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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963354
Clone id TST39A01NGRL0016_F01
Library
Length 645
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_F01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCCTTCACAGAGAGATCGTGGGCCGTGGTGCTTTTCGTTTGTCAGACTGTTCAACCTCAG
ACATTGCATTGCTTGCCACCCCAGAAAATCGCTTCTCTCCTCCTCACGTCCTCATTGTAC
AGGTGAAGCTTCTCAGTTAATCGTTTTTAGCCCTTCATTTGTCTGAGCTTCCGTTACGTA
GCCATGGCATTTCCTTCTTCTACTATCTCGGGCTCTCTCTATGGAAGCTCCCCCGAATCC
ATTAGAGGCTTCTGGTCAGATCTCCATGAAAAGCCAGGTTCTCGCAAGAACGTCCATGGC
TTTCACAATACTTCCACTCATAACGTCAACCCTAACACTAACCCAGACTCAGCTGCTCCT
TTTACTTCTCCTCCCCCGACATTCATCTCTTCTGATGAATGGTGGAGGAAGCCCTCTGAC
AAGTCGACTTCGCAACCTTCTGCAATCATATGGCCGAGTTCAGGGCCCTCAAATCTCACA
GGTGACAAGCTCTTTGACTTCCATGAAAGCTCGAATCAAGCTCCCAAAGAGAAGGAATAT
GTGTACATCGACACACCAACAAGTAGAGGGACAGATGGAGGAGTTCCTGTGTATGTTATG
CTTCCGTTGGACACTGTTAGCTCTAACAGCACATTGAACAGGCCC
■■Homology search results ■■ -
sp_hit_id Q8KFL5
Definition sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
Align length 41
Score (bit) 37.0
E-value 0.088
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963354|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_F01, 5'
         (645 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepi...    37   0.088
sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegyp...    33   0.98 
sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens G...    30   8.3  

>sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
           GN=ileS PE=3 SV=1
          Length = 1084

 Score = 37.0 bits (84), Expect = 0.088
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -2

Query: 470 EGPELGHMIAEGCEVDLSEGFLHHSSEEMNVGGGEVKGAAE 348
           +GP+ G + A G   +L EGF+    EEMN+G    KG  E
Sbjct: 481 DGPDSGKLFAVGSVAELREGFIEIDGEEMNLGDALDKGLVE 521


>sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegypti
           GN=VCP PE=1 SV=3
          Length = 471

 Score = 33.5 bits (75), Expect = 0.98
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
 Frame = +1

Query: 400 WWRKPSDKSTSQPSAIIWPSSGP--SNLTG--DKLFDFHESSNQAPKEKEY--------V 543
           +W  P+  +  Q   ++W   GP  S+L G  ++   FH   N++ K++EY        +
Sbjct: 93  FWYVPAKNNREQAPILVWLQGGPGASSLFGMFEENGPFHIHRNKSVKQREYSWHQNHHMI 152

Query: 544 YIDTPTSRG 570
           YID P   G
Sbjct: 153 YIDNPVGTG 161


>sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens
           GN=ADCY9 PE=1 SV=4
          Length = 1353

 Score = 30.4 bits (67), Expect = 8.3
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +1

Query: 457 SSGPSNLTGDKLFDFHESSNQAPKEKEYVYIDTPTSRGTDGGVP 588
           SSG SN    K+     SSN  PK  +Y    + +S G  GGVP
Sbjct: 21  SSGDSNSVRVKINPKQLSSNSHPKHCKYSISSSCSSSGDSGGVP 64
tr_hit_id A9THN6
Definition tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp. patens
Align length 57
Score (bit) 59.7
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963354|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_F01, 5'
         (645 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens sub...    60   1e-07
tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens sub...    54   8e-06
tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens sub...    52   3e-05
tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome...    41   0.071
tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis...    41   0.071
tr|Q9SMW0|Q9SMW0_ARATH Beta-amylase enzyme (Putative beta-amylas...    36   2.3  
tr|Q9LIR6|Q9LIR6_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A...    36   2.3  
tr|Q941A5|Q941A5_ARATH AT4g17090/dl4575c OS=Arabidopsis thaliana...    36   2.3  
tr|Q5F305|Q5F305_SOYBN Beta-amylase OS=Glycine max GN=bmy2 PE=2 ...    36   2.3  
tr|O23553|O23553_ARATH Putative beta-amylase OS=Arabidopsis thal...    36   2.3  
tr|A9PGR1|A9PGR1_POPTR Putative uncharacterized protein OS=Popul...    36   2.3  
tr|A9NVE4|A9NVE4_PICSI Beta-amylase OS=Picea sitchensis PE=2 SV=1      36   2.3  
tr|A7NXM5|A7NXM5_VITVI Chromosome chr5 scaffold_2, whole genome ...    36   2.3  
tr|A5AJ10|A5AJ10_VITVI Putative uncharacterized protein OS=Vitis...    36   2.3  
tr|Q8W2D8|Q8W2D8_BRANA Beta-amylase OS=Brassica napus GN=bmy PE=...    35   3.0  
tr|A7NXN0|A7NXN0_VITVI Beta-amylase OS=Vitis vinifera GN=GSVIVT0...    34   6.7  
tr|B3QQB5|B3QQB5_CHLP8 Isoleucyl-tRNA synthetase OS=Chlorobaculu...    34   6.7  
tr|A0AW49|A0AW49_ARTS2 Heavy metal translocating P-type ATPase O...    34   6.7  
tr|Q94EU9|Q94EU9_SOLTU Beta-amylase PCT-BMYI OS=Solanum tuberosu...    34   8.7  

>tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_222395 PE=3 SV=1
          Length = 507

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
 Frame = +1

Query: 484 DKLFDFHES----SNQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 642
           D +F  H+S     N A + KE+ + +TPTSRG  GGVPV+VMLPLD+V+ N+TL R
Sbjct: 2   DTMFPEHKSLLDWDNTADEWKEHAFHETPTSRGVHGGVPVFVMLPLDSVNINNTLKR 58


>tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_187470 PE=3 SV=1
          Length = 505

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +1

Query: 514 NQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 642
           N + K KE+ + +T TSRG  G VPV+VMLPLD+V+ N+TLNR
Sbjct: 13  NTSDKWKEHAFHETATSRGVHGRVPVFVMLPLDSVNMNNTLNR 55


>tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_118142 PE=3 SV=1
          Length = 483

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 550 DTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 642
           +T TSRG  GGVPV+VMLPLDTVS N+TLNR
Sbjct: 3   ETATSRGVRGGVPVFVMLPLDTVSMNNTLNR 33


>tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015861001
           PE=3 SV=1
          Length = 247

 Score = 40.8 bits (94), Expect = 0.071
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 502 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVSSNSTLNRP 645
           HE++  +   K  V    PT    +G  VPV+VMLPLDTVS    LN+P
Sbjct: 53  HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKP 101


>tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032500 PE=3 SV=1
          Length = 543

 Score = 40.8 bits (94), Expect = 0.071
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 502 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVSSNSTLNRP 645
           HE++  +   K  V    PT    +G  VPV+VMLPLDTVS    LN+P
Sbjct: 53  HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKP 101


>tr|Q9SMW0|Q9SMW0_ARATH Beta-amylase enzyme (Putative beta-amylase)
           OS=Arabidopsis thaliana GN=ct-bmy PE=2 SV=1
          Length = 548

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 574 DGGVPVYVMLPLDTVSSNSTLNRP 645
           D  VPV+VMLPLDTV+ +  LN+P
Sbjct: 83  DASVPVFVMLPLDTVTMSGHLNKP 106


>tr|Q9LIR6|Q9LIR6_ARATH Beta-amylase OS=Arabidopsis thaliana
           GN=At3g23920 PE=2 SV=1
          Length = 575

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +1

Query: 577 GGVPVYVMLPLDTVSSNSTLNR 642
           GGVPV+VM+PLD+V+  +T+NR
Sbjct: 104 GGVPVFVMMPLDSVTMGNTVNR 125


>tr|Q941A5|Q941A5_ARATH AT4g17090/dl4575c OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 376

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 574 DGGVPVYVMLPLDTVSSNSTLNRP 645
           D  VPV+VMLPLDTV+ +  LN+P
Sbjct: 83  DASVPVFVMLPLDTVTMSGHLNKP 106


>tr|Q5F305|Q5F305_SOYBN Beta-amylase OS=Glycine max GN=bmy2 PE=2
           SV=1
          Length = 540

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +1

Query: 583 VPVYVMLPLDTVSSNSTLNRP 645
           VPVYVMLPLDTV+   +LN+P
Sbjct: 78  VPVYVMLPLDTVTMGGSLNKP 98


>tr|O23553|O23553_ARATH Putative beta-amylase OS=Arabidopsis
           thaliana GN=dl4575c PE=3 SV=2
          Length = 498

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 574 DGGVPVYVMLPLDTVSSNSTLNRP 645
           D  VPV+VMLPLDTV+ +  LN+P
Sbjct: 33  DASVPVFVMLPLDTVTMSGHLNKP 56