DK963287 |
Clone id |
TST39A01NGRL0016_C03 |
Library |
TST39 |
Length |
636 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_C03. 5' end sequence. |
Accession |
DK963287 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3608Contig1 |
Sequence |
AACAGCCATGGCGTACTGTCTGGTTCAACTCTCGTTTCCTGCAGCTTCATCATGCCGACA AGCCCATCACACTCTCACTTCGATCAGATTGAGTGGAGCTCAGCCCAAGACTGTCCGGTT CAATGGAACCTTCAACACCAGAAGAAATATTCCGAGCCTGCTCGTGGAAGCAAGGGCTGG CAAGAATGTCAAAACAGCTAAAGAGACCATTGTTCCAGAATCTGATTACAGAATACCGAT TGTCCTTCTAGGTGGTGCAGCTGCATTGGTTTATGCAGACAATATGTTGGCTGCAGCACC CGTGGGTCTCCTTGGGTTGTTATTGCTTTTCCAGACTACTCGTGTTCGGTTTGTGTTTGA CGATGAAGCGTTGGAAGTAAAAGTTGGCGAGGAACTCACAGAATCTGGAGAGAATGTTTT TGTTGGGGGCAAAAACAGATGGAAGTATTCCACCTTCGTTAATTGGGAGATGTGGTGGCC CAATTTTCCAGTTCTTGTTTACTTCAAAGAGACTCAAACAAAACCTGATGGCCAAGTCCA CTTTTTTCCTGTGATTTTTAATGGAAAGCAGCTATATGATGTAATGGTCGAGCGAGCAGG GCGATCGGTAAACAGTTTACCAAAGTAACTGTCTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8WXH2 |
Definition |
sp|Q8WXH2|JPH3_HUMAN Junctophilin-3 OS=Homo sapiens |
Align length |
45 |
Score (bit) |
32.0 |
E-value |
2.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0DIC2 |
Definition |
tr|Q0DIC2|Q0DIC2_ORYSJ Os05g0401200 protein OS=Oryza sativa subsp. japonica |
Align length |
149 |
Score (bit) |
224.0 |
E-value |
3.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963287|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_C03, 5' (636 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0DIC2|Q0DIC2_ORYSJ Os05g0401200 protein OS=Oryza sativa subs... 224 3e-57 tr|A2Y4H0|A2Y4H0_ORYSI Putative uncharacterized protein OS=Oryza... 224 3e-57 tr|B6TPB1|B6TPB1_MAIZE Putative uncharacterized protein OS=Zea m... 224 3e-57 tr|A9NLB2|A9NLB2_PICSI Putative uncharacterized protein OS=Picea... 222 2e-56 tr|A9SGC1|A9SGC1_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|A7PF34|A7PF34_VITVI Chromosome chr11 scaffold_13, whole genom... 214 3e-54 tr|B6T536|B6T536_MAIZE Putative uncharacterized protein OS=Zea m... 197 6e-49 tr|A8I7F2|A8I7F2_CHLRE Predicted protein OS=Chlamydomonas reinha... 152 2e-35 tr|Q00Z75|Q00Z75_OSTTA Chromosome 11 contig 1, DNA sequence. (Fr... 113 8e-24 tr|A4S4G1|A4S4G1_OSTLU Predicted protein OS=Ostreococcus lucimar... 112 2e-23 tr|B8C1Y9|B8C1Y9_THAPS Predicted protein OS=Thalassiosira pseudo... 99 2e-19 tr|B8BQR9|B8BQR9_THAPS Predicted protein OS=Thalassiosira pseudo... 74 7e-12 tr|B7G457|B7G457_PHATR Predicted protein OS=Phaeodactylum tricor... 74 1e-11 tr|A5GR70|A5GR70_SYNR3 Uncharacterized conserved membrane protei... 58 4e-07 tr|B8C1Y6|B8C1Y6_THAPS Putative uncharacterized protein OS=Thala... 57 7e-07 tr|Q10ZX4|Q10ZX4_TRIEI Putative uncharacterized protein OS=Trich... 55 3e-06 tr|B4VMR8|B4VMR8_9CYAN Putative uncharacterized protein OS=Micro... 