DK963428 |
Clone id |
TST39A01NGRL0016_I06 |
Library |
TST39 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_I06. 5' end sequence. |
Accession |
DK963428 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1784Contig1 |
Sequence |
GCATTGTTCGATACCAGCAATCGACACTTGGTCTCTTCATCTGTGCAGGTGTGTTGTCGG CTTTGTCGCGTCCTGTTATAGCAGACGAACCCAAAGCAAAGTGTATACGATCTCGTGTAC AGGGTTTCGATCGTCTCATCAAGCAGAATTCCGTCTTTAGAGCCAGCCGGAAGAAGGAAA GACAGGCAATGGCATCGTATCTCGTGCTAGTGTTGACCTTGCTTTTCGCCATAGCCCGGA TCTCTGCTGCAGACCCAACAGCGTATGAAGTGCTTGCAAGTTTCGGATTTCCAGAGGGTC TCTTGCCCAAGACGGTCGAAAATTCAGGCGAAGATTACATTCTAGATGGCAGTGGAGCAT TTGAGCTGCATCTTGAGGGGTCCTGCCGGTTCACCATACCTGGTAGCTATGAGGTCAAGT ATGATTCCCGCATTGCTGGGAAAATTGAATCAGATCGCCTTCATAGCCTTAGTGGCATAT CTGTTAACATTTTCTACGTGTGGTGGAACATTGATGCCATTACTGTCAGTGGACAAGATC TCACTTTTCAGGTTGGACCCTTCTCTTCCAGCTTTCCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q852K8 |
Definition |
sp|Q852K8|SAP14_ORYSJ Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica |
Align length |
101 |
Score (bit) |
31.6 |
E-value |
3.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q0F2 |
Definition |
tr|A7Q0F2|A7Q0F2_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
133 |
Score (bit) |
107.0 |
E-value |
6.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963428|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_I06, 5' (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q0F2|A7Q0F2_VITVI Chromosome chr7 scaffold_42, whole genome... 107 6e-22 tr|A5B257|A5B257_VITVI Putative uncharacterized protein OS=Vitis... 105 2e-21 tr|A9RHQ8|A9RHQ8_PHYPA Predicted protein OS=Physcomitrella paten... 101 3e-20 tr|B6SJU2|B6SJU2_MAIZE Putative uncharacterized protein OS=Zea m... 97 8e-19 tr|Q60E83|Q60E83_ORYSJ Os05g0362300 protein OS=Oryza sativa subs... 96 1e-18 tr|A2Y3R4|A2Y3R4_ORYSI Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|A9PCC0|A9PCC0_POPTR Putative uncharacterized protein OS=Popul... 95 3e-18 tr|Q8L4C8|Q8L4C8_ORYSJ cDNA clone:J023010O20, full insert sequen... 94 4e-18 tr|B6SJ69|B6SJ69_MAIZE Putative uncharacterized protein OS=Zea m... 94 4e-18 tr|A7PRX7|A7PRX7_VITVI Chromosome chr14 scaffold_27, whole genom... 94 4e-18 tr|A2WS41|A2WS41_ORYSI Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|B6SIE4|B6SIE4_MAIZE Putative uncharacterized protein OS=Zea m... 94 5e-18 tr|B6TJ92|B6TJ92_MAIZE Putative uncharacterized protein OS=Zea m... 93 9e-18 tr|A9NQR6|A9NQR6_PICSI Putative uncharacterized protein OS=Picea... 93 9e-18 tr|Q2QWE5|Q2QWE5_ORYSJ Os12g0198000 protein OS=Oryza sativa subs... 92 2e-17 tr|B6TTK9|B6TTK9_MAIZE Putative uncharacterized protein OS=Zea m... 92 2e-17 tr|A2ZIX0|A2ZIX0_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|Q53M14|Q53M14_ORYSJ cDNA clone:002-181-D06, full insert seque... 92 3e-17 tr|A2ZCZ0|A2ZCZ0_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|B8LMI7|B8LMI7_PICSI Putative uncharacterized protein OS=Picea... 91 6e-17 tr|B4FUP2|B4FUP2_MAIZE Putative uncharacterized protein OS=Zea m... 91 6e-17 tr|A9NLS0|A9NLS0_PICSI Putative uncharacterized protein OS=Picea... 91 6e-17 tr|A9NSU2|A9NSU2_PICSI Putative uncharacterized protein OS=Picea... 90 1e-16 tr|A9NL33|A9NL33_PICSI Putative uncharacterized protein OS=Picea... 90 1e-16 tr|A9PEM4|A9PEM4_POPTR Putative uncharacterized protein OS=Popul... 86 1e-15 tr|A2Y4T2|A2Y4T2_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|O81297|O81297_ARATH Putative uncharacterized protein AT4g0236... 86 1e-15 tr|B6T6K0|B6T6K0_MAIZE Putative uncharacterized protein OS=Zea m... 86 1e-15 tr|Q8LDM9|Q8LDM9_ARATH Putative uncharacterized protein OS=Arabi... 84 4e-15 tr|Q0DI28|Q0DI28_ORYSJ Os05g0421100 protein OS=Oryza sativa subs... 84 4e-15
