DK963409 |
Clone id |
TST39A01NGRL0016_H09 |
Library |
TST39 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_H09. 5' end sequence. |
Accession |
DK963409 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1279Contig1 |
Sequence |
GTGAAAGGCTAGTAAGTATCTCGTGCACTGAGTACCGTGCCACACATCGATGGCAGCTAC GCCTCCTCCTGCTTCCACTCATGCGCCTGTCCCTGCCCCCCCGCCTGATGTAGAGAAGCA GCTACCCCTTCGTGACATTCCGGGTGGGTATGGGCTTCCTGTGCTGGGCGCCATCAAGGA TCGCCTGGACTTCTTCTGGTTTCAAGGAGAAAAGGAGTACTGGGCGAGTCGCCGCAAGAA GTTCAAGAGCACTGTCTTTCGGACTCACGTGCCGCCCAGCCCGCCCGCTTTTGCTGCCAA CAGGGTCATCATGCTTCTCGACCAGAAGAGCTTCCCTGTCCTCTTCGACATGGACAAGGT AGAGAAGAAAGATGTGTTGCTAGCCAATTACATGCCCCGAACCTCGTTTTATGGCGGCAT TCGGCCCTGCGTCTACTTGGATCCATCTGAGGAGCGGCATACAAAGCTCAAGTCTTTCAT TATGTCTGTGCTGAAAGCAAAGGCCAGCCGGTGGATCCCAGAGACACACAGGGCAACAAT GGAGATCTTTGCATCATGGGAGGCAAAGCTTGCAGCGAAGCCCGAAGGATTCGAAATCTC CAGTGAGACAGGGCAAGTTGCCCTTAATGTGTTGATTAGAACACTCTTTGGCGCAGATCC ATCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96242 |
Definition |
sp|Q96242|CP74A_ARATH Cytochrome P450 74A, chloroplastic OS=Arabidopsis thaliana |
Align length |
183 |
Score (bit) |
165.0 |
E-value |
2.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963409|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_H09, 5' (666 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q96242|CP74A_ARATH Cytochrome P450 74A, chloroplastic OS=Arab... 165 2e-40 sp|P48417|CP74_LINUS Cytochrome P450 74A, chloroplastic OS=Linum... 165 2e-40 sp|Q40778|C74A2_PARAR Cytochrome P450 74A2 OS=Parthenium argenta... 154 5e-37 sp|Q7XYS3|C74A2_ORYSJ Cytochrome P450 74A2 OS=Oryza sativa subsp... 149 2e-35 sp|Q6Z6L1|C74A3_ORYSJ Cytochrome P450 74A3 OS=Oryza sativa subsp... 130 8e-30 sp|Q7Y0C8|C74A1_ORYSJ Cytochrome P450 74A1, chloroplastic OS=Ory... 126 1e-28 sp|Q6Z6K9|C74A4_ORYSJ Cytochrome P450 74A4 OS=Oryza sativa subsp... 118 2e-26 sp|O53687|Y282_MYCTU Uncharacterized protein Rv0282/MT0295 OS=My... 35 0.27 sp|A0LI67|DNLJ_SYNFM DNA ligase OS=Syntrophobacter fumaroxidans ... 35 0.36 sp|Q6ZPE2|MTMR5_MOUSE Myotubularin-related protein 5 OS=Mus musc... 33 1.4 sp|Q9CD28|Y2537_MYCLE Uncharacterized protein ML2537 OS=Mycobact... 33 1.8 sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=1 33 1.8 sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus G... 32 2.3 sp|Q94IW5|C90D2_ORYSJ Cytochrome P450 90D2 OS=Oryza sativa subsp... 32 2.3 sp|Q501D8|C79B3_ARATH Tryptophan N-hydroxylase 2 OS=Arabidopsis ... 32 3.9 sp|P40200|TACT_HUMAN T-cell surface protein tactile OS=Homo sapi... 31 6.7 sp|Q1IDL9|RUMA_PSEE4 23S rRNA (uracil-5-)-methyltransferase rumA... 31 6.7 sp|P97334|NKX23_MOUSE Homeobox protein Nkx-2.3 OS=Mus musculus G... 31 6.7 sp|A6Q6Q7|MNMG_SULNB tRNA uridine 5-carboxymethylaminomethyl mod... 31 6.7 sp|Q1I3X6|METK_PSEE4 S-adenosylmethionine synthetase OS=Pseudomo... 31 6.7 sp|Q9Y2Y9|KLF13_HUMAN Krueppel-like factor 13 OS=Homo sapiens GN... 31 6.7 sp|Q1XDU1|FABH_PORYE 3-oxoacyl-[acyl-carrier-protein] synthase 3... 31 6.7 sp|Q88D60|METK_PSEPK S-adenosylmethionine synthetase OS=Pseudomo... 30 8.8 sp|B0KLZ1|METK_PSEPG S-adenosylmethionine synthetase OS=Pseudomo... 30 8.8 sp|A5WA00|METK_PSEP1 S-adenosylmethionine synthetase OS=Pseudomo... 30 8.8 sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamylo... 30 8.8 sp|Q6ZUB1|CI079_HUMAN FAM75-like protein C9orf79 OS=Homo sapiens... 30 8.9
>sp|Q96242|CP74A_ARATH Cytochrome P450 74A, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3 Length = 518
Score = 165 bits (418), Expect = 2e-40 Identities = 83/183 (45%), Positives = 116/183 (63%) Frame = +2
Query: 116 KQLPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKEYWASRRKKFKSTVFRTHVPPSPPAFA 295 K LP+R+IPG YGLP++G IKDR D+F+ QG +E++ SR +K+ STV+R ++PP Sbjct: 50 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAE 109