55 5e-06 tr|A0YZ83|A0YZ83_9CYAN Putative uncharacterized protein OS=Lyngb... 54 6e-06 tr|Q8DJW2|Q8DJW2_THEEB Tll1109 protein OS=Thermosynechococcus el... 54 1e-05 tr|Q2JPE8|Q2JPE8_SYNJB Putative uncharacterized protein OS=Synec... 53 2e-05 tr|B7JUX2|B7JUX2_SYNP8 Putative uncharacterized protein OS=Synec... 52 4e-05 tr|B4BY74|B4BY74_9CHRO Putative uncharacterized protein OS=Cyano... 52 4e-05 tr|A0ZE55|A0ZE55_NODSP Putative uncharacterized protein OS=Nodul... 51 5e-05 tr|B8HRY6|B8HRY6_9CHRO Putative uncharacterized protein OS=Cyano... 51 7e-05 tr|B7KGU4|B7KGU4_9CHRO Putative uncharacterized protein OS=Cyano... 51 7e-05 tr|Q3MCH8|Q3MCH8_ANAVT Putative uncharacterized protein OS=Anaba... 50 9e-05 tr|Q4C1W4|Q4C1W4_CROWT Putative uncharacterized protein OS=Croco... 50 9e-05 tr|Q5N2Z5|Q5N2Z5_SYNP6 Putative uncharacterized protein OS=Synec... 50 1e-04 tr|Q31RA8|Q31RA8_SYNE7 Putative uncharacterized protein OS=Synec... 50 1e-04 tr|B4WRZ9|B4WRZ9_9SYNE Putative uncharacterized protein OS=Synec... 50 1e-04
>tr|Q0DIC2|Q0DIC2_ORYSJ Os05g0401200 protein OS=Oryza sativa subsp. japonica GN=Os05g0401200 PE=4 SV=1 Length = 187
Score = 224 bits (572), Expect = 3e-57 Identities = 107/149 (71%), Positives = 120/149 (80%) Frame = +2
Query: 179 GKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTTRVRFVF 358 G+ KT +ETIVP+ DYR+PI YADN+LAAAPV FQTTRVRFVF Sbjct: 40 GRKSKT-RETIVPDPDYRLPIVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVF 98
Query: 359 DDEALEVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQV 538 DDEALEVKVG++L ESGENVFVGGKNRW+YSTFVNWE+WWP FP+LVYFKETQTKP+GQ+ Sbjct: 99 DDEALEVKVGDQLEESGENVFVGGKNRWRYSTFVNWELWWPQFPILVYFKETQTKPEGQI 158
Query: 539 HFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 HFFPVIFNG+QLYD MVERAG S S PK Sbjct: 159 HFFPVIFNGRQLYDAMVERAGPSETSGPK 187
>tr|A2Y4H0|A2Y4H0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19899 PE=4 SV=1 Length = 187
Score = 224 bits (572), Expect = 3e-57 Identities = 107/149 (71%), Positives = 120/149 (80%) Frame = +2
Query: 179 GKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTTRVRFVF 358 G+ KT +ETIVP+ DYR+PI YADN+LAAAPV FQTTRVRFVF Sbjct: 40 GRKSKT-RETIVPDPDYRLPIVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVF 98
Query: 359 DDEALEVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQV 538 DDEALEVKVG++L ESGENVFVGGKNRW+YSTFVNWE+WWP FP+LVYFKETQTKP+GQ+ Sbjct: 99 DDEALEVKVGDQLEESGENVFVGGKNRWRYSTFVNWELWWPQFPILVYFKETQTKPEGQI 158
Query: 539 HFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 HFFPVIFNG+QLYD MVERAG S S PK Sbjct: 159 HFFPVIFNGRQLYDAMVERAGPSETSGPK 187
>tr|B6TPB1|B6TPB1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 163
Score = 224 bits (571), Expect = 3e-57 Identities = 106/144 (73%), Positives = 118/144 (81%) Frame = +2
