NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963281
Clone id TST39A01NGRL0016_B21
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_B21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AACTTGGCATCGCATCCTGAGCAGAGTAGAGCAGACCAAAGTTTTGTATCTCTAGGGTTT
TCTGCTTGCCATAAAAGTTCAAGACAAGCTTGGCTACTTCCATGGCTGCCTCGACTTGCG
ATTCTCTCCTGCGCCTTCACTCATCTTCGCTTGTATCCGACTCACATGATCTCAACCATG
GCGGCAGAGGCAGCTTCCTTGGGGCAAGGCTCTCCACAGATCTCATGGGTTCTACAGAGC
TTGCAAGCAAAGGACAACATTCTGTTCGAAGGAACTATGAAGTTTTTGCAGTTTCTTCTG
CTCCCACTCCGTTGAGAAATACGACCTCAACAAAACGAACTCTCTTGAAGCGCCGCGATT
CTTTGGAAAATGCATATGTGAATAGTCCTATGGAAGATAAGTCTAGCACAGCTATGGATG
TACTGGACTTGGAGAGAGGAGTGTGTATTCCATTTAGGAAGTACACACCAGAAGGGGTTC
GGCAAAAGGTTTTAGATACACCAGGGGCTTTTTTCTCTGTGGTCTCACGTGGTGCAGAGA
TTCTGTTGAAAATGGGTTATTATTGGGCCAGCCTTTCTTATGACTGTCTTATTGGGAAAG
GTGAAGAAATGGTGCCCTACAGGGCTGAGCAGCTGAGGAACTTGCTGTGTGATCTTG
■■Homology search results ■■ -
sp_hit_id Q8RWG1
Definition sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana
Align length 86
Score (bit) 120.0
E-value 8.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963281|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B21, 5'
         (657 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing pro...   120   8e-27
sp|Q6XZ05|MRAZ_SPIKU Protein mraZ OS=Spiroplasma kunkelii GN=mra...    35   0.46 
sp|Q29527|C11B1_PAPHU Cytochrome P450 11B1, mitochondrial OS=Pap...    32   2.2  
sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus...    32   3.9  
sp|Q8N8Z3|CJ108_HUMAN Putative uncharacterized protein C10orf108...    32   3.9  

>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing
           protein kinase At4g31390, chloroplastic OS=Arabidopsis
           thaliana GN=At4g31390 PE=1 SV=1
          Length = 682

 Score =  120 bits (300), Expect = 8e-27
 Identities = 54/86 (62%), Positives = 73/86 (84%)
 Frame = +3

Query: 399 KSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLS 578
           KSS+A++ LD+ERGVC+PFRKY+PE VR KVL++ GA  S+VSRG EI+  +G YW++L+
Sbjct: 92  KSSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLT 151

Query: 579 YDCLIGKGEEMVPYRAEQLRNLLCDL 656
           YD L+G+ EE+VP+RA QLRNLLC+L
Sbjct: 152 YDFLVGRDEEVVPFRARQLRNLLCNL 177


>sp|Q6XZ05|MRAZ_SPIKU Protein mraZ OS=Spiroplasma kunkelii GN=mraZ
           PE=3 SV=1
          Length = 143

 Score = 34.7 bits (78), Expect = 0.46
 Identities = 24/74 (32%), Positives = 35/74 (47%)
 Frame = +1

Query: 19  EQSRADQSFVSLGFSACHKSSRQAWLLPWLPRLAILSCAFTHLRLYPTHMISTMAAEAAS 198
           EQ + D+ F+SLGF  C     +A  L W  ++A    A    R   T  I +M+ E   
Sbjct: 25  EQFKDDKVFISLGFDGCVDVRNEAEWLKWTEKVASTGQATAEGRAL-TRKIMSMSDETTF 83

Query: 199 LGQGSPQISWVLQS 240
              G  +IS +LQ+
Sbjct: 84  DNAGRIKISSILQN 97


>sp|Q29527|C11B1_PAPHU Cytochrome P450 11B1, mitochondrial OS=Papio
           hamadryas ursinus GN=CYP11B1 PE=3 SV=1
          Length = 503

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 256 CPLLASSVEPMRSVESLAPRKLPLPPWL 173
           C +L   VE ++ V+SL PR++ L PW+
Sbjct: 90  CVMLPEDVEKLQQVDSLNPRRMSLEPWV 117


>sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus
           marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf
           PE=3 SV=1
          Length = 425

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 157 PTHMISTMAAEAASLGQGSPQISWVLQSLQ 246
           P H+I +   EA S G+GS + +WV+ SL+
Sbjct: 35  PPHIIESFRKEAESKGKGSFEFAWVMDSLK 64


>sp|Q8N8Z3|CJ108_HUMAN Putative uncharacterized protein C10orf108
           OS=Homo sapiens GN=C10orf108 PE=2 SV=1
          Length = 221

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 27/89 (30%), Positives = 36/89 (40%)
 Frame = -1

