DK963461 |
Clone id |
TST39A01NGRL0016_J16 |
Library |
TST39 |
Length |
613 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_J16. 5' end sequence. |
Accession |
DK963461 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL939Contig1 |
Sequence |
CACGCACGCACGCACGCACATGGTCTACCTACAAAGTGTAACCCAGATCGTGGCCCGTGA CCTAGCTTGACGCCGCTCTCAGCTTCTTCAACGAGCTCACCAGCAGCTCCATTTTGCTAC CAAAATGCTACGATTTGCAAGAACCATGCCTGTGAAATGGAAGGTGCTAGTAGCATCTTC TTTGCAGCATGTCCCGCCATCTTCAGCATGTGCCCTTGCCTTCCAGAGGAACGAATCAGG GAAGGCGGACCCTCTGGAGGAGCATGGCTTTGAGAGCACCACTATTTCTGACATTTTAAA AGGAAAGGGGGAGAAAGCAGATGGTTCTTGGCTCTTTTGCAAGACAGATGATACTGTCTA TGATGCTGTGAAATCTATGACTCAGCACAATGTAGGAGCTCTTCTAGTGGTGAAGCCGAC TGGAAAGGAGTCCATAGCAGGGATTGTTACAGAAAGAGATTACCTGCGCAAGATAATTGT TCAAGGCAGATCATCCAAAACAACGAAAGTTGGAGATATCATGACGGAAGAGAACAAGCT CATTACAGTAACCCCGGAGACTCGGGTTCTTCAAGCGATGCAGCTGATGACAGACAACAG GATTCGGCACATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LEV3 |
Definition |
sp|Q9LEV3|UMP3_ARATH Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana |
Align length |
153 |
Score (bit) |
214.0 |
E-value |
4.0e-55 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0T1V6 |
Definition |
tr|A0T1V6|A0T1V6_SOLSC CBS domain-containing protein OS=Solenostemon scutellarioides |
Align length |
146 |
Score (bit) |
220.0 |
E-value |
6.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963461|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_J16, 5' (613 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0T1V6|A0T1V6_SOLSC CBS domain-containing protein OS=Solenost... 220 6e-56 tr|A9NPZ1|A9NPZ1_PICSI Putative uncharacterized protein OS=Picea... 218 2e-55 tr|B7FJN7|B7FJN7_MEDTR Putative uncharacterized protein OS=Medic... 217 5e-55 tr|Q676Z5|Q676Z5_HYAOR CBS1 (Fragment) OS=Hyacinthus orientalis ... 216 8e-55 tr|A9NN81|A9NN81_PICSI Putative uncharacterized protein OS=Picea... 215 2e-54 tr|A7NXX2|A7NXX2_VITVI Chromosome chr6 scaffold_3, whole genome ... 210 5e-53 tr|A9RR66|A9RR66_PHYPA Predicted protein OS=Physcomitrella paten... 207 3e-52 tr|B4G1D2|B4G1D2_MAIZE CBS domain protein OS=Zea mays PE=2 SV=1 206 9e-52 tr|Q10D87|Q10D87_ORYSJ CBS domain containing protein, expressed ... 205 1e-51 tr|A3AMH0|A3AMH0_ORYSJ Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A2XLS8|A2XLS8_ORYSI Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A9REC2|A9REC2_PHYPA Predicted protein OS=Physcomitrella paten... 205 2e-51 tr|Q84R32|Q84R32_ORYSJ Os03g0737000 protein OS=Oryza sativa subs... 203 6e-51 tr|A6N1T4|A6N1T4_ORYSI Cbs domain protein (Fragment) OS=Oryza sa... 174 5e-42 tr|A6N1B9|A6N1B9_ORYSI Cbs domain protein (Fragment) OS=Oryza sa... 171 4e-41 tr|Q5GA18|Q5GA18_MAIZE Putative uncharacterized protein adh1F OS... 164 5e-39 tr|A7NTB2|A7NTB2_VITVI Chromosome chr18 scaffold_1, whole genome... 158 3e-37 tr|B6VER4|B6VER4_9CONI Putative CBS domain-containing protein (F... 142 1e-32 tr|A9S8Y0|A9S8Y0_PHYPA Predicted protein OS=Physcomitrella paten... 