Query: 194 TAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTTRVRFVFDDEAL 373 TA+ T+VP+ DYR+PI YADN+LAAAPV FQTTRVRFVFD+EAL Sbjct: 20 TARATVVPDPDYRLPIAILGIASAFAYADNLLAAAPVGLLGLLLLFQTTRVRFVFDNEAL 79
Query: 374 EVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPV 553 EVKVGE+L ESGENVFVGGKNRWKYSTFVNWE+WWP FPVLVYFKETQTKP+GQ+HFFPV Sbjct: 80 EVKVGEQLQESGENVFVGGKNRWKYSTFVNWELWWPQFPVLVYFKETQTKPEGQIHFFPV 139
Query: 554 IFNGKQLYDVMVERAGRSVNSLPK 625 IF+G+QLYDVMVERAG S S PK Sbjct: 140 IFDGRQLYDVMVERAGPSKTSGPK 163
>tr|A9NLB2|A9NLB2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 220
Score = 222 bits (565), Expect = 2e-56 Identities = 104/156 (66%), Positives = 122/156 (78%) Frame = +2
Query: 158 LLVEARAGKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQT 337 ++VEA G+ T +ET++P+ DYRIP+ Y DN+L AAP+ QT Sbjct: 66 VVVEALIGRKT-TKRETVIPDPDYRIPVILSGLAGALIYRDNILLAAPIGLLGVLLFVQT 124
Query: 338 TRVRFVFDDEALEVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQ 517 TRVRFVFDDE LEV+VG+EL ESG+N FVGGKN+WK+STFVNWE+WWPNFP+LVYFKETQ Sbjct: 125 TRVRFVFDDETLEVRVGDELEESGQNAFVGGKNKWKFSTFVNWELWWPNFPILVYFKETQ 184
Query: 518 TKPDGQVHFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 TKP+GQVHFFPVIFNGKQLYDVMVERAG S NS PK Sbjct: 185 TKPEGQVHFFPVIFNGKQLYDVMVERAGPSKNSGPK 220
>tr|A9SGC1|A9SGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233279 PE=4 SV=1 Length = 223
Score = 216 bits (549), Expect = 1e-54 Identities = 102/160 (63%), Positives = 118/160 (73%) Frame = +2
Query: 146 NIPSLLVEARAGKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXX 325 N+ + + ++ KT + T++P+ DYRIPI Y DN+L AAP+ Sbjct: 63 NVTTTALFGKSKATPKTTRATVIPDPDYRIPIILLGTAGALLYQDNLLPAAPIGLLGLLL 122
Query: 326 XFQTTRVRFVFDDEALEVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYF 505 QTTRVRFVFDDE LEVKVG+EL ESGENVFVGGKNRW YS+FVNWE+WWP FPVLVYF Sbjct: 123 LVQTTRVRFVFDDEGLEVKVGKELDESGENVFVGGKNRWSYSSFVNWELWWPIFPVLVYF 182
Query: 506 KETQTKPDGQVHFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 KETQTKP+GQ+HFFPVIFNG QLYDVMVERAG S S PK Sbjct: 183 KETQTKPEGQIHFFPVIFNGNQLYDVMVERAGPSKTSGPK 222
>tr|A7PF34|A7PF34_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016891001 PE=4 SV=1 Length = 208
Score = 214 bits (546), Expect = 3e-54 Identities = 104/155 (67%), Positives = 120/155 (77%) Frame = +2
Query: 161 LVEARAGKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTT 340 +V + G+ VK +ET++P+ DYRI Y +N+L AAPV QT+ Sbjct: 55 VVASVLGQKVKN-RETVIPDPDYRIASVLLGLSGGLIYTNNLLPAAPVGLLGLLLLVQTS 113
Query: 341 RVRFVFDDEALEVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQT 520 RVRFVFD+EALEVKVGE+L ESGENVFVGGKNRWKYSTFVNWE+WWPNFP+LVYFKETQT Sbjct: 114 RVRFVFDNEALEVKVGEQLQESGENVFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQT 173
