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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963445
Clone id TST39A01NGRL0016_I23
Library
Length 615
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_I23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGTGTGTGTGCGCGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGCTCCCTTACTC
AAGATCCAGCCATGTCTGAAGAGCACCACCATCGCCACCACTTTGGGCATCACAAGCAAG
AGGATGACGCTCCTCCACCCCCGCCTGCCGATTACACCTACTCCGAGGATGCCGTGCCCA
TCCTGTACACAGAATATTATGATGGGCCGCGCCGCCCTTCTGGCTACAGCACTACCACCG
AAACCACCGAGGTGGTTGTGAAAACAGACGAGCATGGAAAGAAACATGAGAAGGAGCACA
AGACCAAAGAGCACGTTGGAGAAGCTCTTGGCGCAGCAGCTGGCGCTTATGCCTTGTATG
AGCGTCATGAAGCGAAGAAGGACTCAGAGCATGCAGGGCGCCACAAGATGGAAGAGCGGA
TAGCAGAGGCTGTTGTTGTGAGTGCCGGTGGGTATGCGCTCCATGAGCACCATGAGAAGA
AAGAGTCAGTGGAGGAGGAAGAGGGTCATAAGAAGAAACACCACTTCTTCTAAGTGCCTT
TGTTTTTGCTTGATGTTTTGTCATGGTGATACATGTACATATCAAACATGTTGTTTTCTG
TGCTGTAACCAAATA
■■Homology search results ■■ -
sp_hit_id Q08655
Definition sp|Q08655|ASR1_SOLLC Abscisic stress-ripening protein 1 OS=Solanum lycopersicum
Align length 32
Score (bit) 48.1
E-value 3.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963445|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_I23, 5'
         (615 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08655|ASR1_SOLLC Abscisic stress-ripening protein 1 OS=Solan...    48   3e-05
sp|P37219|ASR2_SOLLC Abscisic stress-ripening protein 2 OS=Solan...    43   0.001
sp|P37220|ASR3_SOLLC Abscisic stress-ripening protein 3 OS=Solan...    40   0.012
sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1        34   0.69 
sp|P52167|GATB_BOMMO Transcription factor BCFI OS=Bombyx mori GN...    31   5.8  
sp|Q24206|BRC4_DROME Broad-complex core protein isoform 6 OS=Dro...    31   5.8  
sp|Q4P2B6|SEC31_USTMA Protein transport protein SEC31 OS=Ustilag...    30   7.6  
sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xen...    30   7.6  
sp|P25236|SEPP1_RAT Selenoprotein P OS=Rattus norvegicus GN=Sepp...    30   9.8  
sp|Q5R8W9|SEPP1_PONAB Selenoprotein P OS=Pongo abelii GN=SEPP1 P...    30   9.8  
sp|Q5R7P7|TAF9B_PONAB Transcription initiation factor TFIID subu...    30   9.9  
sp|Q9HBM6|TAF9B_HUMAN Transcription initiation factor TFIID subu...    30   9.9  

>sp|Q08655|ASR1_SOLLC Abscisic stress-ripening protein 1 OS=Solanum
           lycopersicum GN=ASR1 PE=2 SV=1
          Length = 115

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHA +HK+EE IA A  V AGG+A
Sbjct: 54  KHEAKKDPEHAHKHKIEEEIAAAAAVGAGGFA 85


>sp|P37219|ASR2_SOLLC Abscisic stress-ripening protein 2 OS=Solanum
           lycopersicum GN=ASR2 PE=4 SV=1
          Length = 114

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +H+AKKD EHA +HK+EE I     V AGG+A
Sbjct: 56  KHKAKKDPEHAHKHKIEEEIMAVAAVGAGGFA 87


>sp|P37220|ASR3_SOLLC Abscisic stress-ripening protein 3 OS=Solanum
           lycopersicum GN=ASR3 PE=4 SV=2
          Length = 108

 Score = 39.7 bits (91), Expect = 0.012
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +H+AKKD E+A +HK+++ IA    V AGG+A
Sbjct: 54  KHKAKKDPENAHKHKIKQEIAAVAAVGAGGFA 85


>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
          Length = 5376

 Score = 33.9 bits (76), Expect = 0.69
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
 Frame = -1

Query: 300  CAPSH----VSFHARLFSQPPRWFRW*CCSQKGGAAHHNILCTGWARHPRSRCNRQAGVE 133
            C PS      SF  R F    +WF   C       +H++ILC  W    +  C+ + GV 
Sbjct: 1602 CVPSSQCGCTSFQGRYFKLQEQWFNPDCKEICTCESHNHILCKPWKCKAQEACSYKNGV- 1660

