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NBDC - LSDB Archive
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DK963311
Clone id TST39A01NGRL0016_D05
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_D05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTTCAGTTTATTAACAGCGAAGTGCCATGGCTCCCCCCGTAGCAACACCCGACATGGAG
GAAGGCATGGACTCTGTAGCTGAGGCCAAACTTCCAGAACTCAAGCTAGATGCTAAACAA
GTGCGCGGGTTTATTAGCTTCTATGGGAGGCTCTCAGAGGATGAGCAGGTGGTCCGATTT
TTTGATAGAAAGGACTACTATACCGCTCACGGAGATAATGCCGTTTTTATCGCAAAAACT
TACTACCGAACTTTGACAGCCTTACGACAGCTTGGCAATGACTCAGATGCTCTTTCCAGT
GTATCAATAAGCAAGAGCATGTTTGAAACCATACTAAGGGATTTATTACTCACGAGGACA
GATCACACAGTAGAATTGTATGAAGGAAGTGGATCTAACTGGAGTTTGATCAAGACAGGG
ACACCTGGGCGCATTGGCAGTTTTGAAGATGTTTTGTTTGCCACTAGTGACATGCAGGAC
ACACCTGTTGTCATGGCAGTGCAAGCCAGCATTCATGAAAATGAAAGACTTGTGGGCATG
GCATTTGTGAACCTGACTAAGAGAAGTATGGGCTTGACAGAGTTTTTGGATGATGATCAT
TAC
■■Homology search results ■■ -
sp_hit_id O24617
Definition sp|O24617|MSH2_ARATH DNA mismatch repair protein Msh2 OS=Arabidopsis thaliana
Align length 172
Score (bit) 239.0
E-value 1.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963311|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_D05, 5'
         (603 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24617|MSH2_ARATH DNA mismatch repair protein Msh2 OS=Arabido...   239   1e-62
sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea may...   212   1e-54
sp|O13396|MSH2_NEUCR DNA mismatch repair protein msh-2 OS=Neuros...   110   4e-24
sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus mus...   101   3e-21
sp|Q5XXB5|MSH2_CERAE DNA mismatch repair protein Msh2 OS=Cercopi...    99   2e-20
sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos tau...    97   6e-20
sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sa...    96   1e-19
sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus no...    94   4e-19
sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1 ...    86   1e-16
sp|O74773|MSH2_SCHPO DNA mismatch repair protein msh2 OS=Schizos...    77   5e-14
sp|Q553L4|MSH2_DICDI DNA mismatch repair protein Msh2 OS=Dictyos...    75   3e-13
sp|P25847|MSH2_YEAST DNA mismatch repair protein MSH2 OS=Sacchar...    69   2e-11
sp|Q7XJS0|ASHR1_ARATH Histone-lysine N-methyltransferase ASHR1 O...    33   1.1  

>sp|O24617|MSH2_ARATH DNA mismatch repair protein Msh2
           OS=Arabidopsis thaliana GN=MSH2 PE=2 SV=1
          Length = 937

 Score =  239 bits (609), Expect = 1e-62
 Identities = 115/172 (66%), Positives = 139/172 (80%)
 Frame = +1

Query: 88  KLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALR 267
           KLPELKLDAKQ +GF+SFY  L  D + VRFFDRKDYYTAHG+N+VFIAKTYY T TALR
Sbjct: 10  KLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTTTALR 69

Query: 268 QLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKTGTPGRIGSFE 447
           QLG+ S+ALSSVSIS++MFETI          HTVELYEGSGSNW L+KTG+PG IGSFE
Sbjct: 70  QLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTGSPGNIGSFE 129

Query: 448 DVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           DVLFA ++MQDTPVV+++  S H+   ++GMA+V+LT+R +GL EFLDD  +
Sbjct: 130 DVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRF 181


>sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays
           GN=MUS1 PE=3 SV=1
          Length = 942

 Score =  212 bits (540), Expect = 1e-54
 Identities = 101/182 (55%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
 Frame = +1

