| DK963405 |
| Clone id |
TST39A01NGRL0016_H05 |
| Library |
TST39 |
| Length |
718 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_H05. 5' end sequence. |
| Accession |
DK963405 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL443Contig1 |
| Sequence |
GTGAACCCAGCCTCAATCTCTTTCGCTCTTTCCGAACGTGAGAATGGGGCAGCCATTACC TGACAGTTCAAGGGGATCCACGTCATTGGCAGCATCGGAAGAGGCAAAGCAGGCCGCTTG CTGCAATGGCAACACGTCCAACACTTCTTCTGTGCAGCATGTGTTTGTGTACGGTAACTC CAGGCCTGACATCAGCCCCCCTCTTTCTGGCGAAGCGGTGCAAGCCAGGCGCGCCTGGCT TCTTGGAGGTCGTCTTTACTCCTGCAATTCTGGTGGAGTGAGTCGCCCTGCTTTGAGACT CGAGGAAGCAGGCCATGCTGTTCTCGGTTACACAATGTCTCTTGGTACTTCTGGTAATGT TGGAAGGTTGCTTGACATGTTTGAACGGAGAGAATATTCTCCGGACTTTTATGATCGAGA AGTTGTTGAGGTAGTGACAGAGGGAGGAGAACGTGTGCAATCCTATGTTTACCATTGCCA AGAAGTTGATCTATCANATCCTGTGCATGGTGGGGATTGGCTGCAACATGTACAACACTA GGCAGCCATGCGAGTATGATGTAAACTTGCTCGAGTAGCACTGTTTCTCTATGGTGCTAT AGGGGACCTTCCAAGCTGAATTTGAGTTGTAAAAACTGCACTTAAAATAATCAGGGACAA AACTGGATATTTATTTGGTAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9W7C2 |
| Definition |
sp|Q9W7C2|TBX5_XENLA T-box transcription factor TBX5 OS=Xenopus laevis |
| Align length |
90 |
| Score (bit) |
34.3 |
| E-value |
0.63 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9P198 |
| Definition |
tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
177 |
| Score (bit) |
130.0 |
| E-value |
6.0e-29 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963405|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_H05, 5' (679 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea... 130 6e-29 tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II... 37 1.5 tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.0 tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II O... 36 2.0 tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II O... 36 2.0 tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II O... 36 2.6 tr|B8GR23|B8GR23_9GAMM Transcription-repair coupling factor OS=T... 35 3.4 tr|A1D8H1|A1D8H1_NEOFI R3H and G-patch domain protein, putative ... 35 3.4 tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II... 35 5.8 tr|B0ESS4|B0ESS4_ENTDI Protein serine/threonine kinase, putative... 35 5.8 tr|B7ZRZ7|B7ZRZ7_XENLA T-box transcription factor Tbx5 OS=Xenopu... 34 7.5 tr|Q1B4D2|Q1B4D2_MYCSS Acyl-CoA dehydrogenase-like protein OS=My... 34 7.5 tr|A3Q4S2|A3Q4S2_MYCSJ Acyl-CoA dehydrogenase domain protein OS=... 34 7.5 tr|A1UKQ6|A1UKQ6_MYCSK Acyl-CoA dehydrogenase domain protein OS=... 34 7.5 tr|A9I9A0|A9I9A0_BORPD Putative membrane protein OS=Bordetella p... 34 9.7 tr|Q8KAS2|Q8KAS2_CHLTE Putative uncharacterized protein OS=Chlor... 