NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963393
Clone id TST39A01NGRL0016_G17
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_G17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCATGTAGTGTAACTGTGAGCCGCGCACACTCTCTCGTACACACAGCATACTCTCTCTA
GCCCACTAGATATTTTGCTTCTTCTGCTTATACGTTTCTTCTGGTGGGCGTGGTAAGGGT
TAGAGCTAATTGCCTCGCGTTTCTGTGTTCCCATCCGCGATCCATCTCTTCTGCAAGGTT
TACATTTTGGAGAAATGGCGTCCTTGACAGAGAAGGCGACCCACATGAGCAAACCCATGA
TGGGCTCCGGGCAACTAGCCTCTCGGCACTTGGTGAAGAGGACCATGGCTAGCTCACTCG
GAACAGGCTTACGCAGAGGTATGGGTCTTCCCAAGCTGGACATGACCTCACCTAGCAATG
GCGCGGCGGCTCTCAGGTCGCATTCCTTTGGAAAGTCTATCATGTCAGCGGACAGCCCTT
TTGCTCCTTCCCCCAAGTCAAGGGTTCCCCTTTCCCCTGTCTGTATGGCTGCAGCAGCAG
ATGCTGGCGGTAGCGACGCCTCTCCGAGCGTGTCTACCTCATCTGAAGGATTCCTTGCGA
AGTATCCTGCATTGGTGACTGGATTCTTCTTCTTCATGTGGTACTTCCTCAATGTGATCT
TCAACATTTT
■■Homology search results ■■ -
sp_hit_id P49133
Definition sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays
Align length 29
Score (bit) 60.8
E-value 5.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963393|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_G17, 5'
         (610 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chl...    61   5e-09
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chl...    60   1e-08
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chl...    58   3e-08
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chl...    57   6e-08
sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chlor...    54   5e-07
sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, ch...    49   2e-05
sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chl...    45   4e-04
sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=M...    34   0.51 
sp|A1S3Y5|ACPS_SHEAM Holo-[acyl-carrier-protein] synthase OS=She...    34   0.67 
sp|Q2NCF7|ACPS_ERYLH Holo-[acyl-carrier-protein] synthase OS=Ery...    34   0.67 
sp|A5FVX4|ACPS_ACICJ Holo-[acyl-carrier-protein] synthase OS=Aci...    34   0.67 
sp|Q1GT99|ACPS_SPHAL Holo-[acyl-carrier-protein] synthase OS=Sph...    33   0.87 
sp|P59475|ACPS_BUCBP Holo-[acyl-carrier-protein] synthase OS=Buc...    33   0.87 
sp|A8FSE0|ACPS_SHESH Holo-[acyl-carrier-protein] synthase OS=She...    33   1.1  
sp|A3QBT1|ACPS_SHELP Holo-[acyl-carrier-protein] synthase OS=She...    33   1.1  
sp|B0TIW1|ACPS_SHEHH Holo-[acyl-carrier-protein] synthase OS=She...    33   1.1  
sp|Q07Z00|ACPS_SHEFN Holo-[acyl-carrier-protein] synthase OS=She...    33   1.5  
sp|A8H1D1|ACPS_SHEPA Holo-[acyl-carrier-protein] synthase OS=She...    32   1.9  
sp|Q7N1X9|ACPS_PHOLL Holo-[acyl-carrier-protein] synthase OS=Pho...    32   1.9  
sp|Q54K95|ATTY_DICDI Tyrosine aminotransferase OS=Dictyostelium ...    32   3.3  
sp|Q12KI5|ACPS_SHEDO Holo-[acyl-carrier-protein] synthase OS=She...    32   3.3  
sp|Q24751|ATPB_DROVI ATP synthase subunit beta, mitochondrial (F...    32   3.3  
sp|Q2NS17|ACPS_SODGM Holo-[acyl-carrier-protein] synthase OS=Sod...    31   4.3  
sp|A6TCH7|ACPS_KLEP7 Holo-[acyl-carrier-protein] synthase OS=Kle...    31   4.3  
sp|Q869N2|PAKB_DICDI Serine/threonine-protein kinase pakB OS=Dic...    31   5.6  
sp|A1RMC3|ACPS_SHESW Holo-[acyl-carrier-protein] synthase OS=She...    31   5.6  
sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, no...    30   7.4  
sp|Q33568|CYB_TRYBO Cytochrome b OS=Trypanoplasma borreli GN=MT-...    30   7.4  
sp|A4Y4K8|ACPS_SHEPC Holo-[acyl-carrier-protein] synthase OS=She...    30   7.4  
sp|Q1GDH3|ACPS_SILST Holo-[acyl-carrier-protein] synthase OS=Sil...    30   9.6  