Query: 61  EGMDSVAEA-KLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAK 237
           EG D   E  KLPE KLDA+Q +GFISF+ +L +D + VR FDR+DYYTAHG+NA FIA+
Sbjct: 2   EGDDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIAR 61

Query: 238 TYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKT 417
           TYY T++ALRQLG+ SD + S S+SK+MFETI           T+ELYEGSGSNW L K+
Sbjct: 62  TYYHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKS 121

Query: 418 GTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDD 597
           GTPG IGSFED+LFA +DM+D+PV++A+  +  E++  VG++F+++T R +GL EF +D 
Sbjct: 122 GTPGNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDS 181

Query: 598 HY 603
            +
Sbjct: 182 RF 183


>sp|O13396|MSH2_NEUCR DNA mismatch repair protein msh-2
           OS=Neurospora crassa GN=msh-2 PE=3 SV=1
          Length = 937

 Score =  110 bits (276), Expect = 4e-24
 Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
 Frame = +1

Query: 94  PELKLDAKQVRGFISFYGRLSE-DEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQ 270
           PELK+D +   GFI FY  L +  E+ +R FDR D+YTAHGD+A FIA+T Y+T + +RQ
Sbjct: 5   PELKVDDEH--GFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62

Query: 271 LG-NDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSG-SNWSLIKTGTPGRIGSF 444
           LG +D   L SV+++ ++F                     SG  NW ++K  +PG +   
Sbjct: 63  LGRSDHTGLPSVTMTVTVFRQFLREALFKLGKRIEIWASPSGRMNWKVVKQASPGNLQDV 122

Query: 445 EDVLFATSDMQDTPVVMAVQASIHENE-RLVGMAFVNLTKRSMGLTEFLDDDHY 603
           ED L      +  PV++AV+ S   +E R VG+ F + + R +G++EFLD+D Y
Sbjct: 123 EDEL--GGQFEGAPVILAVKISAKASEARTVGVCFADASVRELGVSEFLDNDLY 174


>sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus
           musculus GN=Msh2 PE=2 SV=1
          Length = 935

 Score =  101 bits (251), Expect = 3e-21
 Identities = 57/177 (32%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
 Frame = +1

Query: 100 LKLDAKQVRGFISFY-GRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLG 276
           L+L+     GF+ F+ G   +    VR FDR D+YTAHG++A+  A+  ++T   ++ +G
Sbjct: 9   LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 N-DSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSN-------WSLIKTGTPGR 432
              S  L SV +SK  FE+           + VE+Y+    N       W L    +PG 
Sbjct: 69  PAGSKTLQSVVLSKMNFESFVKDLLLVRQ-YRVEVYKNKAGNKASKENEWYLAFKASPGN 127

Query: 433 IGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           +  FED+LF  +DM  +  VM ++ ++ + +R VG+ +V+ T+R +GL EF ++D +
Sbjct: 128 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQF 184


>sp|Q5XXB5|MSH2_CERAE DNA mismatch repair protein Msh2
           OS=Cercopithecus aethiops GN=MSH2 PE=2 SV=1
          Length = 933

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
 Frame = +1

Query: 100 LKLDAKQVRGFISFYGRLSEDEQV-VRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLG 276
           L+L++    GF+ F+  + E     VR FDR D+YTAHG++A+  A+  ++T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 N-DSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSN-------WSLIKTGTPGR 432
              +  L SV +SK  FE+           + VE+Y+    N       W L    +PG 
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVRQ-YRVEVYKNRAGNKASKENDWYLAYKASPGN 127

Query: 433 IGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           +  FED+LF  +DM  +  V+ V+ S  + +R VG+ +V+ T+R +GL EF D+D +
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQF 184


>sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos taurus
           GN=MSH2 PE=2 SV=1
          Length = 934

 Score = 97.1 bits (240), Expect = 6e-20
 Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
 Frame = +1

Query: 100 LKLDAKQVRGFISFY-GRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLG 276
           L+LD+    GF+ F+ G   +    VR FDR D+YTAH ++A+  A+  ++T   ++ +G
Sbjct: 9   LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68

