DK963450 |
Clone id |
TST39A01NGRL0016_J04 |
Library |
TST39 |
Length |
624 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_J04. 5' end sequence. |
Accession |
DK963450 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3Contig1 |
Sequence |
CAGCATGGTCACCCCTGGTGCTGAGTGCAAGGATAGGGCTTCTCCTGAGAAGGTTGCTGA GTACACACTGAACATGCTGAAGAGGAGAGTACCACCTGCAGTGCCTGGAATCATGTTCCT TTCTGGTGGCCAATCCGAAGTGGAAGCTACCTTGAACCTTAATGCGATGAACCAATCCCC CAACCCCTGGCATGTGTCCTTCTCATATGCACGGGCGCTGCAAAACACCGTGCTTAAGAC ATGGGGTGGCAATCCTGAGAATGTGAAGAAGGCACAAACTTCCCTCCTCATCAGAGCGAA GGCCAACTCTTTGGCTCAGCTTGGCAAATACTCAGCAGAGGGAGAGAGTGAAGAGGCCAA GAAGGGTATGTTTGTCGCTGGGTATACATACTAAGAAGATAGTTTGTACCCATTTTGGTT CTGTGATCTGTCCAATCGTGTGAATCACCACCACTCACTATATGCTCTCTGCAGTTGTAT ATGCTGCCTAGTCAGTAAATTGTGAAAGGGATATGAGGTACCAAGTTTTTAATGTTATGG TAAACCTCCATTTGTTGTATGCTGAGCAACTTGATTTGCCCATGTATCTTACATTATGGC AATCAGTTTGTGTTGGCTCTTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q944G9 |
Definition |
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana |
Align length |
130 |
Score (bit) |
228.0 |
E-value |
2.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963450|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_J04, 5' (624 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,... 228 2e-59 sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas... 223 5e-58 sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast... 222 1e-57 sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,... 222 1e-57 sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,... 220 4e-57 sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas... 214 4e-55 sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloropla... 168 2e-41 sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast... 166 9e-41 sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic ... 141 3e-33 sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostel... 137 4e-32 sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 137 6e-32 sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A OS=Rattus n... 136 1e-31 sp|P17784|ALF_ORYSJ Fructose-bisphosphate aldolase cytoplasmic i... 134 3e-31 sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 OS=Caenorh... 134 5e-31 sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A OS=Mus mu... 133 8e-31 sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic ... 132 1e-30 sp|A5A6I5|ALDOA_PANTR Fructose-bisphosphate aldolase A OS=Pan tr... 132 1e-30 sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A OS=Homo s... 132 1e-30 sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A OS=Orycto... 131 2e-30 sp|Q5NVR5|ALDOA_PONAB Fructose-bisphosphate aldolase A OS=Pongo ... 130 4e-30 sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 129 9e-30 sp|P14223|ALF_PLAFA Fructose-bisphosphate aldolase OS=Plasmodium... 129 1e-29 sp|Q7KQL9|ALF_PLAF7 Fructose-bisphosphate aldolase OS=Plasmodium... 129 1e-29 sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic ... 129 1e-29 sp|P07752|ALF_TRYBB Fructose-bisphosphate aldolase, glycosomal O... 129 2e-29 sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C OS=Rattus n... 129 2e-29 sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Fragment... 128 3e-29 sp|P07341|ALDOB_CHICK Fructose-bisphosphate aldolase B OS=Gallus... 128 3e-29 sp|P08440|ALF_MAIZE Fructose-bisphosphate aldolase, cytoplasmic ... 127 4e-29 sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type... 127 5e-29
>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1 Length = 398
Score = 228 bits (581), Expect = 2e-59 Identities = 111/130 (85%), Positives = 119/130 (91%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAE KDRA+PE+VA YTL +L+ RVPPAVPGIMFLSGGQSEVEATLNLNAMNQ+P Sbjct: 269 SMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP 328
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTWGG PENV AQT+LL RAKANSLAQLGKY+ EGESEEAK Sbjct: 329 NPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAK 388
Query: 362 KGMFVAGYTY 391 +GMFV GYTY Sbjct: 389 EGMFVKGYTY 398
>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1 Length = 356
Score = 223 bits (569), Expect = 5e-58 Identities = 109/130 (83%), Positives = 118/130 (90%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAE KD+ASP KVAEYTLN+L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN+SP Sbjct: 227 SMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSP 286
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTWGG PENVK AQ +LL RAK+NSLAQLGKY +GESEEAK Sbjct: 287 NPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAK 346
Query: 362 KGMFVAGYTY 391 K +FV GY+Y Sbjct: 347 KELFVKGYSY 356
>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2 Length = 388
Score = 222 bits (565), Expect = 1e-57 Identities = 105/130 (80%), Positives = 118/130 (90%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAECKDRA+PE+V++YTL +L RR+PPAVPGIMFLSGGQSEVEAT NLNAMNQ P Sbjct: 259 SMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGP 318