>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator,
           chloroplastic OS=Zea mays GN=TPT PE=1 SV=1
          Length = 409

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 522 SEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S GFL KYPALVTGFFFFMWYFLNVIFNI
Sbjct: 96  SVGFLEKYPALVTGFFFFMWYFLNVIFNI 124


>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GFLAKYP LVTGFFFFMWYFLNVIFNI
Sbjct: 95  GFLAKYPFLVTGFFFFMWYFLNVIFNI 121


>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1
          Length = 408

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GF AKYP LVTGFFFFMWYFLNVIFNI
Sbjct: 96  GFFAKYPFLVTGFFFFMWYFLNVIFNI 122


>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator,
           chloroplastic OS=Spinacia oleracea PE=1 SV=1
          Length = 404

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = +3

Query: 507 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S   +  GFL KYPALVTG FFFMWYFLNVIFNI
Sbjct: 85  SSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNI 118


>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator,
           chloroplastic OS=Pisum sativum PE=1 SV=1
          Length = 402

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GF ++YPAL TGFFFF WYFLNVIFNI
Sbjct: 90  GFFSRYPALTTGFFFFTWYFLNVIFNI 116


>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator,
           chloroplastic OS=Brassica oleracea var. botrytis GN=TPT
           PE=2 SV=1
          Length = 407

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = +3

Query: 507 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S   +  GFL KYP LVTG    MWYFLNVIFNI
Sbjct: 88  SAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNI 121


>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator,
           chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1
          Length = 414

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 21/27 (77%), Positives = 21/27 (77%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GF  K   L TGFFFFMWYFLNVIFNI
Sbjct: 103 GFFNK-ATLTTGFFFFMWYFLNVIFNI 128


>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus
           musculus GN=Atg2a PE=1 SV=2
          Length = 1914

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +3

Query: 228 SKPMMGSGQLASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAALRSHSFGKSIMS 407
           S P    G++A   L+  T   SL      G+ L  L   SPS+G + L +H F +   +
Sbjct: 402 STPPHSGGKMAPTPLLDTTRPDSLVKMTLGGVSLTLLQTASPSSGPSDLPTHFFAEFDAA 461

Query: 408 ADSPF 422
            D PF
Sbjct: 462 KDGPF 466


>sp|A1S3Y5|ACPS_SHEAM Holo-[acyl-carrier-protein] synthase
           OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
           GN=acpS PE=3 SV=1
          Length = 125

 Score = 33.9 bits (76), Expect = 0.67
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = +3

Query: 240 MGSGQ----LASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAALR 377
           +GSGQ    LA R   K  +A +LGTG+ RG+    ++  S   GA  +R
Sbjct: 41  VGSGQRELYLAKRFAAKEAVAKALGTGIGRGVSFQHIETYSDEFGAPCVR 90


>sp|Q2NCF7|ACPS_ERYLH Holo-[acyl-carrier-protein] synthase
           OS=Erythrobacter litoralis (strain HTCC2594) GN=acpS
           PE=3 SV=1
          Length = 133

 Score = 33.9 bits (76), Expect = 0.67
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +3

