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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963266
Clone id TST39A01NGRL0016_B04
Library
Length 673
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_B04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACACGGACATGGGCTGTGTGAGCACAAACATGTGGGTTGTATTTGACTTGTGGTCGGTG
AAGGTGCTCCGATACCACTGAACGCGAGGGCTCTGTGCTTGACACCCACGGTTTTGTGGT
GGTCGGTATGCGCGTGTCTTGTCTGCGGCGTTGTGTGCGTGTGTATATTTCTGTATCTGC
GCAAAGATTGTAGGGTAACGTTGTGCGTGTGTTTACCCGCTGCATCTTCAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGCTGTGCGATGGATTGTGAGGGACTATGCAGCTCAT
TTTTCGGGCAAAGCATACAAAGTAGCAGTGTATGTACAGATAGGCCTCATCAGCTACATG
GTTGGTCTATGCGGATTGCTGCAACACACATTCCGCATCACAGAGGCAGTGGAGATGTGT
CTCCATGGACTGGCCACTTGCAGTATCACAGGGATCGGAAGAACATAAATGCAGCCATCA
ACGGGCGGGTATCATCACAGGTGGGCATGGAGGGTAATGGACATGCTGGGCAACAACAGC
AGGAGCAGCAGCAACAACAGCAAGCAGATCTGGTACGCATTAATGGGTACGACAGCTTGG
CAGCTCCCAAGGACCTCAACCTGCCCCGCCCTCTCACCATATCTGACTTTGCCCCTGCTC
CTATGCATGGATC
■■Homology search results ■■ -
sp_hit_id P22807
Definition sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila melanogaster
Align length 64
Score (bit) 32.7
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963266|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B04, 5'
         (673 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila melanog...    33   1.8  
sp|P39980|SIT1_YEAST Siderophore iron transporter 1 OS=Saccharom...    32   4.0  
sp|Q90888|MAFB_CHICK Transcription factor MafB OS=Gallus gallus ...    31   6.8  
sp|Q6DKE2|DVL3_XENLA Segment polarity protein dishevelled homolo...    31   6.8  
sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287...    30   8.9  
sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo s...    30   8.9  

>sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila
           melanogaster GN=slou PE=2 SV=1
          Length = 659

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -1

Query: 223 AAGKHTHNVTLQSLRRYRNIHTHTTPQTR-HAHTDHHKTVGVKHRALAFSGIGAPSPTTS 47
           AA +H H+   Q  +   + H+H  P    H H   H +     RA + S    PSP TS
Sbjct: 197 AAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATS 256

Query: 46  QIQP 35
            + P
Sbjct: 257 PLSP 260


>sp|P39980|SIT1_YEAST Siderophore iron transporter 1
           OS=Saccharomyces cerevisiae GN=SIT1 PE=2 SV=1
          Length = 628

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 289 YAAHFSGKAYKVAVYVQIGLISYMVGLCGLLQHTFRITEAVEMCLHGL 432
           YA  ++   Y+VA++  + LI+Y  GL G +++TF+         H L
Sbjct: 60  YAEMYNRPIYRVALFFSLFLIAYAYGLDGNIRYTFQAYATSSYSQHSL 107


>sp|Q90888|MAFB_CHICK Transcription factor MafB OS=Gallus gallus
           GN=MAFB PE=1 SV=1
          Length = 311

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 10/71 (14%)
 Frame = -1

Query: 229 EDAAGKHTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTVGVKHRALAFSG-------- 74
           E   G H  +  LQ    +R  H H      H H  HH+   V H  LA SG        
Sbjct: 109 EALIGSHQVSQQLQGFESFRAHHHHH----HHHHQHHHQYPAVTHEDLAGSGHPHHHHHH 164

Query: 73  --IGAPSPTTS 47
               +P+P+TS
Sbjct: 165 HHQASPTPSTS 175


>sp|Q6DKE2|DVL3_XENLA Segment polarity protein dishevelled homolog
           DVL-3 OS=Xenopus laevis GN=dvl3 PE=2 SV=1
          Length = 717

