G +  + V YDR SGRSKG   V  S   +
Sbjct: 251 SGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQE 310

Query: 515 AVAASKRYNNVQLDGKPMKI 574
              A    N   LDG+ +++
Sbjct: 311 VQKAINSLNGADLDGRQIRV 330


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +2

Query: 287 DHDLYEEG-ASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR 463
           + ++ E+G A VAP +  +      KLF+ NL F V +  + +LF   G+++   V YD+
Sbjct: 68  EFEVEEDGFADVAPPKEQS-FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDK 126

Query: 464 -SGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR 619
            +GRS+G   V  S  ++  AA++++N  +LDG+P+++       A P PP R
Sbjct: 127 ITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN------AGPPPPKR 173



 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +2

Query: 338 TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRAD 514
           +G  +G ++++ NL +GV +  ++ LFSE G +  + V YDR SGRSKG   V Y    +
Sbjct: 198 SGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257

Query: 515 AVAASKRYNNVQLDGKPMKI 574
              A K  +   LDG+ +++
Sbjct: 258 VQNAIKSLDGADLDGRQIRV 277


>sp|Q8BG81|PDIP3_MOUSE Polymerase delta-interacting protein 3 OS=Mus
           musculus GN=Poldip3 PE=2 SV=1
          Length = 420

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 302 EEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKG 481
           E    + P  P      GTK+ ++NL   V+ EDI ELF   G +KR+ + +       G
Sbjct: 262 EPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------G 315

Query: 482 TAEVVYSRRADAVAASKRYNNVQLDGKPMKIEI 580
            AEVV+ ++ DA+ A K+YNN  LDG+PMK  +
Sbjct: 316 VAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348


>sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3
           OS=Homo sapiens GN=POLDIP3 PE=1 SV=2
          Length = 421

 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +2

Query: 353 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 532
           GTK+ ++NL   V+ EDI ELF   G +KR+ + +       G AEVV+ ++ DA+ A K
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYK 332

Query: 533 RYNNVQLDGKPMKIEI 580
           +YNN  LDG+PMK  +
Sbjct: 333 KYNNRCLDGQPMKCNL 348


>sp|Q09330|MLO3_SCHPO mRNA export protein mlo3
           OS=Schizosaccharomyces pombe GN=mlo3 PE=1 SV=1
          Length = 199

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = +2

Query: 344 IETGTKLFISNLDFGVSNEDIKELF-SEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAV 520
           I   +K+ +SNL   V+   +KELF   IG  KR ++ Y  +GRSKG A +++SR  DA 
Sbjct: 51  ISEESKIIVSNLPTDVTEAQVKELFVKSIGPCKRVSLAYGPNGRSKGIATIIFSRPGDAT 110

Query: 521 AASKRYNNVQLDG-KPMKIEIV 583
            A ++Y    +DG + MK+EI+
Sbjct: 111 RAYEQYEGRLVDGTRKMKVEII 132


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +2

Query: 311 ASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTA 487
           +S    R    +++  ++++ NL +GV +  +KELFSE G++  + V YDR SGRS+G  
Sbjct: 192 SSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFG 251

Query: 488 EVVYSRRADAVAASKRYNNVQLDGKPMKI 574
            V YS   +   A    N V LDG+ +++
Sbjct: 252 FVTYSSSKEVNDAIDSLNGVDLDGRSIRV 280



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 359 KLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKR 535
           KLF+ NL F V +  +  LF   G+++   V YD+ +GRS+G   V  S + +  AA ++
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147

Query: 536 YNNVQLDGKPMKIEIVGTNLAIPAPPVR 619
           +N  ++DG+ +++       A PAP  R
Sbjct: 148 FNGYEIDGRAIRVN------AGPAPAKR 169


>sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus
           GN=Myef2 PE=1 SV=1
          Length = 591

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 26/76 (34%), Positives = 47/76 (61%)
 Frame = +2

Query: 353 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 532
           G+ +F++NLDF V  + +KE+FS  G +KR+ +  D+ G+S+G   V + +  +AV A  
Sbjct: 223 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 282

