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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963271
Clone id TST39A01NGRL0016_B09
Library
Length 639
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_B09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGGCACTCTCGCATTACCCTCACGCAGACAAGAAGAGAGCTCGAGGCTCATCCATATTC
GCTTCCCCTGCTTCACCGACAAGGAGGCTCTCCCTCCCCCTCACTCTGCGCGAAGACCAC
CATTTCAGCTCCGGTCTTCTTTTTTTGTCTGACTAGCCATGTGTCTATGCCAAAATGGGA
AGGACCTGGAGTCATTGGATCACCATTTGATGAAAGAGAATTCAAGGTTTTAGTAGTATT
TGAATCAGTGGAAAGGCACATGCTTGCCTTAAAAGAGTTTCTGTTCGCTGCTTGTGAGCA
CGTCGCATGCATGGGCACAGTGCTTGTTTTGGGAGCTGTAGCAAGTCCCCTGATGTACTC
TCTGCTGCTGAGCAACCGTCCAAGTTTCCTGATTCGCCAGTTAGACGTGTGAAGGAATTC
TGGGGCTCAAGCTCCAACGAAGGGGAGCTAACAAAGGAGTCCAAGTCATCCCAGAGGAGT
CTTTCTTTTAGCAAGCAAGATCAAAGTGCTGGAAGTTATGAGGCTAAGCTGAGTCCAAGC
AGGGTTGATGGAAATCATGGTTTGGCTCTTTGGATGGAGCAAAGAAGAGAATGGACCAAA
AAGACATCTCAAGCAGTCGCAACCCAGACCCATGAACCT
■■Homology search results ■■ -
sp_hit_id P40021
Definition sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces cerevisiae
Align length 49
Score (bit) 30.4
E-value 8.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963271|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B09, 5'
         (639 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces c...    30   8.1  
sp|A6ZQY2|ZRG8_YEAS7 Zinc-regulated protein 8 OS=Saccharomyces c...    30   8.1  
sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sap...    30   8.1  
sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS...    30   8.1  

>sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces
            cerevisiae GN=ZRG8 PE=1 SV=1
          Length = 1076

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 461  DSFVSSPSLE--LEPQNSFTRLTGESGNLDGCSAAESTSGDLLQLPKQA 321
            D++V SP+L   + P NSFT+ T E  N    S  + T   +   PK+A
Sbjct: 1028 DNYVISPNLPTTITPTNSFTKPTPEFSNDYSLSPIQETPSSVQSSPKRA 1076


>sp|A6ZQY2|ZRG8_YEAS7 Zinc-regulated protein 8 OS=Saccharomyces
            cerevisiae (strain YJM789) GN=ZRG8 PE=2 SV=1
          Length = 1076

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 461  DSFVSSPSLE--LEPQNSFTRLTGESGNLDGCSAAESTSGDLLQLPKQA 321
            D++V SP+L   + P NSFT+ T E  N    S  + T   +   PK+A
Sbjct: 1028 DNYVISPNLPTTITPTNSFTKPTPEFSNDYSLSPIQETPSSVQSSPKRA 1076


>sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens
            GN=DENND4A PE=1 SV=2
          Length = 1863

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
 Frame = -2

Query: 443  PSLELEPQNSFTRLTGESGNLDGCSAAES--TSGDLLQLP--------KQALCPCMRRAH 294
            P L  +  +S  RLTG S N  G  + ES  ++ +LL +         +     C R+ H
Sbjct: 954  PKLSYQNSSSIVRLTGTSNNSAGKISGESMESTPELLLISSLEDTNETRNIQSRCFRKRH 1013

Query: 293  KQRTETLLRQ 264
            K   ET L+Q
Sbjct: 1014 KSDNETNLQQ 1023


>sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B
           OS=Dictyostelium discoideum GN=gxcB PE=2 SV=1
          Length = 1198

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = -3

Query: 460 TPLLAPLRWSLSPRIPSHV*LANQETWTVAQQQRVHQGTCYSSQNKHCAHACDVLTSSEQ 281
           +PL++PL  S SP + S    +N    T  QQQ+ HQG   S Q K    +C  LT   +
Sbjct: 64  SPLISPLSSSPSPLLSSS---SNSIQSTSHQQQQQHQGVITSLQMK---PSCTSLTDDIE 117

