DK963346
Clone id TST39A01NGRL0016_E17
Library
Length 375
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_E17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTTTTCATGGGGCGTGGCAAATCGTGGAGCTTCTATTCGTGTTGGGCGGGATACTGAGA
AAGAAGGCAAAGGGTACTTTGAGGATAGGAGACCTGCAAGCAACATGGATCCCTATACCG
TAACTTCCATGGTTGCATACACCACTATCTTGTACAATCCTTGAAGGTAAGGTAGAAGAG
TTAAAATGTAGATGTGGCCATACGCCCGCAGGACAGGAGCAACTCAAATATGTCTGTTTC
TCTGTTCAGAGAGCGAGGAAGCTATTTTGGAATCCATGACAGTTGGCTCTTCTGGCCCCT
CATTCAATCATTTACTTGAAAAAGTTGTTCAAAATAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q56WN1
Definition sp|Q56WN1|GLN11_ARATH Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana
Align length 53
Score (bit) 103.0
E-value 4.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963346|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_E17, 5'
(330 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q56WN1|GLN11_ARATH Glutamine synthetase cytosolic isozyme 1-1... 103 4e-22
sp|P52783|GLNA_PINSY Glutamine synthetase cytosolic isozyme OS=P... 102 5e-22
sp|Q8LCE1|GLN12_ARATH Glutamine synthetase cytosolic isozyme 1-2... 102 5e-22
sp|P08282|GLNA1_PEA Glutamine synthetase nodule isozyme OS=Pisum... 102 8e-22
sp|O04867|GLNA1_ALNGL Glutamine synthetase OS=Alnus glutinosa GN... 101 1e-21
sp|P04771|GLNA2_PHAVU Glutamine synthetase PR-2 OS=Phaseolus vul... 100 2e-21
sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme OS=... 100 2e-21
sp|Q43785|GLNA3_MEDSA Glutamine synthetase nodule isozyme OS=Med... 100 3e-21
sp|P51119|GLNA2_VITVI Glutamine synthetase cytosolic isozyme 2 O... 100 4e-21
sp|Q9LVI8|GLN13_ARATH Glutamine synthetase cytosolic isozyme 1-3... 100 4e-21
sp|P23712|GLNA_LACSA Glutamine synthetase OS=Lactuca sativa PE=2... 99 7e-21
sp|O82560|GLNA2_SOYBN Glutamine synthetase cytosolic isozyme 2 O... 99 7e-21
sp|P51118|GLNA1_VITVI Glutamine synthetase cytosolic isozyme 1 O... 99 7e-21
sp|P38559|GLNA1_MAIZE Glutamine synthetase root isozyme 1 OS=Zea... 99 7e-21
sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme OS=Vign... 99 9e-21
sp|Q43066|GLNA4_PEA Glutamine synthetase root isozyme B OS=Pisum... 99 9e-21
sp|P07694|GLNA3_PEA Glutamine synthetase root isozyme A OS=Pisum... 99 9e-21
sp|P04770|GLNA1_PHAVU Glutamine synthetase PR-1 OS=Phaseolus vul... 99 9e-21
sp|P00965|GLNA3_PHAVU Glutamine synthetase N-1 OS=Phaseolus vulg... 98 1e-20
sp|P24099|GLNA1_SOYBN Glutamine synthetase cytosolic isozyme 1 O... 98 1e-20
sp|O22504|GLNA1_DAUCA Glutamine synthetase cytosolic isozyme OS=... 98 1e-20
sp|Q4W8D0|GLN13_ORYSJ Glutamine synthetase cytosolic isozyme 1-3... 98 1e-20
sp|Q9FMD9|GLN14_ARATH Glutamine synthetase cytosolic isozyme 1-4... 98 1e-20
sp|P38563|GLNA5_MAIZE Glutamine synthetase root isozyme 5 OS=Zea... 97 2e-20
sp|P38561|GLNA3_MAIZE Glutamine synthetase root isozyme 3 OS=Zea... 97 2e-20
sp|P04078|GLNA1_MEDSA Glutamine synthetase cytosolic isozyme OS=... 97 2e-20
sp|P52782|GLNA_LUPLU Glutamine synthetase nodule isozyme OS=Lupi... 97 3e-20
sp|P14654|GLN12_ORYSJ Glutamine synthetase cytosolic isozyme 1-2... 97 3e-20
sp|P14656|GLN11_ORYSJ Glutamine synthetase cytosolic isozyme 1-1... 97 3e-20
sp|Q06378|GLNA3_HORVU Glutamine synthetase OS=Hordeum vulgare PE... 96 4e-20

>sp|Q56WN1|GLN11_ARATH Glutamine synthetase cytosolic isozyme 1-1
OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2
Length = 356

Score = 103 bits (256), Expect = 4e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL+NP
Sbjct: 304 FLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAETTILWNP 356