Query: 533 RYNNVQLDGKPMKIEI 580
            +N   L  +PM +++
Sbjct: 283 MFNGQFLFDRPMHVKM 298



 Score = 41.2 bits (95), Expect = 0.005
 Identities = 19/76 (25%), Positives = 42/76 (55%)
 Frame = +2

Query: 353 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 532
           G ++F+ NL F ++ + +KE FS+ G +  + +  + +G+SKG   V +     A  A +
Sbjct: 513 GNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFESAESAEKACR 571

Query: 533 RYNNVQLDGKPMKIEI 580
             N +++ G+ + + +
Sbjct: 572 IMNGIKISGREIDVRL 587



 Score = 37.7 bits (86), Expect = 0.051
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 359 KLFISNLDFGVSNEDIKELFSE-IGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKR 535
           ++FISN+ + +  + IK+L  E +G++    +  D  G+S+G   V +        A + 
Sbjct: 92  RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALET 151

Query: 536 YNNVQLDGKPMKIE 577
            N   L G+P+ I+
Sbjct: 152 MNKYDLSGRPLNIK 165
tr_hit_id A7NZ48
Definition tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 189
Score (bit) 184.0
E-value 5.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963258|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_A20, 5'
         (640 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome ...   184   5e-45
tr|A5BY89|A5BY89_VITVI Putative uncharacterized protein OS=Vitis...   184   5e-45
tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella paten...   173   7e-42
tr|Q3E888|Q3E888_ARATH Uncharacterized protein At5g59950.3 OS=Ar...   171   3e-41
tr|Q9FJE1|Q9FJE1_ARATH RNA and export factor binding protein 2-I...   171   3e-41
tr|Q8L773|Q8L773_ARATH Transcriptional coactivator-like protein ...   171   3e-41
tr|B3H4K4|B3H4K4_ARATH Uncharacterized protein At5g59950.4 OS=Ar...   171   3e-41
tr|Q68VB5|Q68VB5_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   170   8e-41
tr|Q8LCA6|Q8LCA6_ARATH Transcriptional coactivator-like protein ...   168   2e-40
tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella paten...   168   3e-40
tr|Q9LZ49|Q9LZ49_ARATH Putative uncharacterized protein T22P11_1...   167   5e-40
tr|Q8L719|Q8L719_ARATH Putative uncharacterized protein At5g0253...   167   5e-40
tr|Q1MSH0|Q1MSH0_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   164   6e-39
tr|B6T346|B6T346_MAIZE Putative uncharacterized protein OS=Zea m...   160   5e-38
tr|Q68VB6|Q68VB6_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   160   8e-38
tr|Q10N90|Q10N90_ORYSJ Os03g0278300 protein OS=Oryza sativa subs...   159   1e-37
tr|A2XF57|A2XF57_ORYSI Putative uncharacterized protein OS=Oryza...   159   1e-37
tr|B6TMR7|B6TMR7_MAIZE THO complex subunit 4 OS=Zea mays PE=2 SV=1    158   2e-37
tr|B4FUT7|B4FUT7_MAIZE Putative uncharacterized protein OS=Zea m...   157   5e-37
tr|B4FQD9|B4FQD9_MAIZE Putative uncharacterized protein OS=Zea m...   157   5e-37
tr|A9SGU2|A9SGU2_PHYPA Predicted protein OS=Physcomitrella paten...   156   1e-36
tr|Q3E889|Q3E889_ARATH Uncharacterized protein At5g59950.2 OS=Ar...   155   3e-36
tr|A9TZS6|A9TZS6_PHYPA Predicted protein OS=Physcomitrella paten...   154   3e-36
tr|Q10N89|Q10N89_ORYSJ cDNA clone:002-103-H02, full insert seque...   148   3e-34
tr|Q2QZ01|Q2QZ01_ORYSJ Os12g0100100 protein OS=Oryza sativa subs...   147   5e-34
tr|A3C7R2|A3C7R2_ORYSJ Putative uncharacterized protein OS=Oryza...   147   5e-34
tr|A5ATR5|A5ATR5_VITVI Putative uncharacterized protein OS=Vitis...   145   2e-33
tr|Q2RBS3|Q2RBS3_ORYSJ RNA recognition motif family protein, exp...   143   1e-32
tr|Q0IVA9|Q0IVA9_ORYSJ Os11g0100200 protein OS=Oryza sativa subs...   143   1e-32
tr|B8AJ06|B8AJ06_ORYSI Putative uncharacterized protein OS=Oryza...   143   1e-32

>tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024369001
           PE=4 SV=1
          Length = 243

 Score =  184 bits (466), Expect = 5e-45
 Identities = 102/189 (53%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ALDM+LDDLIK NK+                        P R+              
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPG-------PARR----LPNRGANRIT 49

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPLRPN--TGIETGTKLFISNLDFGVSNEDIKELFSE 424
                +APE  W HD++ + A+  P +    + IETGTKL+ISNLD+GVSNEDIKELFSE
Sbjct: 50  PYSVSKAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSE 109

Query: 425 IGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIP 604
           +GD+KR ++HYDRSGRSKGTAEVV+SRR DAVAA KRYNNVQLDGKPMKIEIVGTN+A P
Sbjct: 110 VGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATP 169

Query: 605 APPVRVANG 631
           A    V NG
Sbjct: 170 AAVPPVTNG 178


>tr|A5BY89|A5BY89_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023787 PE=4 SV=1
          Length = 281

 Score =  184 bits (466), Expect = 5e-45
 Identities = 102/189 (53%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ALDM+LDDLIK NK+                        P R+              
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPG-------PARR----LPNRGANRIT 49

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPLRPN--TGIETGTKLFISNLDFGVSNEDIKELFSE 424
                +APE  W HD++ + A+  P +    + IETGTKL+ISNLD+GVSNEDIKELFSE
Sbjct: 50  PYSVSKAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSE 109

Query: 425 IGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIP 604
           +GD+KR ++HYDRSGRSKGTAEVV+SRR DAVAA KRYNNVQLDGKPMKIEIVGTN+A P
Sbjct: 110 VGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATP 169

Query: 605 APPVRVANG 631
           A    V NG
Sbjct: 170 AAVPPVTNG 178


>tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112481 PE=4 SV=1
          Length = 249

 Score =  173 bits (439), Expect = 7e-42
 Identities = 97/193 (50%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           MTSALDM+LDDLIKTNK                            +              
Sbjct: 1   MTSALDMSLDDLIKTNKTATRGGRGGGGGGGGGGG----------RGAAPASRRGGATAA 50

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPLRPNT---GIETGTKLFISNLDFGVSNEDIKELFS 421
               +R P+  W HD+YE     AP        GIETGTKL+ISNLD+GVSN+DIKELF 
Sbjct: 51  ADGVRRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVSNDDIKELFG 110

Query: 422 EIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-A 598
           E+GD+KR +++YDRSGRSKGTAEVV++R+ DAV+A KRYNNVQLDGKPMKIE++GTNL A
Sbjct: 111 EVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGKPMKIEMIGTNLIA 170

Query: 599 IPAPPVRVANGAA 637
            P P  R +   A
Sbjct: 171 APVPAARSSGAMA 183


>tr|Q3E888|Q3E888_ARATH Uncharacterized protein At5g59950.3
           OS=Arabidopsis thaliana GN=At5g59950 PE=4 SV=1
          Length = 242

 Score =  171 bits (434), Expect = 3e-41
 Identities = 97/189 (51%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ LDM+LDD+I  N++                        P RK+             
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPY------- 53

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 427
               Q APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+
Sbjct: 54  ----QSAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 109

Query: 428 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 604
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 110 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 169

Query: 605 APPVRVANG 631
           AP  R ANG
Sbjct: 170 APSGRPANG 178


>tr|Q9FJE1|Q9FJE1_ARATH RNA and export factor binding protein
           2-I-like protein OS=Arabidopsis thaliana PE=4 SV=1
          Length = 239

 Score =  171 bits (433), Expect = 3e-41
 Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ LDM+LDD+I  N++                        P RK+             
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQ------ 54

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 427
              + +APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+
Sbjct: 55  ---SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 111

Query: 428 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 604
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 112 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 171

Query: 605 APPVRVANG 631
           AP  R ANG
Sbjct: 172 APSGRPANG 180


>tr|Q8L773|Q8L773_ARATH Transcriptional coactivator-like protein
           OS=Arabidopsis thaliana GN=At5g59950 PE=2 SV=1
          Length = 244