Query: 280 K 278
           K
Sbjct: 118 K 118
tr_hit_id O65047
Definition tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07 OS=Picea mariana
Align length 118
Score (bit) 52.8
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963271|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B09, 5'
         (639 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07 OS=...    53   2e-05
tr|A9NNV5|A9NNV5_PICSI Putative uncharacterized protein OS=Picea...    53   2e-05
tr|A9NZS2|A9NZS2_PICSI Putative uncharacterized protein OS=Picea...    42   0.032
tr|Q942R8|Q942R8_ORYSJ cDNA clone:001-207-E01, full insert seque...    41   0.054
tr|B8ADH6|B8ADH6_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.054
tr|A2ZPS6|A2ZPS6_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.054
tr|Q84JY4|Q84JY4_ARATH Putative uncharacterized protein At5g2536...    40   0.16 
tr|A9TXX2|A9TXX2_PHYPA Predicted protein (Fragment) OS=Physcomit...    40   0.16 
tr|A9NZA2|A9NZA2_PICSI Putative uncharacterized protein OS=Picea...    40   0.16 
tr|A9PBG2|A9PBG2_POPTR Putative uncharacterized protein OS=Popul...    39   0.21 
tr|B6U2Q4|B6U2Q4_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.27 
tr|A1XM03|A1XM03_TOBAC Putative uncharacterized protein (Fragmen...    39   0.35 
tr|A9PGA0|A9PGA0_POPTR Putative uncharacterized protein OS=Popul...    38   0.46 
tr|A9RUT4|A9RUT4_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.78 
tr|Q9DUH8|Q9DUH8_9VIRU DNA, complete genome, isolate: s-TTV CH65...    37   1.3  
tr|A9PDE9|A9PDE9_POPTR Putative uncharacterized protein OS=Popul...    36   2.3  
tr|Q4R6I7|Q4R6I7_MACFA Testis cDNA, clone: QtsA-17929, similar t...    34   8.6  
tr|B4L4Y1|B4L4Y1_DROMO GI14769 OS=Drosophila mojavensis GN=GI147...    34   8.6  

>tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07
           OS=Picea mariana GN=Sb07 PE=2 SV=1
          Length = 158

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
 Frame = +1

Query: 307 MHGHSACFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXX 468
           MHG+S C G C+K P  + A ++PSK      R +K      +FW SS+NE +       
Sbjct: 1   MHGNSGCLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQS 58

Query: 469 XXXXXXXXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEP 639
                     +Q++ S  A  + +  +  NH L LW E R++W     +  A Q  EP
Sbjct: 59  QRSVSSISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREP 116


>tr|A9NNV5|A9NNV5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 158

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
 Frame = +1

Query: 307 MHGHSACFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXX 468
           MHG+S C G C+K P  + A ++PSK      R +K      +FW SS+NE +       
Sbjct: 1   MHGNSGCLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQS 58

Query: 469 XXXXXXXXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEP 639
                     +Q++ S  A  + +  +  NH L LW E R++W     +  A Q  EP
Sbjct: 59  QRSVSSISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREP 116


>tr|A9NZS2|A9NZS2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 172

 Score = 42.0 bits (97), Expect = 0.032
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXXXXXXXX 486
           C G C+K P  + A ++PSK      R +K      +FW SS+NE +             
Sbjct: 21  CLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQSQRSVSS 78

Query: 487 XXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEP 639
               +Q++ S  A  + +  +  NH L LW E R++W     +    Q  EP
Sbjct: 79  ISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHTRQLREP 130


>tr|Q942R8|Q942R8_ORYSJ cDNA clone:001-207-E01, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0583G08.31 PE=2 SV=1
          Length = 186

 Score = 41.2 bits (95), Expect = 0.054
 Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 504
           CFG C K+   +    +    PD       E W +++ E E +                Q
Sbjct: 54  CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 102

Query: 505 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEP 639
             GS +    P+    NHGL LW E R++WT KT Q   T Q  EP
Sbjct: 103 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREP 144