Query: 277 N-DSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSN-------WSLIKTGTPGR 432
              +  L SV +SK  FE+           + VE+Y+    N       W L    +PG 
Sbjct: 69  PAGAKTLESVVLSKMNFESFVKDLLLVRQ-YRVEVYKNRAGNKASKENDWYLAFKASPGN 127

Query: 433 IGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           +  FED+LF  +DM  +  V+ V+ S  + +R VG+ +V+ T+R +GL EF D+D +
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQF 184


>sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo
           sapiens GN=MSH2 PE=1 SV=1
          Length = 934

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
 Frame = +1

Query: 100 LKLDAKQVRGFISFY-GRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLG 276
           L+L++    GF+ F+ G   +    VR FDR D+YTAHG++A+  A+  ++T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 N-DSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSN-------WSLIKTGTPGR 432
              +  L SV +SK  FE+           + VE+Y+    N       W L    +PG 
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVRQ-YRVEVYKNRAGNKASKENDWYLAYKASPGN 127

Query: 433 IGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           +  FED+LF  +DM  +  V+ V+ S  + +R VG+ +V+  +R +GL EF D+D +
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQF 184


>sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus
           norvegicus GN=Msh2 PE=2 SV=1
          Length = 933

 Score = 94.4 bits (233), Expect = 4e-19
 Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
 Frame = +1

Query: 100 LKLDAKQVRGFISFY-GRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLG 276
           L+L+     GF+ F+ G   +    V  FDR D+YTAHG++A+  A+  ++T   ++ +G
Sbjct: 9   LQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 N-DSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSN-------WSLIKTGTPGR 432
              +  L +V +SK  FE+           + VE+Y+    N       W L    +PG 
Sbjct: 69  PAGAKTLQTVVLSKMNFESFVKDLLLVRH-YRVEVYKNKAGNKASKENDWYLAYKASPGN 127

Query: 433 IGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           +  FED+LF  +DM  +  +M ++ S  + +R VG+  V+ T+R +GL EF D+D +
Sbjct: 128 LSQFEDILFGNNDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPDNDQF 184


>sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1
           OS=Drosophila melanogaster GN=spel1 PE=1 SV=4
          Length = 917

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
 Frame = +1

Query: 94  PELKLDAKQVRGFISFYGRLSEDEQV-VRFFDRKDYYTAHG-DNAVFIAKTYYRTLTALR 267
           P L +D    R FI F+ +L E     VRFFD  D YT HG D+   +AK  Y++   + 
Sbjct: 12  PTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71

Query: 268 QLGNDS--DALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKTGTPGRIGS 441
            L  D   + L  VS+SK  FE +          + VE+Y  + S+W +   G+PG +  
Sbjct: 72  ALLPDDKKETLQFVSMSKGNFE-LAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQ 130

Query: 442 FEDVLFATSDMQDTPVVMAVQASIH-ENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           FED+LF+  ++     ++++   +    +R VG+A V        L EFLDDD +
Sbjct: 131 FEDILFSNKEVLVGNSIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFF 185


>sp|O74773|MSH2_SCHPO DNA mismatch repair protein msh2
           OS=Schizosaccharomyces pombe GN=msh2 PE=2 SV=2
          Length = 982

 Score = 77.4 bits (189), Expect = 5e-14
 Identities = 46/166 (27%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
 Frame = +1

Query: 136 SFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQLGNDSDALSSVSISK 315
           +FY ++ +D   VR FDR ++Y A G++A F+A+  Y T + L+   ++    S  ++S 
Sbjct: 20  NFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKH--HNVSNTSYCNLSP 77

Query: 316 SMFETIXXXXXXXXXXHTVELY--EGSGSNWSLIKTGTPGRIGSFEDVLF--------AT 465
           S+F               VE++    + + + L+K  +PG +   ED+L         A 
Sbjct: 78  SLFIKFAEDVLSNLAKR-VEIWGANSAKTGFELLKQASPGNMQMLEDLLVSENYQESTAI 136