 Score =  171 bits (433), Expect = 3e-41
 Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ LDM+LDD+I  N++                        P RK+             
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQ------ 54

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 427
              + +APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+
Sbjct: 55  ---SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 111

Query: 428 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 604
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 112 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 171

Query: 605 APPVRVANG 631
           AP  R ANG
Sbjct: 172 APSGRPANG 180


>tr|B3H4K4|B3H4K4_ARATH Uncharacterized protein At5g59950.4
           OS=Arabidopsis thaliana GN=At5g59950 PE=4 SV=1
          Length = 211

 Score =  171 bits (433), Expect = 3e-41
 Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ LDM+LDD+I  N++                        P RK+             
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQ------ 54

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 427
              + +APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+
Sbjct: 55  ---SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 111

Query: 428 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 604
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 112 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 171

Query: 605 APPVRVANG 631
           AP  R ANG
Sbjct: 172 APSGRPANG 180


>tr|Q68VB5|Q68VB5_NICBE ALY protein OS=Nicotiana benthamiana GN=aly
           PE=2 SV=1
          Length = 252

 Score =  170 bits (430), Expect = 8e-41
 Identities = 100/192 (52%), Positives = 114/192 (59%), Gaps = 6/192 (3%)
 Frame = +2

Query: 77  SALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXXXX 256
           +ALDM+LDDLIK NK                         P R+                
Sbjct: 4   AALDMSLDDLIKKNKTDTGGKRRGRGRGGASGPG------PARR----FPNRSANRAAPY 53

Query: 257 XAQRAPEGQWDHDLYEEGASVAPLRPNTG------IETGTKLFISNLDFGVSNEDIKELF 418
              +APE  W+HD++       P     G      I TGTKL+ISNLD+GVSNEDIKELF
Sbjct: 54  STAKAPEAAWNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELF 113

Query: 419 SEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLA 598
           SE GD+KR  +HYDRSGRSKGTAEVV+SRR DA+AA KRYNNVQLDGKPMKIEIVGTN+A
Sbjct: 114 SEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIA 173

Query: 599 IPAPPVRVANGA 634
            PA P    NGA
Sbjct: 174 TPAAP--AFNGA 183


>tr|Q8LCA6|Q8LCA6_ARATH Transcriptional coactivator-like protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 243

 Score =  168 bits (426), Expect = 2e-40
 Identities = 95/189 (50%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           M++ LDM+LDD+I  N++                        P RK+             
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQ------ 54

Query: 251 XXXAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 427
              + +APE  W HD++ + +      R + GIETGTKL+IS LD+GV NEDIKELF+E+
Sbjct: 55  ---SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISXLDYGVMNEDIKELFAEV 111

Query: 428 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 604
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 112 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 171

Query: 605 APPVRVANG 631
           AP  R ANG
Sbjct: 172 APSGRPANG 180


>tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_57202 PE=4 SV=1
          Length = 274

 Score =  168 bits (425), Expect = 3e-40
 Identities = 98/197 (49%), Positives = 120/197 (60%), Gaps = 7/197 (3%)
 Frame = +2

Query: 71  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 250
           MTSALDM+LDDLIK+NK                            +              
Sbjct: 1   MTSALDMSLDDLIKSNKTATHGGRGGGRGAAAPVPRRVGATAAAEEGYPDSRMSGPARRQ 60

Query: 251 XXXA---QRAPEGQWDHDLYEEGASV--APLRPNTG-IETGTKLFISNLDFGVSNEDIKE 412
              A   +RA +  W HD+YE  A    A +R   G IETGTKL+ISNLD GVSN+DIKE
Sbjct: 61  VTRATPVRRAMDSPWQHDMYENFAPAPSASVRGTGGNIETGTKLYISNLDHGVSNDDIKE 120

Query: 413 LFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTN 592
           LF E+GD+KR +++YDRSGRSKGTAEVV++R+ DAV A +RYNNVQLDGKPMKIE++GTN
Sbjct: 121 LFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGKPMKIEMIGTN 180

Query: 593 L-AIPAPPVRVANGAAS 640
           L A P P +R +   AS
Sbjct: 181 LVAAPVPAIRSSGAMAS 197