>tr|A7Q0F2|A7Q0F2_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028027001 PE=4 SV=1 Length = 162
Score = 107 bits (266), Expect = 6e-22 Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 3/133 (2%) Frame = +3
Query: 189 MASYLVLVLTLLFAIARISAAD--PTAYEVLASFGFPEGLLPKTVENSGEDYILD-GSGA 359 M+ VLVL ++F + ++A D PTAYE+L S+ FP GLLPK Y LD +G Sbjct: 1 MSRPAVLVLCVIFLSSIVTADDDSPTAYEILQSYNFPMGLLPK----GALGYDLDKDTGK 56
Query: 360 FELHLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSGQD 539 F + GSC F++ GSY++KY S I+G I ++L LSGISV + ++W NI +T +G D Sbjct: 57 FNAYFNGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDD 116
Query: 540 LTFQVGPFSSSFP 578 + F VG S++FP Sbjct: 117 MEFSVGIASAAFP 129
>tr|A5B257|A5B257_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014708 PE=4 SV=1 Length = 162
Score = 105 bits (261), Expect = 2e-21 Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 3/133 (2%) Frame = +3
Query: 189 MASYLVLVLTLLFAIARISAAD--PTAYEVLASFGFPEGLLPKTVENSGEDYILD-GSGA 359 M+ VLVL ++F + ++A D PTAYE+L S+ FP GLLPK Y LD +G Sbjct: 1 MSRPAVLVLCVIFLSSIVTADDDSPTAYEILQSYNFPMGLLPK----GALGYDLDKDTGK 56
Query: 360 FELHLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSGQD 539 F + GSC F++ GSY++KY S I+G I ++L LSG SV + ++W NI +T +G D Sbjct: 57 FNAYFNGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDD 116
Query: 540 LTFQVGPFSSSFP 578 + F VG S++FP Sbjct: 117 MEFSVGIASAAFP 129
>tr|A9RHQ8|A9RHQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175070 PE=4 SV=1 Length = 160
Score = 101 bits (251), Expect = 3e-20 Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Frame = +3
Query: 204 VLVLTLLFAI-ARISAADPT-AYEVLASFGFPEGLLPKTVENSGEDYILDGSGAFELHLE 377 VL+LT L A AR+ ++D + YE L +FGFPEGLLP TV N YIL+ SG F L+LE Sbjct: 10 VLLLTFLSASQARLISSDASDVYEKLETFGFPEGLLPHTVTN----YILEPSGKFTLYLE 65
Query: 378 GSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITV-SGQDLTFQV 554 G C I Y + YD I G + RL L GISV +YVWW+I I + L F++ Sbjct: 66 GRCPVLIEDKYPLIYDKVITGMLSYGRLQGLKGISVKAYYVWWSITGIALGDDHSLFFEI 125
Query: 555 GPFSSSFP 578 G S+ FP Sbjct: 126 GILSARFP 133
>tr|B6SJU2|B6SJU2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 175
Score = 96.7 bits (239), Expect = 8e-19 Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 8/134 (5%) Frame = +3
Query: 198 YLVLVLTLLFAIARISAADPTAYEVLASFGFPEGLLPKTVENSGEDYILDGSGAFELHLE 377 +L+LV+ A + I++A PTAYE LA + FP G+LPK V D + +GAF L+ Sbjct: 6 FLLLVVVAAAAASGIASAKPTAYEALADYDFPPGILPKGVVAYTVD---NATGAFTATLD 62
Query: 378 GS--------CRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSG 533 S C F+I GSY ++Y ++I GKI D L L G+SV + + W NI +T G Sbjct: 63 ASASGAGSSICEFSIEGSYSLRYQTKITGKISPDHLTDLQGVSVKVLFFWLNIVEVTRHG 122
Query: 534 QDLTFQVGPFSSSF 575 +L F VG S+ F Sbjct: 123 DNLEFSVGIASADF 136
>tr|Q60E83|Q60E83_ORYSJ Os05g0362300 protein OS=Oryza sativa subsp. japonica GN=P0692D12.12 PE=2 SV=1 Length = 173
Score = 96.3 bits (238), Expect = 1e-18 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 4/129 (3%) Frame = +3
Query: 201 LVLVLTLLFAIARISAAD--PTAYEVLASFGFPEGLLPKTVENSGEDYILDGSGAFE--L 368 L+L++ LL A +AA+ PTAYE LA+F FP G+LPK V + D D +G F L Sbjct: 8 LLLLVALLVAGGGGAAAETKPTAYEALATFDFPPGILPKGVVSYTLD---DATGDFTATL 64
Query: 369 HLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSGQDLTF 548 + +C F+I GSY ++Y R++G+I +DRL +L G+SV I ++W NI +T G +L F Sbjct: 65 NTTSTCAFSIQGSYSLRYQRRLSGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGF 124
Query: 549 QVGPFSSSF 575 VG S+ F Sbjct: 125 SVGIASADF 133