Query: 466 SDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           SD   + V++AV   + +++R++G+AF++   + +G++EF+D D Y
Sbjct: 137 SDSSVSSVLLAVTTRVKQDQRIIGVAFIDPILKKLGVSEFVDSDAY 182
tr_hit_id A9TKK7
Definition tr|A9TKK7|A9TKK7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 181
Score (bit) 238.0
E-value 2.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963311|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_D05, 5'
         (603 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TKK7|A9TKK7_PHYPA Predicted protein OS=Physcomitrella paten...   238   2e-61
tr|Q45RT1|Q45RT1_PHYPA DNA mismatch repair protein MSH2 OS=Physc...   237   3e-61
tr|Q6DQL7|Q6DQL7_PETHY DNA mismatch repair protein OS=Petunia hy...   222   2e-56
tr|Q0DJI9|Q0DJI9_ORYSJ Os05g0274200 protein OS=Oryza sativa subs...   218   2e-55
tr|B8AW22|B8AW22_ORYSI Putative uncharacterized protein OS=Oryza...   218   2e-55
tr|A3B234|A3B234_ORYSJ Putative uncharacterized protein OS=Oryza...   218   2e-55
tr|A7PGN8|A7PGN8_VITVI Chromosome chr17 scaffold_16, whole genom...   182   1e-44
tr|A4RQJ8|A4RQJ8_OSTLU Predicted protein OS=Ostreococcus lucimar...   127   7e-28
tr|Q00ZW2|Q00ZW2_OSTTA Mismatch repair ATPase MSH4 (MutS family)...   122   2e-26
tr|Q2GQZ0|Q2GQZ0_CHAGB DNA mismatch repair protein msh-2 OS=Chae...   112   2e-23
tr|B2AKZ5|B2AKZ5_PODAN Predicted CDS Pa_5_9410 (Fragment) OS=Pod...   109   1e-22
tr|Q7Q0L2|Q7Q0L2_ANOGA AGAP010282-PA (Fragment) OS=Anopheles gam...   106   9e-22
tr|A1CK85|A1CK85_ASPCL DNA mismatch repair protein Msh2, putativ...   105   2e-21
tr|Q4WXK7|Q4WXK7_ASPFU DNA mismatch repair protein Msh2, putativ...   105   3e-21
tr|Q1E676|Q1E676_COCIM Putative uncharacterized protein OS=Cocci...   105   3e-21
tr|B0XY17|B0XY17_ASPFC DNA mismatch repair protein Msh2, putativ...   105   3e-21
tr|B2WN83|B2WN83_PYRTR DNA mismatch repair protein MSH2 OS=Pyren...   104   5e-21
tr|B3RWE3|B3RWE3_TRIAD Putative uncharacterized protein OS=Trich...   103   6e-21
tr|Q2UQG3|Q2UQG3_ASPOR Mismatch repair ATPase MSH2 OS=Aspergillu...   103   6e-21
tr|B8MZK3|B8MZK3_ASPFL DNA mismatch repair protein Msh2, putativ...   103   6e-21
tr|Q0UFF6|Q0UFF6_PHANO Putative uncharacterized protein OS=Phaeo...   103   8e-21
tr|B6GY32|B6GY32_PENCH Pc12g15640 protein OS=Penicillium chrysog...   103   8e-21
tr|A1D784|A1D784_NEOFI DNA mismatch repair protein Msh2, putativ...   103   8e-21
tr|Q0CP76|Q0CP76_ASPTN DNA mismatch repair protein msh-2 OS=Aspe...   102   2e-20
tr|A6R749|A6R749_AJECN DNA mismatch repair protein msh-2 OS=Ajel...   102   2e-20
tr|A4RDT4|A4RDT4_MAGGR DNA mismatch repair protein msh-2 OS=Magn...   102   2e-20
tr|Q80V79|Q80V79_MOUSE MutS homolog 2 (E. coli) OS=Mus musculus ...   101   4e-20
tr|Q3TZI5|Q3TZI5_MOUSE Putative uncharacterized protein OS=Mus m...   101   4e-20
tr|A2R7H2|A2R7H2_ASPNC Complex: heterodimer of MSH2 and MSH6 OS=...   100   5e-20
tr|B2DD05|B2DD05_MESAU Mismatch repair protein (Fragment) OS=Mes...   100   9e-20