Query: 296 ANRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLKS 475 +V+ LLD KSFPVLFD+DKVEKKD+ YMP T GG R YLDPSE +H KLK+ Sbjct: 110 NPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKN 169
Query: 476 FIMSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLFGA 655 + +LK+ +R PE E+F S E +L+ K + + + A N L R +G Sbjct: 170 LLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKA-DFGGSSDGTAFNFLARAFYGT 228
Query: 656 DPS 664 +P+ Sbjct: 229 NPA 231
>sp|P48417|CP74_LINUS Cytochrome P450 74A, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1 Length = 536
Score = 165 bits (417), Expect = 2e-40 Identities = 87/183 (47%), Positives = 113/183 (61%) Frame = +2
Query: 113 EKQLPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKEYWASRRKKFKSTVFRTHVPPSPPAF 292 E LP+R IPG YGLP +G I+DRLD+F+ QG +E++ SR +K+KSTV+R ++PP P Sbjct: 67 ETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPFIA 126
Query: 293 AANRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLK 472 + RVI+LLD KSFPVLFDM KVEKKD+ YMP T GG R YLDPSE HTKLK Sbjct: 127 SNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLK 186
Query: 473 SFIMSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLFG 652 + +++K + IPE + ++ E LA K + + Q A N L R FG Sbjct: 187 QLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDLATKGKA-AFNDPAEQAAFNFLSRAFFG 245
Query: 653 ADP 661 P Sbjct: 246 VKP 248
>sp|Q40778|C74A2_PARAR Cytochrome P450 74A2 OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2 Length = 473
Score = 154 bits (388), Expect = 5e-37 Identities = 83/181 (45%), Positives = 114/181 (62%), Gaps = 2/181 (1%) Frame = +2
Query: 125 PLRDIPGGYGLPVLGAIKDRLDFFWFQGEK-EYWASRRKKFKSTVFRTHVPPSPPAFAAN 301 PLR+IPG YG+P IKDRL++F+ G + EY+ SR +K++STVFR ++PP P + Sbjct: 7 PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNP 66
Query: 302 RVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLKSFI 481 +VI+LLD KSFP+LFD+ KVEKKD+ YMP T GG R YLDPSE RH +LK+ + Sbjct: 67 KVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLL 126
Query: 482 MSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETG-QVALNVLIRTLFGAD 658 +LK ++R IP+ E+F EA+LA G ++ G Q A L R F ++ Sbjct: 127 FFMLKNSSNRVIPQFETTYTELFEGLEAELA--KNGKAAFNDVGEQAAFRFLGRAYFNSN 184
Query: 659 P 661 P Sbjct: 185 P 185
>sp|Q7XYS3|C74A2_ORYSJ Cytochrome P450 74A2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2 Length = 478
Score = 149 bits (375), Expect = 2e-35 Identities = 73/181 (40%), Positives = 109/181 (60%) Frame = +2
Query: 122 LPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKEYWASRRKKFKSTVFRTHVPPSPPAFAAN 301 LP R +PG YG+P + A++DRLDF++ QG+ +Y+ SR +++ STV R +VPP P Sbjct: 7 LPRRPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFMARDP 66
Query: 302 RVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLKSFI 481 RV+ LLD KSFPVLFD+ KVEK+DV +MP TS GG R C YLDPSE H K+K + Sbjct: 67 RVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLL 126
Query: 482 MSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLFGADP 661 +S+L ++ ++P + + E++LA+ + ++ + + FG P Sbjct: 127 LSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVRP 186
Query: 662 S 664 S Sbjct: 187 S 187
>sp|Q6Z6L1|C74A3_ORYSJ Cytochrome P450 74A3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1 Length = 500
Score = 130 bits (326), Expect = 8e-30 Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Frame = +2
Query: 122 LPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKEYWASRRKKFK-STVFRTHVPPSPPAFAA 298 LP+R+IPGGYG+P ++DRLD+F+FQG +EY+ SR + +TV R ++PP P Sbjct: 27 LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGN 86
Query: 299 NRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLKSF 478 RV+ LLD +SF VL D V+K D L YMP + +GG RP +LD ++ RH K+K Sbjct: 87 PRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRV 146