>tr|B8ADH6|B8ADH6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00587 PE=4 SV=1
          Length = 184

 Score = 41.2 bits (95), Expect = 0.054
 Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 504
           CFG C K+   +    +    PD       E W +++ E E +                Q
Sbjct: 52  CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 100

Query: 505 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEP 639
             GS +    P+    NHGL LW E R++WT KT Q   T Q  EP
Sbjct: 101 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREP 142


>tr|A2ZPS6|A2ZPS6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000548 PE=4 SV=1
          Length = 189

 Score = 41.2 bits (95), Expect = 0.054
 Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 504
           CFG C K+   +    +    PD       E W +++ E E +                Q
Sbjct: 57  CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 105

Query: 505 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEP 639
             GS +    P+    NHGL LW E R++WT KT Q   T Q  EP
Sbjct: 106 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREP 147


>tr|Q84JY4|Q84JY4_ARATH Putative uncharacterized protein At5g25360
           OS=Arabidopsis thaliana GN=At5g25360 PE=2 SV=1
          Length = 169

 Score = 39.7 bits (91), Expect = 0.16
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXXXXXXXX 486
           CFG C+K P ++ A ++PSK      R VK      +FW +S+ E + +           
Sbjct: 21  CFGCCNKPP-LIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 487 XXXQDQSAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVATQTHEP 639
               + S     A  S      NHGL LW + R++W    +     +  EP
Sbjct: 80  SFTNNTSTS---ASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVREP 127


>tr|A9TXX2|A9TXX2_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_152428 PE=4 SV=1
          Length = 156

 Score = 39.7 bits (91), Expect = 0.16
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
 Frame = +1

Query: 319 SACFGSCSKSPDVLSAAEQPSKFPDSP----------VRRVKEFWGSSSNEGELTXXXXX 468
           S C G+C+K P    + +  S+ P S           V++ +++W +SSNE E       
Sbjct: 2   SGCLGACAKPPPPTPSDKLVSRRPRSSKCRARVRGHIVKQPRDWWTTSSNEME--NHNTL 59

Query: 469 XXXXXXXXXQDQSAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVATQTHEP 639
                     D  AG+     + +    NH LALW +QR  W       V TQ   P
Sbjct: 60  DAGPPQNVPSDHGAGT-----ASNTAYSNHALALWNQQRSAW-------VGTQPRPP 104


>tr|A9NZA2|A9NZA2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 212

 Score = 39.7 bits (91), Expect = 0.16
 Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 8/132 (6%)
 Frame = +1

Query: 268 LKRVSVRCL*ARRMHGHSACFGSCSKSPDVL----SAAEQPSKFPDSPVRRVKEFWGSSS 435
           L  VS  C+          C G C+K P       S+   PS+   S +  +K+ W SSS
Sbjct: 48  LSSVSCACM--------GGCVGGCAKPPPATTVERSSRRHPSRRGVSGLFLLKKDWWSSS 99

Query: 436 NEGELTXXXXXXXXXXXXXXQDQSAGSYEAKLSPSRVDG----NHGLALWMEQRREWTKK 603
            E ++                  ++ + E +L+    +     NH L +W E+RREW   
Sbjct: 100 PE-DMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWLGN 158

Query: 604 TSQAVATQTHEP 639
            SQ       EP
Sbjct: 159 RSQNQPQMPREP 170


>tr|A9PBG2|A9PBG2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 172

 Score = 39.3 bits (90), Expect = 0.21
 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
 Frame = +1

Query: 325 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKE------FWGSSSNEGELTXXXXXXXXXXX 486
           CFG C+K P ++ A +  SK      R VK+      FW +S+ + E +           
Sbjct: 21  CFGCCAKPPTII-AIDASSKGLRVQKRSVKKSSKSNNFWSTSAGDMENSTMHSQGSLSSI 79

Query: 487 XXXQDQSAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVATQTHEP 639
                Q   S     S S    N GL LW + R++W          Q  EP
Sbjct: 80  STLNQQLDPSNAGSTSNSSEFVNRGLLLWNQTRQQWLGNKKTQNRKQVREP 130