>tr|A9TKK7|A9TKK7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_223185 PE=3 SV=1
          Length = 956

 Score =  238 bits (608), Expect = 2e-61
 Identities = 114/181 (62%), Positives = 145/181 (80%)
 Frame = +1

Query: 61  EGMDSVAEAKLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKT 240
           + M+   E KLPELKLD KQ +GFISF+ RL E+EQ VRFFDRKDY+TAHGDNA FIA T
Sbjct: 4   DSMEKGDEPKLPELKLDVKQAQGFISFFRRLPENEQAVRFFDRKDYFTAHGDNATFIAST 63

Query: 241 YYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKTG 420
           YYRTLT LRQLG+ +D+L  V+I+KSMFETI           TVELYEG+GS W L+++G
Sbjct: 64  YYRTLTVLRQLGSGADSLPGVTINKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSG 123

Query: 421 TPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDH 600
           +PG++GSFE+VLFA+++MQ+TPVVMAV  +  ++ER VG+AFV++TKR +G+TEFLDDD 
Sbjct: 124 SPGKLGSFEEVLFASNEMQETPVVMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDL 183

Query: 601 Y 603
           Y
Sbjct: 184 Y 184


>tr|Q45RT1|Q45RT1_PHYPA DNA mismatch repair protein MSH2
           OS=Physcomitrella patens PE=3 SV=1
          Length = 951

 Score =  237 bits (605), Expect = 3e-61
 Identities = 113/181 (62%), Positives = 145/181 (80%)
 Frame = +1

Query: 61  EGMDSVAEAKLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKT 240
           + M+   E KLPELKLD KQ +GFISF+ RL E+EQ VRFFDR+DY+TAHGDNA FIA T
Sbjct: 4   DSMEKGDEPKLPELKLDVKQAQGFISFFRRLPENEQAVRFFDRRDYFTAHGDNATFIAST 63

Query: 241 YYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKTG 420
           YYRTLT LRQLG+ +D+L  V+I+KSMFETI           TVELYEG+GS W L+++G
Sbjct: 64  YYRTLTVLRQLGSGADSLPGVTINKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSG 123

Query: 421 TPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDH 600
           +PG++GSFE+VLFA+++MQ+TPVVMAV  +  ++ER VG+AFV++TKR +G+TEFLDDD 
Sbjct: 124 SPGKLGSFEEVLFASNEMQETPVVMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDL 183

Query: 601 Y 603
           Y
Sbjct: 184 Y 184


>tr|Q6DQL7|Q6DQL7_PETHY DNA mismatch repair protein OS=Petunia
           hybrida GN=MSH2 PE=2 SV=1
          Length = 942

 Score =  222 bits (565), Expect = 2e-56
 Identities = 103/174 (59%), Positives = 137/174 (78%)
 Frame = +1

Query: 82  EAKLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTA 261
           +AKLPELKLDA+Q +GF+SF+  L +D + VR FDR+DYYTAHGD+A FIAKTYY T +A
Sbjct: 8   QAKLPELKLDARQAQGFLSFFKTLPKDTRAVRLFDRRDYYTAHGDDASFIAKTYYHTTSA 67

Query: 262 LRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKTGTPGRIGS 441
           LRQLGN +DALSSV++S++MFETI           T+ELYEGSGSNW L+K GTPG +GS
Sbjct: 68  LRQLGNGADALSSVTVSRNMFETIARDILLERMDRTLELYEGSGSNWRLVKNGTPGVLGS 127

Query: 442 FEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           FED+LFA ++MQD+PV++A+  +  +N   +G+ +V++TKR +GL EFLDD H+
Sbjct: 128 FEDILFANNEMQDSPVIVALAPNSSQNGCTIGLGYVDITKRILGLAEFLDDSHF 181


>tr|Q0DJI9|Q0DJI9_ORYSJ Os05g0274200 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0274200 PE=3 SV=1
          Length = 942