Query: 479 IMSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLFGAD 658 +MS+ A+ P A +F + EA L A E + + L+ LFG + Sbjct: 147 VMSLAAARMHHVAPAFRAAFAAMFDAVEAGLGA---AVEFNKLNMRYMLDFTCAALFGGE 203
Query: 659 P 661 P Sbjct: 204 P 204
>sp|Q7Y0C8|C74A1_ORYSJ Cytochrome P450 74A1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1 Length = 512
Score = 126 bits (316), Expect = 1e-28 Identities = 69/185 (37%), Positives = 103/185 (55%), Gaps = 1/185 (0%) Frame = +2
Query: 113 EKQLPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKE-YWASRRKKFKSTVFRTHVPPSPPA 289 +++LPLR +PG YG PV+GAI+DR ++F+ G ++ ++A+R + +STV R ++PP P Sbjct: 42 KRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFV 101
Query: 290 FAANRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKL 469 RV+ LLD SFPVLFD V+K D+ +MP T GG R YLDPSE H L Sbjct: 102 ARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPL 161
Query: 470 KSFIMSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLF 649 K+ + +L + + IP+ ++F E LA + + A L + L Sbjct: 162 KTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKA-DFGVHNDAAAFGFLCQGLL 220
Query: 650 GADPS 664 G DP+ Sbjct: 221 GRDPA 225
>sp|Q6Z6K9|C74A4_ORYSJ Cytochrome P450 74A4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1 Length = 510
Score = 118 bits (296), Expect = 2e-26 Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Frame = +2
Query: 122 LPLRDIPGGYGLPVLGAIKDRLDFFWFQGEKEYWASRRKKFK-STVFRTHVPPSPPAFAA 298 L +R+IPGGYG+P L ++DRLD+++FQG E++ SR + +TV R ++PP P Sbjct: 27 LLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNMPPGPFLAGD 86
Query: 299 NRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEERHTKLKSF 478 RV+ LLD +SF VL D V+K D L +MP + +GG RP +LD ++ RH K+K Sbjct: 87 PRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRV 146
Query: 479 IMSVLKAKASRWIPETHRATMEIFASWEAKLAAKPEGFEISSETGQVALNVLIRTLFGAD 658 +MS+ A+ P A +F +A L A E + + L+ LFG Sbjct: 147 VMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAGGP-VEFNKLNMRYMLDFTCAALFGGA 205
Query: 659 P 661 P Sbjct: 206 P 206
>sp|O53687|Y282_MYCTU Uncharacterized protein Rv0282/MT0295 OS=Mycobacterium tuberculosis GN=Rv0282 PE=3 SV=1 Length = 631
Score = 35.4 bits (80), Expect = 0.27 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -2
Query: 260 ERQCS*TSCGDSPSTPFLLETRRSPGDP*WRPAQEAHTHPECHEGVAASLHQA 102 E+ S TS G +T +E R P DP P E P HE AA LH+A Sbjct: 285 EQALSDTSFGIVTTTAGRIEARTDPWDPATEPGAEDFVDPAAHERKAALLHEA 337
>sp|A0LI67|DNLJ_SYNFM DNA ligase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=ligA PE=3 SV=2 Length = 675
Score = 35.0 bits (79), Expect = 0.36 Identities = 30/94 (31%), Positives = 44/94 (46%) Frame = +2
Query: 278 SPPAFAANRVIMLLDQKSFPVLFDMDKVEKKDVLLANYMPRTSFYGGIRPCVYLDPSEER 457 SPPA A R + +D+K F L + + + + L AN PR + G +R LDPS Sbjct: 170 SPPARIAVRGEVYMDRKDFAAL-NRSREQAGEPLFAN--PRNAAAGSLR---QLDPSVTA 223
Query: 458 HTKLKSFIMSVLKAKASRWIPETHRATMEIFASW 559 LK+F V + R+ +T T+E W Sbjct: 224 ARSLKAFFYGVGEVSGYRF--KTQAQTLEQLRRW 255
>sp|Q6ZPE2|MTMR5_MOUSE Myotubularin-related protein 5 OS=Mus musculus GN=Sbf1 PE=1 SV=2 Length = 1867
Score = 33.1 bits (74), Expect = 1.4 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 9/92 (9%) Frame = +1
Query: 145 WVWASCAGRHQGSPGLLLVSRRKGVLGESPQ-EVQEHC----LSDSRAAQPARFCCQ--- 300 W+ A + QG+P + RR V P + E C ++ +R + R C Sbjct: 515 WIVDQAAAKMQGAPPAVKAERRSTVPSGPPMTAILERCSGPHINSARRLEVVRNCISYVF 574
Query: 301 QGHHASRPEELPCPLRHGQGR-EERCVASQLH 393 +G + LP LR +GR RC+A +LH Sbjct: 575 EGKMLEAKKLLPAVLRALKGRAARRCLAHELH 606
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8L6G2 |
Definition |
tr|Q8L6G2|Q8L6G2_PHYPA Allene oxide synthase OS=Physcomitrella patens |
Align length |
182 |
Score (bit) |
194.0 |
E-value |
5.0e-48 |
Report |
|