140 6e-32 tr|B3H6Z2|B3H6Z2_ARATH Uncharacterized protein At1g47271.1 OS=Ar... 140 8e-32 tr|Q5VM86|Q5VM86_ORYSJ CBS domain protein-like (Putative unchara... 131 4e-29 tr|A2WSZ0|A2WSZ0_ORYSI Putative uncharacterized protein OS=Oryza... 130 5e-29 tr|Q66NC7|Q66NC7_CITLI Putative uncharacterized protein (Fragmen... 122 2e-26 tr|Q8W137|Q8W137_NARPS Putative uncharacterized protein (Fragmen... 113 8e-24 tr|Q75K17|Q75K17_DICDI Putative uncharacterized protein OS=Dicty... 97 1e-18 tr|Q0B847|Q0B847_BURCM Putative signal-transduction protein with... 92 2e-17 tr|B1K9R2|B1K9R2_BURCC Putative signal-transduction protein with... 92 2e-17 tr|B1TE84|B1TE84_9BURK Putative signal-transduction protein with... 92 3e-17 tr|Q398H1|Q398H1_BURS3 Putative signal-transduction protein with... 91 4e-17 tr|Q1BPC8|Q1BPC8_BURCA Putative signal-transduction protein with... 91 5e-17
>tr|A0T1V6|A0T1V6_SOLSC CBS domain-containing protein OS=Solenostemon scutellarioides PE=2 SV=1 Length = 202
Score = 220 bits (560), Expect = 6e-56 Identities = 113/146 (77%), Positives = 128/146 (87%), Gaps = 2/146 (1%) Frame = +2
Query: 182 LQHVP--PSSACALAFQRNESGKADPLEEHGFESTTISDILKGKGEKADGSWLFCKTDDT 355 LQHV P + AL F R+ES A +EEHGFESTTISD+L KG+ ADGSWL+C TDD+ Sbjct: 17 LQHVRVVPPAMRALMFPRHESTSAARMEEHGFESTTISDVLTAKGKGADGSWLWCTTDDS 76
Query: 356 VYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKIIVQGRSSKTTKVGDIMTEEN 535 VYDAVKSMTQHNVGAL+VVKP ++SIAGI+TERDYLRKIIVQGRSSK+TKVGDIMTEEN Sbjct: 77 VYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 136
Query: 536 KLITVTPETRVLQAMQLMTDNRIRHI 613 KLITVTP+T+VL+AMQLMTDNRIRHI Sbjct: 137 KLITVTPDTKVLKAMQLMTDNRIRHI 162
>tr|A9NPZ1|A9NPZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 205
Score = 218 bits (556), Expect = 2e-55 Identities = 116/160 (72%), Positives = 131/160 (81%), Gaps = 2/160 (1%) Frame = +2
Query: 140 RTMPVKWKVLVASSLQH--VPPSSACALAFQRNESGKADPLEEHGFESTTISDILKGKGE 313 R++ + + S LQH V S + R+ES LEEHGFESTTI+DILKGKG+ Sbjct: 6 RSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEEHGFESTTIADILKGKGK 65
Query: 314 KADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKIIVQGRS 493 ADGSWL+C TDDTVYDAVKSMTQHNVGALLVVKP ++SIAGI+TERDYLRKIIVQGRS Sbjct: 66 SADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRS 125
Query: 494 SKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 SKTTKVGDIMTEENKLITVT +T+VL+AMQLMTDNRIRHI Sbjct: 126 SKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHI 165
>tr|B7FJN7|B7FJN7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 205
Score = 217 bits (552), Expect = 5e-55 Identities = 109/133 (81%), Positives = 122/133 (91%) Frame = +2
Query: 215 LAFQRNESGKADPLEEHGFESTTISDILKGKGEKADGSWLFCKTDDTVYDAVKSMTQHNV 394 +AF R ES +EEHGFESTTISDILKGKG+ ADGSWL+C TDDTVYDAVKSMTQ+NV Sbjct: 33 VAFSRFESATPARIEEHGFESTTISDILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNV 92