>tr|A2Y3R4|A2Y3R4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19647 PE=4 SV=1 Length = 173
Score = 96.3 bits (238), Expect = 1e-18 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 4/129 (3%) Frame = +3
Query: 201 LVLVLTLLFAIARISAAD--PTAYEVLASFGFPEGLLPKTVENSGEDYILDGSGAFE--L 368 L+L++ LL A +AA+ PTAYE LA+F FP G+LPK V + D D +G F L Sbjct: 8 LLLLVALLVAGGGGAAAETKPTAYEALATFDFPPGILPKGVVSYTLD---DATGDFTATL 64
Query: 369 HLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSGQDLTF 548 + +C F+I GSY ++Y R++G+I +DRL +L G+SV I ++W NI +T G +L F Sbjct: 65 NTTSTCAFSIQGSYSLRYQRRLSGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGF 124
Query: 549 QVGPFSSSF 575 VG S+ F Sbjct: 125 SVGIASADF 133
>tr|A9PCC0|A9PCC0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 167
Score = 94.7 bits (234), Expect = 3e-18 Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Frame = +3
Query: 186 AMASYLVLVLTLLFAIARISAAD--PTAYEVLASFGFPEGLLPKTVENSGEDYILD-GSG 356 ++ + L LL ++A S D PT Y+VL+ + FP G+LPK Y LD +G Sbjct: 2 SITANLTFFFVLLSSLAISSFTDNLPTTYDVLSGYNFPIGILPK----GATGYDLDKATG 57
Query: 357 AFELHLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSGQ 536 F +L GSC F++ GSY++KY S ++G I +RL LSG+SV I + W +I + G Sbjct: 58 RFRAYLNGSCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKILFFWLDIVEVVRKGD 117
Query: 537 DLTFQVGPFSSSF 575 +L F VG S+SF Sbjct: 118 ELEFSVGITSASF 130
>tr|Q8L4C8|Q8L4C8_ORYSJ cDNA clone:J023010O20, full insert sequence OS=Oryza sativa subsp. japonica GN=B1103C09.17 PE=2 SV=1 Length = 160
Score = 94.4 bits (233), Expect = 4e-18 Identities = 55/136 (40%), Positives = 73/136 (53%), Gaps = 5/136 (3%) Frame = +3
Query: 186 AMASYLVLVLTLLFAIARISAA---DPTAYEVLASFGFPEGLLPKTVENSGEDYILD-GS 353 A A+ L L+ + + R A D TAY+ L GFP GLLP V Y LD GS Sbjct: 13 AAAAALFLLASAALPVVRSDAGGDGDVTAYDELRHRGFPLGLLPANVRG----YTLDSGS 68
Query: 354 GAFELHLEGSCRFTIP-GSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVS 530 G F + L SCR +P GSY + R+ G+++ R+ LSGI V F+ WW+I I Sbjct: 69 GDFAVDLASSCRIVLPAGSYLASFSDRLTGRLDDRRISGLSGIRVRAFFRWWSITGIRAD 128
Query: 531 GQDLTFQVGPFSSSFP 578 G +L F+VG S+ FP Sbjct: 129 GDELVFEVGSVSAKFP 144
>tr|B6SJ69|B6SJ69_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 175
Score = 94.4 bits (233), Expect = 4e-18 Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 8/134 (5%) Frame = +3
Query: 198 YLVLVLTLLFAIARISAADPTAYEVLASFGFPEGLLPKTVENSGEDYILDGSGAFELHLE 377 +L+L+ A + I++A PTAYE LA + FP G+LPK V D + +GAF L+ Sbjct: 6 FLLLIAVAAAAASGIASAKPTAYEALADYDFPPGILPKGVVAYTVD---NATGAFTATLD 62
Query: 378 GS--------CRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVSG 533 S C F+I GSY ++Y ++I GKI D L L G+SV + + W NI +T G Sbjct: 63 ASASGAGSSICEFSIEGSYSLRYQTKITGKISPDHLTDLQGVSVKVLFFWLNIVEVTRHG 122
Query: 534 QDLTFQVGPFSSSF 575 +L F VG ++ F Sbjct: 123 DNLEFSVGIAAADF 136
>tr|A7PRX7|A7PRX7_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022675001 PE=4 SV=1 Length = 170
Score = 94.4 bits (233), Expect = 4e-18 Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Frame = +3
Query: 174 KERQAMASYLVLVLTLLFAIARISAAD-PTAYEVLASFGFPEGLLPKTVENSGEDYILDG 350 K ++ ++ L L L+ + S+ D PT YEVL + FP GLLPK V G D + Sbjct: 5 KTQRLISLAATLCLILIHSTPASSSNDSPTVYEVLQDYNFPVGLLPKGV--IGYD-LNTS 61
Query: 351 SGAFELHLEGSCRFTIPGSYEVKYDSRIAGKIESDRLHSLSGISVNIFYVWWNIDAITVS 530 +G F GSC F++ GSY++KY S I G I +L SL G+SV +F++W +I + S Sbjct: 62 TGKFSASFNGSCSFSLEGSYQLKYKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRS 121
Query: 531 GQDLTFQVGPFSSSF 575 G D+ F VG S+ F Sbjct: 122 GDDIDFSVGIASAGF 136
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