Query: 132  ERHPLACDAQ 103
                L C AQ
Sbjct: 1661 ----LGCHAQ 1666


>sp|P52167|GATB_BOMMO Transcription factor BCFI OS=Bombyx mori
           GN=GATA-B PE=2 SV=1
          Length = 508

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = +2

Query: 53  PYSRSSHV*RAPPSP---PLWASQARG*RSSTPACRLHLLRGCRAHPVHRIL*WAAPPFW 223
           PYS        PP+P   P  AS   G  SS P  R   LR     P+H       PP+ 
Sbjct: 48  PYSHLDDSLFKPPTPGSAPPTASTCAGVPSSAPRRRPRRLRP--PAPLHYDDYAPPPPYS 105

Query: 224 LQHYHRNHRGGCENRRAWKET*EGAQDQRA 313
             H+H   +GG  N  A + T    Q +RA
Sbjct: 106 HDHHHHLEQGGGGNGAASRCTAVRLQQRRA 135


>sp|Q24206|BRC4_DROME Broad-complex core protein isoform 6
           OS=Drosophila melanogaster GN=br PE=1 SV=2
          Length = 880

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -1

Query: 534 LRRSGVSSYDPLPPPLTLSSHGAHGAHTHRHSQQQPLLSALPSCGALHA----LSPSSLH 367
           L R G +   P PPP    SH       H H  Q P LS LPS   LHA    LS ++ H
Sbjct: 575 LERPGGTGSPPPPPP----SH-------HSHFGQHP-LSLLPSHHQLHATHHELSAAAAH 622

Query: 366 DAH 358
            AH
Sbjct: 623 HAH 625


>sp|Q4P2B6|SEC31_USTMA Protein transport protein SEC31 OS=Ustilago
            maydis GN=SEC31 PE=3 SV=1
          Length = 1416

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
 Frame = -1

Query: 498  PPPLTLSSHGAHGAHTHRHSQQ--QPLLSALPSCGA 397
            P P+  +++GA+GA +++ + Q  QP++ A P+ GA
Sbjct: 1047 PEPVQTNAYGAYGAQSYQSAYQPAQPMIPAAPAFGA 1082


>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia
           OS=Xenopus tropicalis GN=rnf111 PE=2 SV=1
          Length = 954

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 31/90 (34%)
 Frame = -1

Query: 555 HQAKTKALRRSGVSSYD---------PLPPPLTLSSHGAHGAHT--------------HR 445
           HQ+ T   +   +  Y          P P PL+   H  H  +T              H 
Sbjct: 579 HQSTTSTAQTMAIDGYGSSMVAQAQPPPPTPLSSCRHYMHAPYTSLTRPLHHQTSSCPHS 638

Query: 444 HSQ--------QQPLLSALPSCGALHALSP 379
           HS         Q P +S LPS  A HA+ P
Sbjct: 639 HSNVGDYVIAHQVPFISPLPSLAATHAVPP 668


>sp|P25236|SEPP1_RAT Selenoprotein P OS=Rattus norvegicus GN=Sepp1
           PE=1 SV=2
          Length = 385

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = +2

Query: 212 PPFWLQHYHRNHRGGCENRRAWKET*E-GAQDQRAXXXXXXXXXXXLCLV*AS*SEEGLR 388
           PP  L H+H +H+   ++R+   E+ + GA +               C+           
Sbjct: 239 PPSGLHHHHHHHKHKGQHRQGHLESUDMGASEGLQLSLAQRKLURRGCI--------NQL 290

Query: 389 ACRAPQDGRADSRGCCCECR 448
            C+  ++  A +  CCC CR
Sbjct: 291 LCKLSEESGAATSSCCCHCR 310


>sp|Q5R8W9|SEPP1_PONAB Selenoprotein P OS=Pongo abelii GN=SEPP1 PE=2
           SV=2
          Length = 381