>sp|P52783|GLNA_PINSY Glutamine synthetase cytosolic isozyme
OS=Pinus sylvestris PE=2 SV=1
Length = 357

Score = 102 bits (255), Expect = 5e-22
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL+ P
Sbjct: 305 FSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAETTILWKP 357


>sp|Q8LCE1|GLN12_ARATH Glutamine synthetase cytosolic isozyme 1-2
OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2
Length = 356

Score = 102 bits (255), Expect = 5e-22
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TT+L+NP
Sbjct: 304 FLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWNP 356


>sp|P08282|GLNA1_PEA Glutamine synthetase nodule isozyme OS=Pisum
sativum GN=GS1 PE=2 SV=2
Length = 355

Score = 102 bits (253), Expect = 8e-22
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL P
Sbjct: 303 FSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILLKP 355


>sp|O04867|GLNA1_ALNGL Glutamine synthetase OS=Alnus glutinosa
GN=GLN1 PE=2 SV=1
Length = 356

Score = 101 bits (251), Expect = 1e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TT+L+ P
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP 356


>sp|P04771|GLNA2_PHAVU Glutamine synthetase PR-2 OS=Phaseolus
vulgaris PE=2 SV=1
Length = 356

Score = 100 bits (250), Expect = 2e-21
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRG+S+RVGRDTEK+GKGYFEDRRPASNMDPY VTSM+A TTIL+ P
Sbjct: 304 FSWGVANRGSSVRVGRDTEKQGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme
OS=Lotus japonicus GN=GLN1 PE=2 SV=2
Length = 356

Score = 100 bits (250), Expect = 2e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL+ P
Sbjct: 304 FLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 356


>sp|Q43785|GLNA3_MEDSA Glutamine synthetase nodule isozyme
OS=Medicago sativa GN=GS1 PE=2 SV=1
Length = 356

Score = 100 bits (248), Expect = 3e-21
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEK+GKGYFEDRRP+SNMDPY VTSM+A TT+L+ P
Sbjct: 304 FSWGVANRGASVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTLLWKP 356


>sp|P51119|GLNA2_VITVI Glutamine synthetase cytosolic isozyme 2
OS=Vitis vinifera GN=GS1-2 PE=2 SV=1
Length = 356

Score = 99.8 bits (247), Expect = 4e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A +TIL+ P
Sbjct: 304 FLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAESTILWKP 356


>sp|Q9LVI8|GLN13_ARATH Glutamine synthetase cytosolic isozyme 1-3
OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1
Length = 354

Score = 99.8 bits (247), Expect = 4e-21
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTIL 152
FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL
Sbjct: 304 FSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 353


tr_hit_id A9TWD3
Definition tr|A9TWD3|A9TWD3_PHYPA Glutamine synthetase OS=Physcomitrella patens subsp. patens
Align length 53
Score (bit) 106.0
E-value 5.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963346|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_E17, 5'
(330 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TWD3|A9TWD3_PHYPA Glutamine synthetase OS=Physcomitrella pa... 106 5e-22
tr|A9TWC2|A9TWC2_PHYPA Glutamine synthetase OS=Physcomitrella pa... 105 8e-22
tr|Q42625|Q42625_BRANA Glutamine synthetase OS=Brassica napus GN... 105 1e-21
tr|Q3L0U0|Q3L0U0_BRARP Glutamine synthetase OS=Brassica rapa sub... 105 1e-21
tr|O04852|O04852_BRANA Glutamine synthetase OS=Brassica napus GN... 105 1e-21
tr|B5A7Q8|B5A7Q8_BRAOT Cytosolic glutamine synthetase OS=Brassic... 105 1e-21
tr|B5A7Q7|B5A7Q7_BRAOB Cytosolic glutamine synthetase OS=Brassic... 105 1e-21
tr|Q8RW39|Q8RW39_SOLLC Putative glutamine synthase (Fragment) OS... 104 2e-21
tr|O24334|O24334_RAPSA Glutamine synthetase OS=Raphanus sativus ... 104 2e-21
tr|A9RP01|A9RP01_PHYPA Glutamine synthetase OS=Physcomitrella pa... 104 2e-21
tr|Q94L36|Q94L36_9ROSI Glutamine synthetase OS=Populus tremula x... 103 4e-21
tr|Q0WWL2|Q0WWL2_ARATH Glutamine synthetase OS=Arabidopsis thali... 102 7e-21
tr|A9PEW3|A9PEW3_POPTR Glutamine synthetase OS=Populus trichocar... 102 7e-21
tr|Q9SWY8|Q9SWY8_CANLI Glutamine synthetase OS=Canavalia lineata... 102 9e-21
tr|Q5QJ64|Q5QJ64_9SOLA Glutamine synthetase OS=Nicotiana attenua... 102 9e-21
tr|Q6IVB8|Q6IVB8_ELAUM Glutamine synthetase OS=Elaeagnus umbella... 102 1e-20
tr|A9PEY1|A9PEY1_POPTR Glutamine synthetase OS=Populus trichocar... 102 1e-20
tr|A1IVX1|A1IVX1_PEA Glutamine synthetase OS=Pisum sativum GN=gs... 102 1e-20
tr|Q9FPT8|Q9FPT8_SOLTU Glutamine synthetase OS=Solanum tuberosum... 101 2e-20
tr|O24335|O24335_RAPSA Glutamine synthetase OS=Raphanus sativus ... 101 2e-20
tr|O22505|O22505_DAUCA Cytosolic glutamine synthetase (Fragment)... 101 2e-20
tr|A9PB10|A9PB10_POPTR Glutamine synthetase OS=Populus trichocar... 101 2e-20
tr|A9NLD8|A9NLD8_PICSI Glutamine synthetase OS=Picea sitchensis ... 101 2e-20
tr|A5AP38|A5AP38_VITVI Putative uncharacterized protein (Chromos... 101 2e-20
tr|Q84L15|Q84L15_9FABA Glutamine synthetase OS=Securigera parvif... 101 2e-20
tr|A7Q8A0|A7Q8A0_VITVI Glutamine synthetase OS=Vitis vinifera GN... 101 2e-20
tr|Q42623|Q42623_BRANA Glutamine synthetase OS=Brassica napus GN... 100 3e-20
tr|O04853|O04853_BRANA Glutamine synthetase (Fragment) OS=Brassi... 100 3e-20
tr|A7J0Q5|A7J0Q5_CUCME Glutamine synthetase OS=Cucumis melo GN=G... 100 3e-20
tr|A9PHX0|A9PHX0_POPTR Glutamine synthetase OS=Populus trichocar... 100 4e-20

