DK963308 |
Clone id |
TST39A01NGRL0016_D01 |
Library |
TST39 |
Length |
551 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_D01. 5' end sequence. |
Accession |
DK963308 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL112Contig1 |
Sequence |
GCCCCGCTTGTGGGTCGCCCAGACGGTCATGAGTCTGCCCAGTCTGCAAGGTTTCTGGGT TGCAGAGAGCTCCATTTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCACCAC AACAAAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGATATACAGCTGTATTCCCG AGAATCTATGTGCGAGATCCACACAAAGTTTTAGGGGTTACTCGAGATGCATCCGAGGAA GAGATTCAATCAGCTCGCAACTTTCTTGCTGAACAATATGCACATCATGAACGAAGTAGG GAAGCTGTTGAGGCAGCTCATGACAAAATCATCATGGAAAGCTTCCGAGCAAGGAAAAAA TCAAAAATCAATCTTAAGAGCAACCTTAAAAAGAAAGTTGAAGAATCACCTCCGTGGGTG AAAAGAATTCTGAATATTTTTGAAGTTCCACCTTCTCAAATTATACTACAGAGGGCGGCC TTTTTTGGACTTATGGGAGTGTGGAGTGTGATGAATCCAGCCGAGGGGGGCCCCGCATTT CAGGTTATGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84BU3 |
Definition |
sp|Q84BU3|DNAJ_LACAC Chaperone protein dnaJ OS=Lactobacillus acidophilus |
Align length |
55 |
Score (bit) |
37.4 |
E-value |
0.049 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX64 |
Definition |
tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
140 |
Score (bit) |
157.0 |
E-value |
4.0e-37 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963308|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_D01, 5' (551 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 157 4e-37 tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 154 4e-36 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 153 7e-36 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 153 7e-36 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 142 1e-32 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 138 2e-31 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 137 4e-31 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 137 4e-31 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 135 2e-30 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 134 4e-30 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 129 8e-29 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 110 4e-23 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 110 5e-23 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 110 5e-23 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 107 4e-22 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 106 9e-22 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 102 1e-20 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 85 3e-15 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 84 6e-15 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 72 3e-11 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 67 6e-10 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 63 1e-08 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 62 2e-08 tr|Q60D81|Q60D81_BRAOL Putative Expressed protein OS=Brassica ol... 61 4e-08 tr|Q6H5B0|Q6H5B0_ORYSJ Os09g0380200 protein OS=Oryza sativa subs... 60 6e-08 tr|A0ZMC6|A0ZMC6_NODSP Putative uncharacterized protein OS=Nodul... 60 8e-08 tr|B2J7N5|B2J7N5_NOSP7 Putative uncharacterized protein OS=Nosto... 59 2e-07 tr|Q0J5P0|Q0J5P0_ORYSJ Os08g0416900 protein (Fragment) OS=Oryza ... 57 6e-07 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 57 8e-07
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 157 bits (397), Expect = 4e-37 Identities = 79/140 (56%), Positives = 100/140 (71%), Gaps = 2/140 (1%) Frame = +1
Query: 133 CALGGS--SDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREA 306 CA+ S G+ VFPR+ V DP+K LGV++ ASEEEIQ ARNFL EQYA HERS E+ Sbjct: 66 CAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEARNFLIEQYAGHERSVES 125
Query: 307 VEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 486 +EAA +KIIM+SFR R V+ESPPWV+ ++N EVPPS++I++RA F Sbjct: 126 IEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINFLEVPPSEVIIRRACLF 185
Query: 487 GLMGVWSVMNPAEGGPAFQV 546 ++GVWSVMN +EGGPAFQV Sbjct: 186 AVIGVWSVMNSSEGGPAFQV 205
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 154 bits (388), Expect = 4e-36 Identities = 78/137 (56%), Positives = 95/137 (69%) Frame = +1
Query: 136 ALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEA 315 A G S VFPR+ V+DP K LGV++DASEEE++ ARN+L EQY HE+SREA+E+ Sbjct: 4 AFGSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIES 63
Query: 316 AHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLM 495 A+D IIM+SFR R VEESPPWV+ I+N+ EVP I+ QRAA F L+ Sbjct: 64 AYDTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLL 123
Query: 496 GVWSVMNPAEGGPAFQV 546 GVWSV NPA GGPAFQV Sbjct: 124 GVWSVFNPANGGPAFQV 140
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 153 bits (386), Expect = 7e-36 Identities = 80/134 (59%), Positives = 93/134 (69%) Frame = +1