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTWGG PENVK AQ +LL+RAKANSLAQLGKY+++GE+ EAK Sbjct: 319 NPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAK 378
Query: 362 KGMFVAGYTY 391 +GMFV Y Y Sbjct: 379 EGMFVKNYVY 388
>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1 Length = 391
Score = 222 bits (565), Expect = 1e-57 Identities = 107/130 (82%), Positives = 120/130 (92%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAE K++ASPE VA++TL MLKRRVPPAVPGIMFLSGGQSE EATLNLNAMNQSP Sbjct: 262 SMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSP 321
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQN+VL+TW G PE ++ +Q +LL+RAKANSLAQLGKYSAEGE+E+AK Sbjct: 322 NPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAK 381
Query: 362 KGMFVAGYTY 391 KGMFV GYTY Sbjct: 382 KGMFVKGYTY 391
>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2 Length = 399
Score = 220 bits (561), Expect = 4e-57 Identities = 107/130 (82%), Positives = 116/130 (89%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAE DRA+PE+VA YTL +L+ R+PPAVPGIMFLSGGQSE+EATLNLNAMNQ+P Sbjct: 270 SMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAP 329
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTWGG ENVK AQ LL RAKANSLAQLGKY+ EGESEEAK Sbjct: 330 NPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAK 389
Query: 362 KGMFVAGYTY 391 +GMFV GYTY Sbjct: 390 EGMFVKGYTY 399
>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2 Length = 349
Score = 214 bits (544), Expect = 4e-55 Identities = 107/130 (82%), Positives = 115/130 (88%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMVTPGAE KD+ASP KVAEYTLN+L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN+SP Sbjct: 221 SMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSP 280
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTWGG PENVK AQ +LL RAK+NSLAQLGKY +GESEEAK Sbjct: 281 NPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAK 340
Query: 362 KGMFVAGYTY 391 K GY+Y Sbjct: 341 KDC-CQGYSY 349
>sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1 Length = 374
Score = 168 bits (426), Expect = 2e-41 Identities = 87/130 (66%), Positives = 100/130 (76%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 +MVTPGA+CK++A P KVAEYTL ML R PP VPGIMFLSGGQSE+E+TLNLNAMNQSP Sbjct: 245 AMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSP 303
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARAL NTVLKTW +P V+ + + R KANS AQ GKY A E +EA Sbjct: 304 NPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAA 362
Query: 362 KGMFVAGYTY 391 +GM+ G Y Sbjct: 363 QGMYEKGKGY 372
>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3 Length = 394
Score = 166 bits (420), Expect = 9e-41 Identities = 91/131 (69%), Positives = 98/131 (74%), Gaps = 1/131 (0%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 SMV PGA + PE+VA+Y L +L RR P VPGIM LSGGQSEVEATLNLNAMNQSP Sbjct: 267 SMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSP 326
Query: 182 NPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 361 NPWHVSFSYARALQNT LKTW ENVK + AK+NSLAQLGKY+ EGESEE K Sbjct: 327 NPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEERK 383
Query: 362 KGMFV-AGYTY 391 K MFV A TY Sbjct: 384 KDMFVKATLTY 394
>sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1 Length = 357
Score = 141 bits (355), Expect = 3e-33 Identities = 74/132 (56%), Positives = 90/132 (68%), Gaps = 2/132 (1%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--Q 175 ++VTPG+E K + +PE +AEYT+ L+R VP AVPG+MFLSGGQSE EATLNLNAMN + Sbjct: 227 NIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLE 285
Query: 176 SPNPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEE 355 + PW +SFSY RALQ + LK W G ENV KAQ L RAK NS A LGKY + Sbjct: 286 TKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGAD 345
Query: 356 AKKGMFVAGYTY 391 A + + V Y Y Sbjct: 346 ASESLHVKDYKY 357
>sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1 Length = 357
Score = 137 bits (345), Expect = 4e-32 Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 1/131 (0%) Frame = +2
Query: 2 SMVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSP 181 +MV G +C +A+ E++ ++T+ L+R VPPA+ G++FLSGGQ+E+EAT NLNAMN P Sbjct: 227 NMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLP 286
Query: 182 N-PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEA 358 N PW +SFSY RALQ +V+ TW G NV+ A+ L RAK NSLAQLGKY+ E + A Sbjct: 287 NRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSA 346
Query: 359 KKGMFVAGYTY 391 + ++V Y Y Sbjct: 347 SESLYVKDYKY 357
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RX76 |
Definition |
tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase OS=Physcomitrella patens subsp. patens |
Align length |
130 |
Score (bit) |
240.0 |
E-value |
4.0e-62 |
Report |
|