>tr|A9TWD3|A9TWD3_PHYPA Glutamine synthetase OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_108913 PE=3 SV=1
Length = 360

Score = 106 bits (265), Expect = 5e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPY VT +VAYTTIL+NP
Sbjct: 304 FSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTGLVAYTTILWNP 356


>tr|A9TWC2|A9TWC2_PHYPA Glutamine synthetase OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_198924 PE=3 SV=1
Length = 360

Score = 105 bits (263), Expect = 8e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPY VT MVAYTTIL++P
Sbjct: 304 FSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMVAYTTILWSP 356


>tr|Q42625|Q42625_BRANA Glutamine synthetase OS=Brassica napus
GN=gln PE=2 SV=1
Length = 356

Score = 105 bits (262), Expect = 1e-21
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSM+A TT+L+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMIAETTLLWNP 356


>tr|Q3L0U0|Q3L0U0_BRARP Glutamine synthetase OS=Brassica rapa subsp.
pekinensis PE=2 SV=1
Length = 356

Score = 105 bits (262), Expect = 1e-21
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSM+A TT+L+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMIAETTLLWNP 356


>tr|O04852|O04852_BRANA Glutamine synthetase OS=Brassica napus
GN=gln PE=2 SV=1
Length = 356

Score = 105 bits (262), Expect = 1e-21
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSM+A TT+L+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMIAETTLLWNP 356


>tr|B5A7Q8|B5A7Q8_BRAOT Cytosolic glutamine synthetase OS=Brassica
oleracea var. italica GN=GS1_1 PE=4 SV=1
Length = 356

Score = 105 bits (262), Expect = 1e-21
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSM+A TT+L+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMIAETTLLWNP 356


>tr|B5A7Q7|B5A7Q7_BRAOB Cytosolic glutamine synthetase OS=Brassica
oleracea var. botrytis GN=GS1_1 PE=4 SV=1
Length = 356

Score = 105 bits (262), Expect = 1e-21
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSM+A TT+L+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMIAETTLLWNP 356


>tr|Q8RW39|Q8RW39_SOLLC Putative glutamine synthase (Fragment)
OS=Solanum lycopersicum GN=gts1 PE=2 SV=1
Length = 79

Score = 104 bits (259), Expect = 2e-21
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSM+A TTIL+NP
Sbjct: 27 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWNP 79


>tr|O24334|O24334_RAPSA Glutamine synthetase OS=Raphanus sativus
GN=gs1 beta PE=2 SV=1
Length = 356

Score = 104 bits (259), Expect = 2e-21
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
F WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY VTSMVA TTIL+NP
Sbjct: 304 FKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMVAETTILWNP 356


>tr|A9RP01|A9RP01_PHYPA Glutamine synthetase OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_160180 PE=3 SV=1
Length = 360

Score = 104 bits (259), Expect = 2e-21
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +3

Query: 3 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYTVTSMVAYTTILYNP 161
FSWGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPY VT M+AYTTIL++P
Sbjct: 304 FSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTGMIAYTTILWSP 356