34 9.8 tr|Q66GC8|Q66GC8_YERPS ADP-heptose--LPS heptosyltransferase II O... 34 9.8 tr|Q1CD10|Q1CD10_YERPN ADP-heptose--LPS heptosyltransferase II O... 34 9.8 tr|Q1C275|Q1C275_YERPA ADP-heptose--LPS heptosyltransferase II O... 34 9.8 tr|Q0WKN5|Q0WKN5_YERPE ADP-heptose--LPS heptosyltransferase II O... 34 9.8 tr|B2JYP1|B2JYP1_YERPB Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|B1JQW5|B1JQW5_YERPY Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|A9R682|A9R682_YERPG Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|A7FCU2|A7FCU2_YERP3 Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|A4TSC9|A4TSC9_YERPP ADP-heptose--LPS heptosyltransferase II O... 34 9.8 tr|Q8D1S4|Q8D1S4_YERPE ADP-heptose--lps heptosyltransferase II O... 34 9.8 tr|B2PV99|B2PV99_PROST Putative uncharacterized protein OS=Provi... 34 9.8 tr|B0HYY9|B0HYY9_YERPE Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|B0HLD7|B0HLD7_YERPE Lipopolysaccharide heptosyltransferase II... 34 9.8 tr|B0HAF3|B0HAF3_YERPE Lipopolysaccharide heptosyltransferase II... 34 9.8
>tr|A9P198|A9P198_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 130 bits (328), Expect = 6e-29 Identities = 74/177 (41%), Positives = 102/177 (57%), Gaps = 16/177 (9%) Frame = +2
Query: 44 MGQPLPDSSRGSTSLAASEEAKQA-----ACCNGNTSNTSSVQ----------HVFVYGN 178 MG PL + S S++AS + A NGN+++++ V H+F+YG+ Sbjct: 1 MGIPLKNEESSSASISASSPVNHSSYHANASANGNSNSSNGVDSSHSSSGAPSHIFLYGD 60
Query: 179 SRPDI-SPPLSGEAVQARRAWLLGGRLYSCNSGGVSRPALRLEEAGHAVLGYTMSLGTSG 355 SRPD S + +Q +RAWLLG RLYS ++GGV R A++LEE+GHAVLGY +S S Sbjct: 61 SRPDAPSNTQNLPGLQNKRAWLLGSRLYSFSTGGVRRAAVKLEESGHAVLGYAVSTNDSM 120
Query: 356 NVGRLLDMFERREYSPDFYDXXXXXXXXXXXXXXQSYVYHCQEVDLSXPVHGGDWLQ 526 + RLLD FERREY PD Y+ QSY+YH +V+ S + GDWL+ Sbjct: 121 GITRLLDEFERREYLPDLYERDIVEVISERGERLQSYIYHRPDVNPSNLIPTGDWLR 177
>tr|A8GLC9|A8GLC9_SERP5 Lipopolysaccharide heptosyltransferase II OS=Serratia proteamaculans (strain 568) GN=Spro_4826 PE=4 SV=1 Length = 348
Score = 36.6 bits (83), Expect = 1.5 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 14/68 (20%) Frame = +2
Query: 56 LPDSSRG-STSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDI 193 L D SRG +LA + +QA A C+ SN S + HV +YG S PD Sbjct: 235 LDDDSRGFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDF 294
Query: 194 SPPLSGEA 217 +PPLS +A Sbjct: 295 TPPLSDKA 302
>tr|Q4D804|Q4D804_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053508149.65 PE=4 SV=1 Length = 253
Score = 36.2 bits (82), Expect = 2.0 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -3
Query: 278 LHQNCRSKDDLQEARRAWLAPLRQK--EGG*CQAWSYRTQTHAAQKKCWTCCHCSKRPAL 105 L + CR +D L + RRAW + Q GG ++ R Q + CW C C PA+ Sbjct: 172 LSRRCREQDVLTQPRRAWSVTMAQSAVAGG---IFTSRRQQRESCSCCWCRC-CLLWPAM 227
Query: 104 PLPMLPM 84 P+ + P+ Sbjct: 228 PIIVCPL 234
>tr|B4F131|B4F131_PROMH ADP-heptose--LPS heptosyltransferase II OS=Proteus mirabilis (strain HI4320) GN=waaF PE=4 SV=1 Length = 350
Score = 36.2 bits (82), Expect = 2.0 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Frame = +2
Query: 59 PDSSRGSTSLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISP 199 PD+ +LA +QA A C SN S + HV +YG S PD +P Sbjct: 238 PDAQAACINLAGETSLEQAVNLIAACKAVVSNDSGLMHVAAALERPLVALYGPSSPDFTP 297
Query: 200 PLSGEA 217 PLS +A Sbjct: 298 PLSDKA 303
>tr|A1JHX5|A1JHX5_YERE8 ADP-heptose--LPS heptosyltransferase II OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rfaF PE=4 SV=1 Length = 354
