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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963324
Clone id TST39A01NGRL0016_D18
Library
Length 622
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_D18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCAGCAGCAACACACACACACACACACACACACACACACACACACACACACACAGACACT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACATACACACACGCGCACGTCTTT
CTGCTTTCTCGTCTCTTGTTCTTGAACAAAGCGGTAGGGGAGGAGAGTATGCAAAGAACG
TCCAGCGCTTACAATCGCCGCAATGACATCTCCAGCAACCTGCTAGCTCCTCTGCAATTG
GGCCGGGCTCACCTTTCCCACAGGTATGTTGTCTCTCTCTGAGGGATGCTTACAATTTTC
CACGGAGAAATGCGAGCGATCCATGGGTTCTTGACTCATATCTTGCCCATTCTACAATCA
CAATCAGTTATTCATAGCCATAGCTGAACTCACATCTTGCCCATTTTGCACTCACACGGC
CATAGCTCAACTCACATCTCGACCATTTTGCACTCAAGTAGATTTATACAGAGCCATAGC
TGAATTATATATGGGGGATGCATGTAGCCATGTTGTTGAATTTAGGGTTATTTGGCTCTT
TTGCAGAGTTGTTTTAGCGCCAGTGACGCGATGCAGAGCACTTAATTACGTTCCACAGCA
GGCGCATGTCGAATTTTACTCT
■■Homology search results ■■ -
sp_hit_id Q9FEW9
Definition sp|Q9FEW9|OPR3_SOLLC 12-oxophytodienoate reductase 3 OS=Solanum lycopersicum
Align length 25
Score (bit) 40.0
E-value 0.01
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963324|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_D18, 5'
         (622 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FEW9|OPR3_SOLLC 12-oxophytodienoate reductase 3 OS=Solanum ...    40   0.010
sp|Q9FUP0|OPR3_ARATH 12-oxophytodienoate reductase 3 OS=Arabidop...    40   0.013
sp|Q6PAJ3|FA59B_MOUSE Protein FAM59B OS=Mus musculus GN=Fam59b P...    32   3.4  
sp|O42922|YBIH_SCHPO Uncharacterized MFS-type transporter C16A3....    31   4.5  
sp|Q9XG54|OPR1_SOLLC 12-oxophytodienoate reductase 1 OS=Solanum ...    31   5.9  

>sp|Q9FEW9|OPR3_SOLLC 12-oxophytodienoate reductase 3 OS=Solanum
           lycopersicum GN=OPR3 PE=1 SV=1
          Length = 396

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFY 619
           RVVLAP+TRCRALN +PQ A  E+Y
Sbjct: 26  RVVLAPMTRCRALNNIPQAALGEYY 50


>sp|Q9FUP0|OPR3_ARATH 12-oxophytodienoate reductase 3 OS=Arabidopsis
           thaliana GN=OPR3 PE=1 SV=2
          Length = 391

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RVVLAP+TRCRALN VP  A  E+Y+
Sbjct: 26  RVVLAPMTRCRALNGVPNAALAEYYA 51


>sp|Q6PAJ3|FA59B_MOUSE Protein FAM59B OS=Mus musculus GN=Fam59b PE=2
           SV=2
          Length = 880

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -1

Query: 259 GKGEPGPIAEELAGCWRCHCGDCKRWTFFAYSPPLPLCSRT 137
           G G P P A  L  C+ C  GDCK     +  PP PL S T
Sbjct: 545 GSGSPSPDAYSLY-CYPCTWGDCKASESSSRPPPGPLPSTT 584


>sp|O42922|YBIH_SCHPO Uncharacterized MFS-type transporter C16A3.17c
           OS=Schizosaccharomyces pombe GN=SPBC16A3.17c PE=2 SV=1
          Length = 599

