BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963417|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_H19, 5'
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6GMV2|SMYD5_HUMAN SET and MYND domain-containing protein 5 O...    32   1.1  
sp|Q3TYX3|SMYD5_MOUSE SET and MYND domain-containing protein 5 O...    30   4.2  
sp|Q9CK01|RAPA_PASMU RNA polymerase-associated protein rapA OS=P...    30   5.4  
sp|P07598|PHFL_DESVH Periplasmic [Fe] hydrogenase large subunit ...    30   5.4  
sp|Q9Z8M9|DNAA1_CHLPN Chromosomal replication initiator protein ...    30   7.1  

>sp|Q6GMV2|SMYD5_HUMAN SET and MYND domain-containing protein 5
           OS=Homo sapiens GN=SMYD5 PE=1 SV=2
          Length = 418

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 238 RACNACLSALSRTSKNAMRVHGWKGQLL 155
           RAC+ CL AL +  +NA R+ G  GQ+L
Sbjct: 68  RACDHCLRALEKAEENAQRLTGKPGQVL 95


>sp|Q3TYX3|SMYD5_MOUSE SET and MYND domain-containing protein 5
           OS=Mus musculus GN=Smyd5 PE=2 SV=2
          Length = 416

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 238 RACNACLSALSRTSKNAMRVHGWKGQLL 155
           RAC+ CL AL +  +NA R+ G   Q+L
Sbjct: 68  RACDHCLRALEKAEENAQRLTGKPSQIL 95


>sp|Q9CK01|RAPA_PASMU RNA polymerase-associated protein rapA
           OS=Pasteurella multocida GN=rapA PE=3 SV=1
          Length = 967

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -3

Query: 163 QLLRPICQELVLELAAMLGQNSHTPDTRVRKLKPASQDLPSLTLLLAFPKQ 11
           QLL      L+++ A  LG + H P    + ++  ++ +P++ LL A P+Q
Sbjct: 271 QLLEAGFDMLIVDEAHHLGWSEHNPSLEYQLVEQLARQIPAVLLLTATPEQ 321


>sp|P07598|PHFL_DESVH Periplasmic [Fe] hydrogenase large subunit
           OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
           29579 / NCIMB 8303) GN=hydA PE=1 SV=1
          Length = 421

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -2

Query: 182 SSWVERTTVETNLPGTCFRISCDAWTKLAHTRHAS--EKVKTCKSRPSFLNAA 30
           S +VER T ++++P   F   C  W K A T +        TCKS P  +N A
Sbjct: 158 SEFVERLTKKSDMPLPQFTSCCPGWQKYAETYYPELLPHFSTCKS-PIGMNGA 209


>sp|Q9Z8M9|DNAA1_CHLPN Chromosomal replication initiator protein
           dnaA 1 OS=Chlamydia pneumoniae GN=dnaA1 PE=3 SV=1
          Length = 460

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +2

Query: 230 AGSFGLMSLKMEICHGQ---ISSKTVDGLSQRSNGYLNRNIAHVDNSYSFSQRKVSLSVK 400
           AGS  L  LK+     Q   +S +++ G SQ     L R +A       F ++K+SLS  
Sbjct: 347 AGSVRLTPLKIIRNVAQYYGVSQESILGRSQSREYVLPRQVAMY-----FCRQKLSLSYV 401

Query: 401 RIGNIFPRSETS 436
           RIG++F R  ++
Sbjct: 402 RIGDVFSRDHST 413

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963417|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_H19, 5'
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6QD08|A6QD08_SULNB Putative uncharacterized protein OS=Sulfu...    36   0.84 
tr|Q3A2K8|Q3A2K8_PELCD Two component, sigma54 specific, transcri...    33   5.4  
tr|A0Y2K3|A0Y2K3_9GAMM ATP-dependent helicase HepA OS=Alteromona...    33   9.3  

>tr|A6QD08|A6QD08_SULNB Putative uncharacterized protein
           OS=Sulfurovum sp. (strain NBC37-1) GN=SUN_2433 PE=4 SV=1
          Length = 684

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
 Frame = +2

Query: 242 GLMSLKMEICHGQISSKTVDGLS-QRSNGYLNRNI----AHVDNSYSFSQRKVSLSVKRI 406
           G +  ++E+CH   +   VDG S    +G LN  +    A ++N  S +Q +++ + KRI
Sbjct: 43  GEIDNELELCHWGETGIKVDGYSYNEDDGILNLFVSVFSADIENK-SLTQTEINQAFKRI 101

Query: 407 GNIFPRSETSSKYSSL 454
            N F RS + + YS L
Sbjct: 102 ENFFQRSFSKTYYSKL 117


>tr|Q3A2K8|Q3A2K8_PELCD Two component, sigma54 specific,
           transcriptional regulator, Fis family OS=Pelobacter
           carbinolicus (strain DSM 2380 / Gra Bd 1) GN=Pcar_2160
           PE=4 SV=1
          Length = 451

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/55 (29%), Positives = 33/55 (60%)
 Frame = -3

Query: 424 PWKDITNPFDRKRDLSLRKAVAVVDMSNVSIKVAITSL*KTIYCLRRNLTVTNLH 260
           PW+   +P DR +D+SL+KAV+ ++   +   +++T   +T      ++++ NLH
Sbjct: 388 PWEIRRHPRDRGQDMSLKKAVSRIEPEYIRRALSVTGGNRTKAAQLLDISLRNLH 442


>tr|A0Y2K3|A0Y2K3_9GAMM ATP-dependent helicase HepA
           OS=Alteromonadales bacterium TW-7 GN=ATW7_12171 PE=4
           SV=1
          Length = 964

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 136 LVLELAAMLGQNSHTPDTRVRKLKPASQDLPSLTLLLAFPKQ 11
           LV++ A  L  N+  P T  +++   SQD+P L LL A P Q
Sbjct: 276 LVVDEAHHLSINNGKPSTEYQRMAELSQDIPGLILLTATPDQ 317