Query: 624 PCRAPFLHLSQ*DSHKKGWPNNNPFSTESLHHVRPQRKKPLVYLKPFAEPLLVCTS*MEY 445
           PCR P LH S   S K G   +       L    P  +KPL  L P   P LV  +  + 
Sbjct: 118 PCRTPRLHSSGCFSSKAGTALSPSLPVPGLRPQPPFLQKPLSILAPATPPALVSPTPPK- 176

Query: 444 TLLSPSPVHP*LC*TYLP*DYSHMHFPKN 358
             LSP  + P     +      H+H P++
Sbjct: 177 --LSPGQLSPHSVNVHWG-PQGHLHLPRS 202
tr_hit_id A9T844
Definition tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 90
Score (bit) 135.0
E-value 2.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963281|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_B21, 5'
         (657 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella paten...   135   2e-30
tr|A7P4Z2|A7P4Z2_VITVI Chromosome chr4 scaffold_6, whole genome ...   124   5e-27
tr|Q2R8U3|Q2R8U3_ORYSJ ABC1 family protein, expressed OS=Oryza s...   121   4e-26
tr|Q0ITU3|Q0ITU3_ORYSJ Os11g0216300 protein (Fragment) OS=Oryza ...   121   4e-26
tr|B8BJP9|B8BJP9_ORYSI Putative uncharacterized protein OS=Oryza...   121   4e-26
tr|Q2V3D3|Q2V3D3_ARATH Uncharacterized protein At4g31390.2 OS=Ar...   120   1e-25
tr|A3C9R5|A3C9R5_ORYSJ Putative uncharacterized protein OS=Oryza...   113   1e-23
tr|A8HTY7|A8HTY7_CHLRE Ser/thr kinase, ABC1 family OS=Chlamydomo...    48   6e-04
tr|Q2JU93|Q2JU93_SYNJA ABC1 domain protein OS=Synechococcus sp. ...    39   0.28 
tr|Q01FN3|Q01FN3_OSTTA Predicted unusual protein kinase (ISS) OS...    38   0.62 
tr|A4RRY7|A4RRY7_OSTLU Predicted protein OS=Ostreococcus lucimar...    38   0.62 
tr|B8HWD2|B8HWD2_9CHRO ABC-1 domain protein OS=Cyanothece sp. PC...    35   5.3  
tr|Q14NL7|Q14NL7_SPICI Conserved hypothetical upf0040 protein OS...    35   5.3  
tr|Q8DID0|Q8DID0_THEEB Tlr1660 protein OS=Thermosynechococcus el...    34   6.9  
tr|B3P879|B3P879_DROER GG11518 OS=Drosophila erecta GN=GG11518 P...    34   9.0  

>tr|A9T844|A9T844_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_141723 PE=4 SV=1
          Length = 596

 Score =  135 bits (340), Expect = 2e-30
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = +3

Query: 387 PMEDKSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYW 566
           P    +S AM+ L+LERGVC PFRKYTP+ VRQ+VL TPGA FSVV RG EI+ K+G+YW
Sbjct: 3   PTVTSTSGAMEELELERGVCNPFRKYTPDRVRQRVLGTPGALFSVVGRGVEIITKLGFYW 62

Query: 567 ASLSYDCLIGKGEEMVPYRAEQLRNLLCDL 656
           A+LSYDCL+G+GEEMVP RA QLR LLCDL
Sbjct: 63  ANLSYDCLVGRGEEMVPKRAAQLRTLLCDL 92


>tr|A7P4Z2|A7P4Z2_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032339001
           PE=4 SV=1
          Length = 662

 Score =  124 bits (311), Expect = 5e-27
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +3

Query: 402 SSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSY 581
           SS+AM+ LD+ERGVC PFRKYTPE VR KVL++ G   S+V RG EI+  +G YW++L Y
Sbjct: 65  SSSAMEQLDIERGVCFPFRKYTPETVRNKVLESRGQILSLVGRGVEIVWNLGLYWSTLMY 124

Query: 582 DCLIGKGEEMVPYRAEQLRNLLCDL 656
           DCL+G+ EE+VPYRA QLRNLLCDL
Sbjct: 125 DCLVGRDEEVVPYRARQLRNLLCDL 149


>tr|Q2R8U3|Q2R8U3_ORYSJ ABC1 family protein, expressed OS=Oryza
           sativa subsp. japonica GN=LOC_Os11g11000 PE=2 SV=1
          Length = 675

 Score =  121 bits (303), Expect = 4e-26
 Identities = 55/87 (63%), Positives = 71/87 (81%)
 Frame = +3

Query: 396 DKSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASL 575
           DK S+A++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L
Sbjct: 74  DKPSSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSAL 133

Query: 576 SYDCLIGKGEEMVPYRAEQLRNLLCDL 656
            YD L+G+ EE+VP+RA QLRNLLCDL
Sbjct: 134 MYDFLVGRDEEIVPFRARQLRNLLCDL 160


>tr|Q0ITU3|Q0ITU3_ORYSJ Os11g0216300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os11g0216300 PE=4 SV=1
          Length = 734

 Score =  121 bits (303), Expect = 4e-26
 Identities = 55/87 (63%), Positives = 71/87 (81%)
 Frame = +3