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
 Frame = +2

Query: 251 TFPTGMLSLSEGCLQFSTEKCERSMGS*LISCPFYNHNQLFIAIAEL-----TSCPFCTH 415
           TFP  M S++   L F      R+MG             + I + E+      +  F  +
Sbjct: 477 TFPPAMTSMATATLMFI-----RTMGG-----------SIGITVGEVIFNERVTQSFDGN 520

Query: 416 TAIAQLTSRPFCTQVDLYRAIAELYMGDACSHVVEFRVIWLFCRVVLA 559
           T  AQL+ +    QV+  R   EL +    ++   FRVIW+FC VV+A
Sbjct: 521 TTYAQLSYK----QVE--RLPQELQIRVKNTYASAFRVIWIFCTVVMA 562


>sp|Q9XG54|OPR1_SOLLC 12-oxophytodienoate reductase 1 OS=Solanum
           lycopersicum GN=OPR1 PE=1 SV=1
          Length = 376

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RVVLAP+TR R+  Y+PQ   +  YS
Sbjct: 30  RVVLAPLTRQRSYGYIPQPHAILHYS 55
tr_hit_id B5AGU9
Definition tr|B5AGU9|B5AGU9_ARTAN 12-oxophytodienoate reductase-like protein OS=Artemisia annua
Align length 25
Score (bit) 41.2
E-value 0.05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963324|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_D18, 5'
         (622 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5AGU9|B5AGU9_ARTAN 12-oxophytodienoate reductase-like protei...    41   0.050
tr|A7PDY3|A7PDY3_VITVI Chromosome chr11 scaffold_13, whole genom...    40   0.11 
tr|A5B154|A5B154_VITVI Putative uncharacterized protein OS=Vitis...    40   0.11 
tr|Q4ZJ73|Q4ZJ73_HEVBR 12-oxophytodienoate reductase OS=Hevea br...    40   0.15 
tr|A5BF80|A5BF80_VITVI Putative uncharacterized protein OS=Vitis...    37   0.73 
tr|A2YAP1|A2YAP1_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.73 
tr|Q49HD9|Q49HD9_MAIZE 12-oxo-phytodienoic acid reductase (Putat...    37   0.95 
tr|A9RBD6|A9RBD6_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.6  
tr|Q6Z965|Q6Z965_ORYSJ Os08g0459600 protein OS=Oryza sativa subs...    36   2.1  
tr|A9TUL6|A9TUL6_PHYPA Predicted protein OS=Physcomitrella paten...    36   2.1  
tr|A2YVX7|A2YVX7_ORYSI Putative uncharacterized protein OS=Oryza...    36   2.1  
tr|A9SM89|A9SM89_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.8  
tr|Q49HE2|Q49HE2_MAIZE 12-oxo-phytodienoic acid reductase (Putat...    35   3.6  
tr|B6U6R3|B6U6R3_MAIZE 12-oxophytodienoate reductase 2 OS=Zea ma...    35   3.6  
tr|Q26BG2|Q26BG2_9BACT NADH:flavin oxidoreductase/ NADH oxidase ...    35   4.7  
tr|Q69TH6|Q69TH6_ORYSJ Putative 12-oxophytodienoic acid reductas...    35   4.7  
tr|Q69TH4|Q69TH4_ORYSJ Os06g0216200 protein OS=Oryza sativa subs...    35   4.7  
tr|Q49HD8|Q49HD8_MAIZE 12-oxo-phytodienoic acid reductase (Putat...    35   4.7  
tr|Q0DDL7|Q0DDL7_ORYSJ Os06g0216000 protein OS=Oryza sativa subs...    35   4.7  
tr|B8B3Z6|B8B3Z6_ORYSI Putative uncharacterized protein OS=Oryza...    35   4.7  
tr|A3B9N4|A3B9N4_ORYSJ Putative uncharacterized protein OS=Oryza...    35   4.7  
tr|Q8ENE8|Q8ENE8_OCEIH Hypothetical conserved protein OS=Oceanob...    34   8.0  
tr|Q2RIP3|Q2RIP3_MOOTA 4Fe-4S ferredoxin, iron-sulfur binding OS...    34   8.0  
tr|Q4QGH6|Q4QGH6_LEIMA NADH:flavin oxidoreductase/NADH oxidase, ...    34   8.0  