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -1

Query: 220 AGKHTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHK---TVGVKHRALAFSGIGAP 62
           +G  + + T  SLRR R     + P + H+H  HH    ++   H   +F   G P
Sbjct: 599 SGSESDHTTRSSLRRDRAASERSVPASEHSHRSHHSIAHSIRSHHTHQSFGPPGIP 654


>sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287191
           OS=Dictyostelium discoideum GN=DDB_G0287191 PE=4 SV=1
          Length = 72

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = -1

Query: 211 HTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTVGVKHRALAFSGIGAPSPTTSQIQPT 32
           H ++ +      + N H H+ P   H H+ HH      H  L  S    PSP +    P+
Sbjct: 10  HNYHHSYPHHHHHHNYHYHSYPHHHHHHSHHH-----HHHHLPSSPPSPPSPPSPPSPPS 64


>sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo
           sapiens GN=C18orf15 PE=2 SV=1
          Length = 181

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 151 LCACVYFCICAKIVG*RCACV 213
           +CACVY C+C  +    CAC+
Sbjct: 139 VCACVYVCMCVLVCMCACACM 159
tr_hit_id B5LAT0
Definition tr|B5LAT0|B5LAT0_CAPAN Putative arogenate dehydratase OS=Capsicum annuum
Align length 62
Score (bit) 45.4
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963266|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B04, 5'
         (673 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5LAT0|B5LAT0_CAPAN Putative arogenate dehydratase OS=Capsicu...    45   0.003
tr|A7PQJ0|A7PQJ0_VITVI Chromosome chr6 scaffold_25, whole genome...    45   0.003
tr|A5BWG3|A5BWG3_VITVI Putative uncharacterized protein OS=Vitis...    45   0.003
tr|Q650W1|Q650W1_ORYSJ Os09g0565700 protein OS=Oryza sativa subs...    40   0.13 
tr|Q650V6|Q650V6_ORYSJ Putative prephenate dehydratase OS=Oryza ...    40   0.13 
tr|Q0IZJ9|Q0IZJ9_ORYSJ Os09g0566000 protein OS=Oryza sativa subs...    40   0.13 
tr|A3C1K9|A3C1K9_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.13 
tr|A2Z456|A2Z456_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.13 
tr|A2Z452|A2Z452_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.13 
tr|B4J2D7|B4J2D7_DROGR GH15454 (GH23747) OS=Drosophila grimshawi...    39   0.39 
tr|B8LLZ1|B8LLZ1_PICSI Putative uncharacterized protein OS=Picea...    38   0.50 
tr|Q6JJ29|Q6JJ29_IPOTF Prephenate dehydratase (Putative uncharac...    37   0.86 
tr|Q7XLY2|Q7XLY2_ORYSA OSJNBa0042I15.8 protein OS=Oryza sativa G...    37   1.5  
tr|Q0JDF7|Q0JDF7_ORYSJ Os04g0406600 protein OS=Oryza sativa subs...    37   1.5  
tr|Q01L56|Q01L56_ORYSA OSIGBa0142C11.3 protein OS=Oryza sativa G...    37   1.5  
tr|A3ATK7|A3ATK7_ORYSJ Putative uncharacterized protein OS=Oryza...    37   1.5  
tr|A2XT43|A2XT43_ORYSI Putative uncharacterized protein OS=Oryza...    37   1.5  
tr|B6UD01|B6UD01_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.9  
tr|B4FSJ7|B4FSJ7_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.9  
tr|B4FQG2|B4FQG2_MAIZE Putative uncharacterized protein OS=Zea m...    36   2.5  
tr|Q9ZUY3|Q9ZUY3_ARATH Putative chorismate mutase/prephenate deh...    35   3.3  
tr|Q8LAP1|Q8LAP1_ARATH Putative chorismate mutase/prephenate deh...    35   3.3  
tr|A8Q8Z6|A8Q8Z6_BRUMA T-cell receptor beta chain ANA 11, putati...    35   4.3  
tr|B4FGT4|B4FGT4_MAIZE Putative uncharacterized protein OS=Zea m...    35   5.6  
tr|Q15X35|Q15X35_PSEA6 Sensor protein OS=Pseudoalteromonas atlan...    34   7.3  
tr|A8QFD1|A8QFD1_BRUMA T-cell receptor beta chain ANA 11, putati...    34   9.6  