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 392 CRAPQDGRADSRGCCCECR 448
           C+ P+D     R CCC CR
Sbjct: 287 CKLPKDSELAPRSCCCHCR 305
tr_hit_id Q5MDK9
Definition tr|Q5MDK9|Q5MDK9_PSEMZ Water deficit inducible LP3-like protein (Fragment) OS=Pseudotsuga menziesii var. menziesii
Align length 32
Score (bit) 52.8
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963445|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_I23, 5'
         (615 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5MDK9|Q5MDK9_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDK0|Q5MDK0_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDJ5|Q5MDJ5_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDJ3|Q5MDJ3_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDH9|Q5MDH9_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDH7|Q5MDH7_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q5MDH5|Q5MDH5_PSEMZ Water deficit inducible LP3-like protein ...    53   2e-05
tr|Q6S9Z8|Q6S9Z8_GINBI ASR protein OS=Ginkgo biloba PE=2 SV=1          50   8e-05
tr|A9NP62|A9NP62_PICSI Putative uncharacterized protein OS=Picea...    50   1e-04
tr|Q9ZRB6|Q9ZRB6_SOLTU Ci21A protein OS=Solanum tuberosum GN=ci2...    50   1e-04
tr|Q6IT49|Q6IT49_MUSAC Abscisic stress ripening protein-like pro...    49   2e-04
tr|B8YQ15|B8YQ15_MUSAC Abscisic stress ripening protein OS=Musa ...    49   2e-04
tr|A9NQS8|A9NQS8_PICSI Putative uncharacterized protein OS=Picea...    49   2e-04
tr|A9P0F2|A9P0F2_PICSI Putative uncharacterized protein OS=Picea...    49   3e-04
tr|Q9SEW0|Q9SEW0_LILLO Anth (Pollen-specific desiccation-associa...    48   4e-04
tr|Q2QJV3|Q2QJV3_SOLCE ASR1 OS=Solanum cheesmanii GN=Asr1 PE=4 SV=1    48   4e-04
tr|Q2QJV2|Q2QJV2_SOLLC ASR1 OS=Solanum lycopersicum var. cerasif...    48   4e-04
tr|Q2QJV1|Q2QJV1_SOLHA ASR1 OS=Solanum habrochaites GN=Asr1 PE=4...    48   4e-04
tr|Q2QJV0|Q2QJV0_SOLPE ASR1 OS=Lycopersicon peruvianum var. humi...    48   4e-04
tr|Q2QJU9|Q2QJU9_SOLCI ASR1 OS=Solanum chilense GN=Asr1 PE=4 SV=1      48   4e-04
tr|Q2QJU8|Q2QJU8_9SOLN ASR1 OS=Solanum corneliomuelleri GN=Asr1 ...    48   4e-04
tr|O82575|O82575_SOLLC Fruit-ripening protein OS=Solanum lycoper...    48   4e-04
tr|Q948L3|Q948L3_SACOF Drought inducible 22 kD protein OS=Saccha...    48   5e-04
tr|Q6EBV8|Q6EBV8_9POAL 22 kDa drought-inducible protein OS=Sacch...    48   5e-04
tr|B4FKG5|B4FKG5_MAIZE Abscisic stress ripening protein 2 OS=Zea...    48   5e-04
tr|A8IK82|A8IK82_MAIZE Dip protein OS=Zea mays PE=4 SV=1               48   5e-04
tr|A9P0G6|A9P0G6_PICSI Putative uncharacterized protein OS=Picea...    47   7e-04
tr|A9NPQ5|A9NPQ5_PICSI Putative uncharacterized protein OS=Picea...    47   7e-04
tr|Q93WZ6|Q93WZ6_PRUPE Abscisic stress ripening-like protein OS=...    47   9e-04
tr|Q9FRV9|Q9FRV9_CALSL Putative ripening protein OS=Calystegia s...    47   0.001

>tr|Q5MDK9|Q5MDK9_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 124

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 93  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 124


>tr|Q5MDK0|Q5MDK0_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 119

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 88  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 119


>tr|Q5MDJ5|Q5MDJ5_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 124

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 93  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 124


>tr|Q5MDJ3|Q5MDJ3_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 124

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 93  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 124


>tr|Q5MDH9|Q5MDH9_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 119

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 88  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 119


>tr|Q5MDH7|Q5MDH7_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 124

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 93  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 124


>tr|Q5MDH5|Q5MDH5_PSEMZ Water deficit inducible LP3-like protein
           (Fragment) OS=Pseudotsuga menziesii var. menziesii PE=4
           SV=1
          Length = 124

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHAGRHK+EE IA A  V +GGYA
Sbjct: 93  KHEAKKDPEHAGRHKIEEEIAAAAAVGSGGYA 124


>tr|Q6S9Z8|Q6S9Z8_GINBI ASR protein OS=Ginkgo biloba PE=2 SV=1
          Length = 181

 Score = 50.4 bits (119), Expect = 8e-05
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD EHA RHK+EE +A A  V AGGYA
Sbjct: 123 KHEAKKDPEHAHRHKIEEEVAAAAAVGAGGYA 154


>tr|A9NP62|A9NP62_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 157

 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYA 458
           +HEAKKD E+AGRHK+EE IA A  V +GGYA
Sbjct: 100 KHEAKKDPENAGRHKIEEEIAAAAAVGSGGYA 131


>tr|Q9ZRB6|Q9ZRB6_SOLTU Ci21A protein OS=Solanum tuberosum GN=ci21A
           PE=4 SV=1
          Length = 109

 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +3

Query: 363 RHEAKKDSEHAGRHKMEERIAEAVVVSAGGYAL 461
           +HEAKKD EHA +HK+EE IA A  V AGG+AL
Sbjct: 53  KHEAKKDPEHAHKHKIEEEIAAAAAVGAGGFAL 85