>tr|B5AGU9|B5AGU9_ARTAN 12-oxophytodienoate reductase-like protein
           OS=Artemisia annua PE=2 SV=1
          Length = 392

 Score = 41.2 bits (95), Expect = 0.050
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFY 619
           RVVLAP+TRCRA+N +P +A VE+Y
Sbjct: 21  RVVLAPMTRCRAINAIPNEALVEYY 45


>tr|A7PDY3|A7PDY3_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016458001
           PE=4 SV=1
          Length = 389

 Score = 40.0 bits (92), Expect = 0.11
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RV LAP+TRCRA+N +PQ A  E+YS
Sbjct: 26  RVALAPMTRCRAMNGIPQPALAEYYS 51


>tr|A5B154|A5B154_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017917 PE=4 SV=1
          Length = 365

 Score = 40.0 bits (92), Expect = 0.11
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RV LAP+TRCRA+N +PQ A  E+YS
Sbjct: 26  RVALAPMTRCRAMNGIPQPALAEYYS 51


>tr|Q4ZJ73|Q4ZJ73_HEVBR 12-oxophytodienoate reductase OS=Hevea
           brasiliensis GN=opr PE=2 SV=1
          Length = 399

 Score = 39.7 bits (91), Expect = 0.15
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RVVLAP+TRCRALN +P  A V++Y+
Sbjct: 28  RVVLAPMTRCRALNGIPNAALVDYYT 53


>tr|A5BF80|A5BF80_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036518 PE=4 SV=1
          Length = 358

 Score = 37.4 bits (85), Expect = 0.73
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 512 VVEFRVIWLFCRVVLAPVTRCRALNYVPQQAHVEFYS 622
           +  F     FCRVVLAP+TR R+ N VPQ   + +YS
Sbjct: 1   MANFSFTLTFCRVVLAPLTRQRSWNNVPQPHAILYYS 37


>tr|A2YAP1|A2YAP1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22158 PE=4 SV=1
          Length = 780

 Score = 37.4 bits (85), Expect = 0.73
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +2

Query: 536 LFCRVVLAPVTRCRALNYVPQQAHVEFYS 622
           LF RVVLAP+TRCR+  +VPQ     +YS
Sbjct: 11  LFHRVVLAPLTRCRSYGHVPQPHAAVYYS 39


>tr|Q49HD9|Q49HD9_MAIZE 12-oxo-phytodienoic acid reductase (Putative
           uncharacterized protein) OS=Zea mays GN=OPR6 PE=2 SV=1
          Length = 372

 Score = 37.0 bits (84), Expect = 0.95
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFY 619
           RVVLAP+TRCRA   VPQ  H+  Y
Sbjct: 22  RVVLAPLTRCRAFGNVPQPEHMALY 46


>tr|A9RBD6|A9RBD6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_158472 PE=4 SV=1
          Length = 394

 Score = 36.2 bits (82), Expect = 1.6
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RVVLAP+TRCR+ N++PQ     +YS
Sbjct: 43  RVVLAPLTRCRSYNHIPQPHAALYYS 68


>tr|Q6Z965|Q6Z965_ORYSJ Os08g0459600 protein OS=Oryza sativa subsp.
           japonica GN=P0690E03.3 PE=2 SV=1
          Length = 394

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFYS 622
           RVVLAP+TRCRA+  VP  A  E+Y+
Sbjct: 30  RVVLAPMTRCRAIGGVPGPALAEYYA 55


>tr|A9TUL6|A9TUL6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_151028 PE=4 SV=1
          Length = 367

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +2

Query: 545 RVVLAPVTRCRALNYVPQQAHVEFY 619
           RVVLAP+TRCR+   VPQ +H   Y
Sbjct: 17  RVVLAPLTRCRSYGCVPQPSHAALY 41