Query: 145 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHD 324 G ++ VFPR VRDP K+LGV+ DASEEEI+ A+N+L EQY HE SREA+EAA++ Sbjct: 55 GGAENLKPPVFPRRNVRDPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYE 114
Query: 325 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVW 504 KIIM SFR R VEESPPWV+ ILN+ EVP I QRAA F L+GVW Sbjct: 115 KIIMHSFRVRKASKINLKTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVW 174
Query: 505 SVMNPAEGGPAFQV 546 SV NPAEGGPAFQV Sbjct: 175 SVFNPAEGGPAFQV 188
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 153 bits (386), Expect = 7e-36 Identities = 78/125 (62%), Positives = 91/125 (72%) Frame = +1
Query: 172 VFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRA 351 VFPR VRDP K+LG++ DASEEEI+ A+N+L EQY HE SREA+EAA++KIIM S+R Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 352 RXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGG 531 R VEESPPWV+ ILN+ EVP II QRAA F L+GVWSV NPAEGG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 532 PAFQV 546 PAFQV Sbjct: 125 PAFQV 129
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 142 bits (358), Expect = 1e-32 Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 4/158 (2%) Frame = +1
Query: 85 PGQKGSRHIHHHNKIV----CALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQS 252 P ++ S+ + + ++ CA+ G FPRI V DP+K LG+ DASEEEI S Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 253 ARNFLAEQYAHHERSREAVEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRIL 432 +RNFL +QYA HERS E++EAA +KI+M SF R VEESPPWVK +L Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 433 NIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGPAFQV 546 N E+P +++I +R F MG WS++N AEGGPAFQV Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAFQV 161
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 138 bits (348), Expect = 2e-31 Identities = 69/124 (55%), Positives = 86/124 (69%) Frame = +1
Query: 175 FPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRAR 354 F R+ V DP+K LG++RDASEEE+ S+RNFL QYA+HERS E++EAA +KI+M+SF R Sbjct: 54 FSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKSFINR 113
Query: 355 XXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGP 534 VEESPPWV+ +L+ E+PP IIL+R FG M WSVMN AE GP Sbjct: 114 KKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSAEAGP 173
Query: 535 AFQV 546 AFQV Sbjct: 174 AFQV 177
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 137 bits (345), Expect = 4e-31 Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 4/139 (2%) Frame = +1
Query: 142 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 309 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 310 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 489 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 490 LMGVWSVMNPAEGGPAFQV 546 + WS+ AE GPAFQ+ Sbjct: 177 FIAGWSIATSAENGPAFQL 195
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 137 bits (345), Expect = 4e-31 Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 4/139 (2%) Frame = +1
Query: 142 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 309 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 310 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 489 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 490 LMGVWSVMNPAEGGPAFQV 546 + WS+ AE GPAFQ+ Sbjct: 177 FIAGWSIATSAENGPAFQL 195
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 135 bits (339), Expect = 2e-30 Identities = 67/128 (52%), Positives = 84/128 (65%) Frame = +1
Query: 163 YTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMES 342 + VFPR +RDP+K+LGV RDASEEEI+ ARNFL +QYA HE S EA+E A++KIIM+S Sbjct: 69 HVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKIIMKS 128
Query: 343 FRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPA 522 ++ R VEESP WVK +L FEVP II +R FF + WS+ A Sbjct: 129 YQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIATSA 188
Query: 523 EGGPAFQV 546 E GPAFQ+ Sbjct: 189 ENGPAFQL 196
>tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor) (At5g23040/MYJ24_3) OS=Arabidopsis thaliana GN=AtCDF1 PE=2 SV=1 Length = 258
Score = 134 bits (336), Expect = 4e-30 Identities = 71/148 (47%), Positives = 89/148 (60%) Frame = +1
Query: 103 RHIHHHNKIVCALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYA 282 R++ K V SS G FPR V DP+K LGV+ ASEEEI ++RNFL +QYA Sbjct: 37 RNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYA 96
Query: 283 HHERSREAVEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQI 462 HERS E++E A +K++M SF R VEESPPW+K +L+ E+PP Sbjct: 97 GHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDT 156
Query: 463 ILQRAAFFGLMGVWSVMNPAEGGPAFQV 546 I +R F MG WS+MN AEGGPAFQV Sbjct: 157 IFRRLFLFAFMGGWSIMNSAEGGPAFQV 184
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