 Score =  218 bits (556), Expect = 2e-55
 Identities = 106/182 (58%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
 Frame = +1

Query: 61  EGMDSVAEA-KLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAK 237
           EG D + E  KLPELKLDA+Q +GFISF+ +L +D + +R FDR+DYYTAHG+NA FIAK
Sbjct: 2   EGDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAK 61

Query: 238 TYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKT 417
            YY T++ALRQLG++SD LSSVS+SK+MFETI           T+ELYEGSGS+W L K+
Sbjct: 62  IYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKS 121

Query: 418 GTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDD 597
           GTPG IGSFED+LFA +DMQD+PV +A+     E +  VG++FV+LT R +GL+EF +D 
Sbjct: 122 GTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDS 181

Query: 598 HY 603
            +
Sbjct: 182 RF 183


>tr|B8AW22|B8AW22_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19262 PE=4 SV=1
          Length = 942

 Score =  218 bits (556), Expect = 2e-55
 Identities = 106/182 (58%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
 Frame = +1

Query: 61  EGMDSVAEA-KLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAK 237
           EG D + E  KLPELKLDA+Q +GFISF+ +L +D + +R FDR+DYYTAHG+NA FIAK
Sbjct: 2   EGDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAK 61

Query: 238 TYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKT 417
            YY T++ALRQLG++SD LSSVS+SK+MFETI           T+ELYEGSGS+W L K+
Sbjct: 62  IYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKS 121

Query: 418 GTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDD 597
           GTPG IGSFED+LFA +DMQD+PV +A+     E +  VG++FV+LT R +GL+EF +D 
Sbjct: 122 GTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDS 181

Query: 598 HY 603
            +
Sbjct: 182 RF 183


>tr|A3B234|A3B234_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017106 PE=3 SV=1
          Length = 905

 Score =  218 bits (556), Expect = 2e-55
 Identities = 106/182 (58%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
 Frame = +1

Query: 61  EGMDSVAEA-KLPELKLDAKQVRGFISFYGRLSEDEQVVRFFDRKDYYTAHGDNAVFIAK 237
           EG D + E  KLPELKLDA+Q +GFISF+ +L +D + +R FDR+DYYTAHG+NA FIAK
Sbjct: 2   EGDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAK 61

Query: 238 TYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGSNWSLIKT 417
            YY T++ALRQLG++SD LSSVS+SK+MFETI           T+ELYEGSGS+W L K+
Sbjct: 62  IYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKS 121

Query: 418 GTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDD 597
           GTPG IGSFED+LFA +DMQD+PV +A+     E +  VG++FV+LT R +GL+EF +D 
Sbjct: 122 GTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDS 181

Query: 598 HY 603
            +
Sbjct: 182 RF 183


>tr|A7PGN8|A7PGN8_VITVI Chromosome chr17 scaffold_16, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017625001
           PE=3 SV=1
          Length = 802

 Score =  182 bits (462), Expect = 1e-44
 Identities = 86/137 (62%), Positives = 107/137 (78%)
 Frame = +1

Query: 193 DYYTAHGDNAVFIAKTYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTV 372
           DYYTAHG+NA FIAKTYY T TALRQLG+ SD +SSVS+SK+MFETI          HT+
Sbjct: 9   DYYTAHGENATFIAKTYYHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTL 68

Query: 373 ELYEGSGSNWSLIKTGTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVN 552
           ELYEGSGSNW L+K+GTPG +GSFEDVLFA ++MQD+PV++A+  +  EN   VG+ FV+
Sbjct: 69  ELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVD 128

Query: 553 LTKRSMGLTEFLDDDHY 603
           LT+R +GL EFLDD  +
Sbjct: 129 LTRRVLGLAEFLDDSQF 145


>tr|A4RQJ8|A4RQJ8_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_28688 PE=3 SV=1
          Length = 936

 Score =  127 bits (318), Expect = 7e-28
 Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
 Frame = +1