>tr|B5LAT0|B5LAT0_CAPAN Putative arogenate dehydratase OS=Capsicum
           annuum PE=2 SV=1
          Length = 427

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 489 VSSQVGMEGNGHAGXXXXXXXXXXXADLVRINGYDSL-AAPKDLNLPRPLTISDFAPAPM 665
           VS Q   E  G AG            ++  +NG+ SL   P D NLP+PLTI+D +PAPM
Sbjct: 80  VSQQPDTEKTGGAG------------EITVVNGHKSLDLVPIDNNLPKPLTITDLSPAPM 127

Query: 666 HG 671
           HG
Sbjct: 128 HG 129


>tr|A7PQJ0|A7PQJ0_VITVI Chromosome chr6 scaffold_25, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022086001
           PE=4 SV=1
          Length = 398

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 564 ADLVRINGYDSLAAPKDLNLPRPLTISDFAPAPMHG 671
           ADL  +NG+ +L      NLP+PLTI+D +PAPMHG
Sbjct: 78  ADLTAVNGHKTLDLVPIENLPKPLTITDLSPAPMHG 113


>tr|A5BWG3|A5BWG3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041082 PE=4 SV=1
          Length = 411

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 564 ADLVRINGYDSLAAPKDLNLPRPLTISDFAPAPMHG 671
           ADL  +NG+ +L      NLP+PLTI+D +PAPMHG
Sbjct: 78  ADLTAVNGHKTLDLVPIENLPKPLTITDLSPAPMHG 113


>tr|Q650W1|Q650W1_ORYSJ Os09g0565700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0070E11.10 PE=2 SV=1
          Length = 401

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 58  DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 90


>tr|Q650V6|Q650V6_ORYSJ Putative prephenate dehydratase OS=Oryza
           sativa subsp. japonica GN=OSJNBa0070E11.16 PE=4 SV=1
          Length = 407

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 67  DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 99


>tr|Q0IZJ9|Q0IZJ9_ORYSJ Os09g0566000 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0566000 PE=4 SV=1
          Length = 565

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 225 DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 257


>tr|A3C1K9|A3C1K9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_029181 PE=4 SV=1
          Length = 355

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 58  DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 90


>tr|A2Z456|A2Z456_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32428 PE=4 SV=1
          Length = 406

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 66  DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 98


>tr|A2Z452|A2Z452_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32424 PE=4 SV=1
          Length = 401

 Score = 40.0 bits (92), Expect = 0.13
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
 Frame = +3

Query: 591 DSLAAPKDL------NLPRPLTISDFAPAPMHG 671
           D  A P DL      NLPRPLTI+D +PAPMHG
Sbjct: 58  DHAAPPLDLDLLPVSNLPRPLTITDLSPAPMHG 90


>tr|B4J2D7|B4J2D7_DROGR GH15454 (GH23747) OS=Drosophila grimshawi
           GN=GH15454 PE=4 SV=1
          Length = 128

 Score = 38.5 bits (88), Expect = 0.39
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 223 AAGKHTHNVTLQSLRRYRNIHTHTTPQTR-HAHTDHHKTVGVKHRALAFSGIGAP 62
           AA  HTH+ ++     + + H H+ P +  H+H  HH      H A A +G G P
Sbjct: 43  AAAHHTHHASMHPSHHHHHTHPHSHPHSHPHSHHHHHAHSAHHHLAAAAAGGGMP 97