Query: 521 KPDGQVHFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 +P+GQVHFFPVIFNGKQLYDVMVERAG S S PK Sbjct: 174 RPEGQVHFFPVIFNGKQLYDVMVERAGPSKTSGPK 208
>tr|B6T536|B6T536_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 199
Score = 197 bits (500), Expect = 6e-49 Identities = 91/130 (70%), Positives = 103/130 (79%) Frame = +2
Query: 194 TAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTTRVRFVFDDEAL 373 TA+ T+VP+ DYR+PI YADN+LAAAPV FQTTRVRFVFD+EAL Sbjct: 68 TARATVVPDPDYRLPIAILGIASAFAYADNLLAAAPVGLLGLLLLFQTTRVRFVFDNEAL 127
Query: 374 EVKVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDGQVHFFPV 553 EVKVGE+L ESGENVFVGGKNRWKYSTFVNWE+WWP FPVLVYFKETQTKP+GQ+HFFPV Sbjct: 128 EVKVGEQLQESGENVFVGGKNRWKYSTFVNWELWWPQFPVLVYFKETQTKPEGQIHFFPV 187
Query: 554 IFNGKQLYDV 583 IF + D+ Sbjct: 188 IFVSSSIVDL 197
>tr|A8I7F2|A8I7F2_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_182514 PE=4 SV=1 Length = 189
Score = 152 bits (383), Expect = 2e-35 Identities = 77/151 (50%), Positives = 96/151 (63%), Gaps = 1/151 (0%) Frame = +2
Query: 176 AGKNVKTAKETIVPESDYRIPIXXXXXXXXXXYADNMLAAAPVXXXXXXXXFQTTRVRFV 355 A K VK +ET+ PE + + + Y +N + Q TR+RFV Sbjct: 45 APKAVK--RETLAPEPSFNLQLGLLGLSGVSCYYENYGLGGFLGLLGIFLTIQATRIRFV 102
Query: 356 FDDEALEV-KVGEELTESGENVFVGGKNRWKYSTFVNWEMWWPNFPVLVYFKETQTKPDG 532 FDD LEV + G+E ENV VGG+NRW+YS+F+NWE W+P FPVLVYFKE QTKP+G Sbjct: 103 FDDTGLEVLRAGQE----SENVIVGGRNRWEYSSFINWEFWFPGFPVLVYFKENQTKPEG 158
Query: 533 QVHFFPVIFNGKQLYDVMVERAGRSVNSLPK 625 QVHFFP+IFNGKQLY+ MVER G + S PK Sbjct: 159 QVHFFPIIFNGKQLYEAMVERCGPTKTSGPK 189
>tr|Q00Z75|Q00Z75_OSTTA Chromosome 11 contig 1, DNA sequence. (Fragment) OS=Ostreococcus tauri GN=Ot11g00790 PE=4 SV=1 Length = 186
Score = 113 bits (283), Expect = 8e-24 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 12/110 (10%) Frame = +2
Query: 329 FQTTRVRFVFDDEALEVKVGE-----------ELTESGENVFVGG-KNRWKYSTFVNWEM 472 FQ +RVRF F EA+EV E ++ SG+N GG +NRW Y + NWE Sbjct: 33 FQASRVRFRFTREAIEVVFIEPGASDETAANVDVATSGDNKLQGGGENRWAYDSITNWEF 92
Query: 473 WWPNFPVLVYFKETQTKPDGQVHFFPVIFNGKQLYDVMVERAGRSVNSLP 622 WWP FP LVYF+ETQTK DGQ HFFP+I +G+ LY VM++R +SVN P Sbjct: 93 WWPGFPCLVYFRETQTKSDGQPHFFPIIMDGELLYKVMLDRFPKSVNEKP 142
>tr|A4S4G1|A4S4G1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_26400 PE=4 SV=1 Length = 267
Score = 112 bits (280), Expect = 2e-23 Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 12/110 (10%) Frame = +2
Query: 329 FQTTRVRFVFDDEALEV-----------KVGEELTESGENVFVGG-KNRWKYSTFVNWEM 472 FQ +RVRF F LEV + ++ SG+N GG +NRW Y T NWE Sbjct: 114 FQASRVRFRFTRTDLEVVFIEPGADDSAALATDVASSGDNKLQGGGENRWAYDTITNWEF 173
Query: 473 WWPNFPVLVYFKETQTKPDGQVHFFPVIFNGKQLYDVMVERAGRSVNSLP 622 WWP FP LVYFKETQTK DGQ HFFP+I +GK LY+VM+ R S N P Sbjct: 174 WWPGFPCLVYFKETQTKSDGQPHFFPIIMDGKMLYEVMLSRLPPSQNEKP 223
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