Query: 210 EKATHMSKPMMGSGQLASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAAL 374
           E+A    +P   +G  A R   K   + ++GTG RRG+ +  + + +  +GA  L
Sbjct: 35  ERAKARRRPFTIAGTYAKRFAAKEAFSKAVGTGFRRGVFMKDIGVVNARSGAPTL 89
tr_hit_id Q9FTT3
Definition tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate translocator (Os01g0239200 protein) OS=Oryza sativa subsp. japonica
Align length 39
Score (bit) 62.8
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963393|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_G17, 5'
         (610 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate trans...    63   2e-08
tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator O...    63   2e-08
tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza...    63   2e-08
tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator O...    61   6e-08
tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella paten...    61   6e-08
tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole geno...    60   1e-07
tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis...    60   1e-07
tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza...    60   1e-07
tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator (...    59   2e-07
tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator O...    59   2e-07
tr|Q93ZM3|Q93ZM3_ARATH AT5g46110/MCL19_16 OS=Arabidopsis thalian...    59   2e-07
tr|Q8LB04|Q8LB04_ARATH Phosphate/triose-phosphate translocator O...    59   2e-07
tr|Q2V313|Q2V313_ARATH Uncharacterized protein At5g46110.3 OS=Ar...    59   2e-07
tr|Q9ATY2|Q9ATY2_WHEAT Triose phosphate translocator OS=Triticum...    59   3e-07
tr|B6T5Y2|B6T5Y2_MAIZE Triose phosphate/phosphate translocator O...    58   4e-07
tr|B4FWC0|B4FWC0_MAIZE Putative uncharacterized protein OS=Zea m...    58   4e-07
tr|A9U2X6|A9U2X6_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07
tr|Q60EU8|Q60EU8_ORYSJ Os05g0241200 protein OS=Oryza sativa subs...    57   8e-07
tr|A3B1R0|A3B1R0_ORYSJ Putative uncharacterized protein OS=Oryza...    57   8e-07
tr|A2Y286|A2Y286_ORYSI Putative uncharacterized protein OS=Oryza...    57   8e-07
tr|A7P2G6|A7P2G6_VITVI Chromosome chr1 scaffold_5, whole genome ...    56   2e-06
tr|B7FHQ9|B7FHQ9_MEDTR Putative uncharacterized protein OS=Medic...    55   3e-06
tr|A9NVP1|A9NVP1_PICSI Putative uncharacterized protein OS=Picea...    52   2e-05
tr|Q40568|Q40568_TOBAC Phosphate translocator OS=Nicotiana tabac...    47   0.001
tr|A4S7N4|A4S7N4_OSTLU DMT family transporter: triose phosphate/...    37   0.68 
tr|Q2G9W8|Q2G9W8_NOVAD Holo-(Acyl-carrier-protein) synthase OS=N...    36   1.5  
tr|A2FLJ4|A2FLJ4_TRIVA Putative uncharacterized protein OS=Trich...    36   2.0  
tr|Q2IZM7|Q2IZM7_RHOP2 Putative uncharacterized protein OS=Rhodo...    35   2.6  
tr|A4FFY3|A4FFY3_SACEN Putative antibiotic ABC transporter prote...    35   2.6  
tr|B5AJT1|B5AJT1_GALSU Putative hexose phosphate translocator OS...    35   2.6  

>tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate
           translocator (Os01g0239200 protein) OS=Oryza sativa
           subsp. japonica GN=OSJNBa0086P08.33 PE=4 SV=1
          Length = 417

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 4/39 (10%)
 Frame = +3

Query: 504 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNI
Sbjct: 94  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNI 132


>tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator
           OS=Oryza sativa PE=2 SV=1
          Length = 417

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 4/39 (10%)
 Frame = +3

Query: 504 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNI
Sbjct: 94  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNI 132


>tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001024 PE=4 SV=1
          Length = 277

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 4/39 (10%)
 Frame = +3

Query: 504 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           P+ +TS E    GFL KYPAL+TGFFFFMWYFLNVIFNI
Sbjct: 59  PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVIFNI 97


>tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator
           OS=Mesembryanthemum crystallinum GN=TPT PE=2 SV=1
          Length = 404

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +3

Query: 507 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNI
Sbjct: 85  SAGEAKVGFLQKYPALVTGFFFFMWYFLNVIFNI 118


>tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_227804 PE=4 SV=1
          Length = 440

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 522 SEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           ++GFLAKYPALVTGFFFF WYFLNVIFNI
Sbjct: 126 AQGFLAKYPALVTGFFFFAWYFLNVIFNI 154


>tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00003047001
           PE=4 SV=1
          Length = 406

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +3

Query: 507 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNI
Sbjct: 87  SAGDAKIGFLDKYPALVTGFFFFMWYFLNVIFNI 120


>tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028555 PE=4 SV=1
          Length = 443

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +3

Query: 507 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVIFNI 608
           S   +  GFL KYPALVTGFFFFMWYFLNVIFNI
Sbjct: 87  SAGDAKIGFLDKYPALVTGFFFFMWYFLNVIFNI 120


>tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01091 PE=4 SV=1
          Length = 348

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GFL KYPAL+TGFFFFMWYFLNVIFNI
Sbjct: 37  GFLEKYPALITGFFFFMWYFLNVIFNI 63


>tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator
           (At5g46110/MCL19_16) OS=Arabidopsis thaliana
           GN=At5g46110 PE=2 SV=1
          Length = 410

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GFLAKYP LVTGFFFFMWYFLNVIFNI
Sbjct: 98  GFLAKYPWLVTGFFFFMWYFLNVIFNI 124


>tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 426

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +3

Query: 528 GFLAKYPALVTGFFFFMWYFLNVIFNI 608
           GFLAKYP LVTGFFFFMWYFLNVIFNI
Sbjct: 98  GFLAKYPWLVTGFFFFMWYFLNVIFNI 124