Query: 396 DKSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASL 575
           DK S+A++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L
Sbjct: 133 DKPSSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSAL 192

Query: 576 SYDCLIGKGEEMVPYRAEQLRNLLCDL 656
            YD L+G+ EE+VP+RA QLRNLLCDL
Sbjct: 193 MYDFLVGRDEEIVPFRARQLRNLLCDL 219


>tr|B8BJP9|B8BJP9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35541 PE=4 SV=1
          Length = 709

 Score =  121 bits (303), Expect = 4e-26
 Identities = 55/87 (63%), Positives = 71/87 (81%)
 Frame = +3

Query: 396 DKSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASL 575
           DK S+A++ LD+ERGVCIPFRKYTPE VR +VL + G+  S+ SRG EI+ K+G YW++L
Sbjct: 108 DKPSSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSAL 167

Query: 576 SYDCLIGKGEEMVPYRAEQLRNLLCDL 656
            YD L+G+ EE+VP+RA QLRNLLCDL
Sbjct: 168 MYDFLVGRDEEIVPFRARQLRNLLCDL 194


>tr|Q2V3D3|Q2V3D3_ARATH Uncharacterized protein At4g31390.2
           OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1
          Length = 657

 Score =  120 bits (300), Expect = 1e-25
 Identities = 54/86 (62%), Positives = 73/86 (84%)
 Frame = +3

Query: 399 KSSTAMDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLS 578
           KSS+A++ LD+ERGVC+PFRKY+PE VR KVL++ GA  S+VSRG EI+  +G YW++L+
Sbjct: 92  KSSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLT 151

Query: 579 YDCLIGKGEEMVPYRAEQLRNLLCDL 656
           YD L+G+ EE+VP+RA QLRNLLC+L
Sbjct: 152 YDFLVGRDEEVVPFRARQLRNLLCNL 177


>tr|A3C9R5|A3C9R5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032037 PE=4 SV=1
          Length = 708

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 11/98 (11%)
 Frame = +3

Query: 396 DKSSTAMDVLDLERGVCIPFRKYTPE-----------GVRQKVLDTPGAFFSVVSRGAEI 542
           DK S+A++ LD+ERGVCIPFRKYTPE            VR +VL + G+  S+ SRG EI
Sbjct: 126 DKPSSALEQLDIERGVCIPFRKYTPEMVLNTSNGYIYRVRNRVLGSRGSVLSLASRGVEI 185

Query: 543 LLKMGYYWASLSYDCLIGKGEEMVPYRAEQLRNLLCDL 656
           + K+G YW++L YD L+G+ EE+VP+RA QLRNLLCDL
Sbjct: 186 IWKLGLYWSALMYDFLVGRDEEIVPFRARQLRNLLCDL 223


>tr|A8HTY7|A8HTY7_CHLRE Ser/thr kinase, ABC1 family OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_113847 PE=4 SV=1
          Length = 596

 Score = 47.8 bits (112), Expect = 6e-04
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = +3

Query: 423 LDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLIGKG 602
           L++E+ +C    KY+P+ V+ +VL  PG    V  R AEI  ++ ++ A+L  D L+G  
Sbjct: 16  LEMEKDICNIISKYSPDYVKSRVLRGPGDAALVALRIAEITARVSWFTATLYADRLMGHE 75

Query: 603 E--EMVPYRAEQLRNLL 647
           +  E V  RA +LR LL
Sbjct: 76  DTPERVRLRAAELRELL 92


>tr|Q2JU93|Q2JU93_SYNJA ABC1 domain protein OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=CYA_1563 PE=4 SV=1
          Length = 590

 Score = 38.9 bits (89), Expect = 0.28
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = +3

Query: 519 VVSRGAEILLKMGYYWASLSYDCLIGKGEEMVPYRAEQLRNLLCDL 656
           V+ R   IL  + ++   L +D L G+G+  VP RAEQLR LL DL
Sbjct: 30  VMGRALAILWPLLWFVLCLRWDQLWGQGDRKVPQRAEQLRKLLTDL 75


>tr|Q01FN3|Q01FN3_OSTTA Predicted unusual protein kinase (ISS)
            OS=Ostreococcus tauri GN=Ot01g05460 PE=4 SV=1
          Length = 1592

 Score = 37.7 bits (86), Expect = 0.62
 Identities = 25/81 (30%), Positives = 40/81 (49%)
 Frame = +3

Query: 414  MDVLDLERGVCIPFRKYTPEGVRQKVLDTPGAFFSVVSRGAEILLKMGYYWASLSYDCLI 593
            ++ L ++ G C    KY+P  +R++ L  P        R AEIL+    + + L+ D   
Sbjct: 1025 VEELAMQSGACAIAPKYSPGEIRRRALRDPLEATKTALRCAEILMNAATFTSGLALDAFY 1084

Query: 594  GKGEEMVPYRAEQLRNLLCDL 656
               +E V  R+EQLR  L +L
Sbjct: 1085 --EQEKVVSRSEQLRVQLANL 1103