Query: 55  MEEGMDSVAEAKLPELKLDAKQVRGFISFY-GRLSEDEQVVRFFDRKDYYTAHGDNAVFI 231
           M    D+ A      L LD      F+ FY G  SE  +VVRFFDRKD  +AHGD+A++I
Sbjct: 1   MSNEPDARAATATGALALDDAASAKFVRFYRGLPSETARVVRFFDRKDCISAHGDDAMYI 60

Query: 232 AKTYYRTLTALRQLGNDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGS--GSNWS 405
           A+ +Y+T + ++ +G+  DAL  V++++SMFE+             VE YE S     W+
Sbjct: 61  ARAFYKTTSVIKTMGSGDDALPGVALNRSMFESALRELLLDGDGARVEFYEESKPSGTWT 120

Query: 406 LIKTGTPGRIGSFEDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEF 585
            +K+ +PG++ +FED LF +++M D  VV AV+ +       VG+A+ N T R +G   F
Sbjct: 121 CVKSASPGKLQAFEDELFRSNEMSDASVVCAVRVA----NGNVGVAYANTTTRELGACAF 176

Query: 586 LDDDHY 603
           +DD+ Y
Sbjct: 177 VDDEQY 182


>tr|Q00ZW2|Q00ZW2_OSTTA Mismatch repair ATPase MSH4 (MutS family)
           (ISS) OS=Ostreococcus tauri GN=Ot10g02130 PE=3 SV=1
          Length = 913

 Score =  122 bits (306), Expect = 2e-26
 Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
 Frame = +1

Query: 109 DAKQVRGFISFYGRLSED-----EQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQL 273
           DA     F   Y RL  D     E+VVRFFDR+D+Y+ HG +A ++A+T+Y+T + ++  
Sbjct: 3   DADAETKFARVYARLIADDGRAGERVVRFFDRRDFYSVHGADAEYVARTFYKTTSVIKHT 62

Query: 274 GNDSDALSSVSISKSMFET-IXXXXXXXXXXHTVELYEGS--GSNWSLIKTGTPGRIGSF 444
           G   DAL+ V+++++MFET +            VELYE S     W+L KT +PGR  +F
Sbjct: 63  GRGEDALAGVTLNRAMFETALRELLIEGAEGARVELYEESKPSGTWTLSKTASPGRTQAF 122

Query: 445 EDVLFATSDMQDTPVVMAVQASIHENERLVGMAFVNLTKRSMGLTEFLDDDHY 603
           E+ LF +++M D  VV AV+A+       VG+A+VN T R +G   F+DD+ +
Sbjct: 123 EEELFRSNEMSDAAVVCAVRATSGGG---VGVAYVNATTRELGACAFVDDEQF 172


>tr|Q2GQZ0|Q2GQZ0_CHAGB DNA mismatch repair protein msh-2
           OS=Chaetomium globosum GN=CHGG_09614 PE=3 SV=1
          Length = 942

 Score =  112 bits (279), Expect = 2e-23
 Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
 Frame = +1

Query: 94  PELKLDAKQVRGFISFYGRL-SEDEQVVRFFDRKDYYTAHGDNAVFIAKTYYRTLTALRQ 270
           PELK+D +   GFI F+  L + D+ V+R FDR D+YTAHG+NA FIA+T Y+T + +RQ
Sbjct: 5   PELKVDDEH--GFIRFFKSLPTVDDDVIRIFDRGDWYTAHGENANFIARTVYKTTSVVRQ 62

Query: 271 LG-NDSDALSSVSISKSMFETIXXXXXXXXXXHTVELYEGSGS--NWSLIKTGTPGRIGS 441
           LG NDS  L SV+++ ++F               +E++       NW + K  +PG +  
Sbjct: 63  LGRNDSTGLQSVTMTMTVFRQFLREALYKLGKR-IEIWASPNGRMNWKIAKQASPGNLQD 121

Query: 442 FEDVLFATSDMQDTPVVMAVQASIHENE-RLVGMAFVNLTKRSMGLTEFLDDDHY 603
            E+ L + ++    PV++AV+ S   +E R VG+ F + + R +G++EFLD+D Y
Sbjct: 122 VEEDLGSLAEA--APVILAVKISAKASEARAVGVCFADASVRELGVSEFLDNDSY 174