Score = 36.2 bits (82), Expect = 2.0 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 16/76 (21%) Frame = +2
Query: 50 QPLPDSSR-------GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNS 181 Q L +S+R G TSL + A CN SN S + HV +YG S Sbjct: 233 QALDESAREYCLNLAGQTSL--DQAVVMIAACNAVVSNDSGLMHVAAALNKPLVALYGPS 290
Query: 182 RPDISPPLSGEAVQAR 229 PD +PPLS +A R Sbjct: 291 SPDFTPPLSDKATVIR 306
>tr|B2VL46|B2VL46_ERWT9 ADP-heptose--lps heptosyltransferase II OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=waaF PE=4 SV=1 Length = 348
Score = 35.8 bits (81), Expect = 2.6 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 13/58 (22%) Frame = +2
Query: 83 SLAASEEAKQA----ACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 217 +LA + +QA ACC+ SN S + H+ +YG S PD +PPLS +A Sbjct: 245 NLAGETQLEQAVILLACCHAIVSNDSGLMHIAAALDRPLIALYGPSSPDFTPPLSEKA 302
>tr|B8GR23|B8GR23_9GAMM Transcription-repair coupling factor OS=Thioalkalivibrio sp. HL-EbGR7 GN=Tgr7_1358 PE=4 SV=1 Length = 1157
Score = 35.4 bits (80), Expect = 3.4 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +2
Query: 224 ARRAWLLGGRLYSCNSGGVSRPALR--LEEAGHAVLGYTMSLGTSGNVGRLLDMFERREY 397 A RAWL G L N + R ALR LE+AG+ + M G G L+D+F Sbjct: 124 APRAWLQGRVLMLANGDRLDRDALRRNLEQAGYHCVSQVMEHGEFAVRGSLIDLFPMGSL 183
Query: 398 SP 403 P Sbjct: 184 EP 185
>tr|A1D8H1|A1D8H1_NEOFI R3H and G-patch domain protein, putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_071860 PE=4 SV=1 Length = 658
Score = 35.4 bits (80), Expect = 3.4 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Frame = +2
Query: 89 AASEEAKQAACCNGNTSNTSSVQHVF--VYGNSRPDISPPLSGEAVQARRAWLLGGRLYS 262 A S+ K+ A +G TSSV ++ V G S P+I G A+ R W LG L + Sbjct: 578 ARSQNNKKLAKASGGRP-TSSVSYMEGDVVGASAPEIGAENKGRAMLERMGWSLGTPLGA 636
Query: 263 CNSGGVSRPALRLEEAGHAVLG 328 N+ G+ P + + A LG Sbjct: 637 INNKGILLPVAHVVKNSKAGLG 658
>tr|Q2NQV6|Q2NQV6_SODGM Lipopolysaccharide heptosyltransferase II OS=Sodalis glossinidius (strain morsitans) GN=SG2194 PE=4 SV=1 Length = 349
Score = 34.7 bits (78), Expect = 5.8 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Frame = +2
Query: 74 GSTSLAASEEAKQAACCNGNTSNTSSVQHVF---------VYGNSRPDISPPLSGEA 217 G TSL + A C G SN S + HV +YG S PD +PPLS +A Sbjct: 248 GQTSL--EQAVTLIAACQGIVSNDSGLMHVASALDRPLVALYGPSSPDFTPPLSHQA 302
>tr|B0ESS4|B0ESS4_ENTDI Protein serine/threonine kinase, putative OS=Entamoeba dispar SAW760 GN=EDI_147040 PE=4 SV=1 Length = 1590
Score = 34.7 bits (78), Expect = 5.8 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 14/98 (14%) Frame = -1
Query: 664 SFVPDYFKCSFYNSNSAWKV----PYSTIEKQCYSSKFTSYSHGCL---VLYMLQP---I 515 S +P + K FYN SAW++ PYS I +SK G LY+ P + Sbjct: 345 SILPPFTKLEFYNK-SAWEIYQDHPYSFIFDTLSTSKSLFKQFGMFDESKLYIHSPPEEL 403
Query: 514 PTMHRX**INFLAMV----NIGLHTFSSLCHYLNNFSI 413 H FL V N+ +HTFS C YL F I Sbjct: 404 SLFHF-----FLGEVMFDPNVTIHTFSGECFYLATFEI 436
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