Query: 395 GALLVVKPTGKESIAGIVTERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVTPETRVLQ 574 GAL+VVKP ++SIAGI+TERDYLRKIIVQGRSSK+TKVGDIMTEENKLITVTP+T+VL+ Sbjct: 93 GALVVVKPGEEKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLR 152
Query: 575 AMQLMTDNRIRHI 613 AMQLMTDNRIRHI Sbjct: 153 AMQLMTDNRIRHI 165
>tr|Q676Z5|Q676Z5_HYAOR CBS1 (Fragment) OS=Hyacinthus orientalis PE=2 SV=1 Length = 203
Score = 216 bits (550), Expect = 8e-55 Identities = 112/152 (73%), Positives = 128/152 (84%), Gaps = 2/152 (1%) Frame = +2
Query: 164 VLVASSLQHVPPSSAC--ALAFQRNESGKADPLEEHGFESTTISDILKGKGEKADGSWLF 337 VL + LQHV + + F R+ES + LEEHGFESTT+SD+LK KG+ ADGSWL+ Sbjct: 12 VLRRAVLQHVRVINPAFRPVIFSRSESVSSARLEEHGFESTTVSDVLKSKGKSADGSWLW 71
Query: 338 CKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKIIVQGRSSKTTKVGD 517 C TDD+VYDAVKSMTQHNVGAL+VVKP ++ IAGI+TERDYLRKIIVQGRSSK+TKVGD Sbjct: 72 CTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTKVGD 131
Query: 518 IMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 IMTEENKLITVTP T+VLQAMQLMTDNRIRHI Sbjct: 132 IMTEENKLITVTPGTKVLQAMQLMTDNRIRHI 163
>tr|A9NN81|A9NN81_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 205
Score = 215 bits (547), Expect = 2e-54 Identities = 115/160 (71%), Positives = 130/160 (81%), Gaps = 2/160 (1%) Frame = +2
Query: 140 RTMPVKWKVLVASSLQH--VPPSSACALAFQRNESGKADPLEEHGFESTTISDILKGKGE 313 R++ + + S LQH V S + R+ES LEE GFESTTI+DILKGKG+ Sbjct: 6 RSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADILKGKGK 65
Query: 314 KADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKIIVQGRS 493 ADGSWL+C TDDTVYDAVKSMTQHNVGALLVVKP ++SIAGI+TERDYLRKIIVQGRS Sbjct: 66 SADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRS 125
Query: 494 SKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 SKTTKVGDIMTEENKLITVT +T+VL+AMQLMTDNRIRHI Sbjct: 126 SKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHI 165
>tr|A7NXX2|A7NXX2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023898001 PE=4 SV=1 Length = 205
Score = 210 bits (535), Expect = 5e-53 Identities = 103/134 (76%), Positives = 121/134 (90%) Frame = +2
Query: 212 ALAFQRNESGKADPLEEHGFESTTISDILKGKGEKADGSWLFCKTDDTVYDAVKSMTQHN 391 ++ F R +S + +EEHGFESTTI+D+LKGKG+ ADGSWL+C TDD+VYDAVKSMT HN Sbjct: 32 SVVFSRLQSVTSARMEEHGFESTTIADVLKGKGKSADGSWLWCTTDDSVYDAVKSMTHHN 91
Query: 392 VGALLVVKPTGKESIAGIVTERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVTPETRVL 571 VGAL+VVKP ++SIAGI+TERDYLRKIIVQGRSSK+TKVGDIMTEENKLITV+P T+VL Sbjct: 92 VGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPNTKVL 151
Query: 572 QAMQLMTDNRIRHI 613 +AMQLMTDNRIRHI Sbjct: 152 RAMQLMTDNRIRHI 165
>tr|A9RR66|A9RR66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204938 PE=4 SV=1 Length = 208
Score = 207 bits (528), Expect = 3e-52 Identities = 113/169 (66%), Positives = 132/169 (78%), Gaps = 6/169 (3%) Frame = +2
Query: 125 MLRFARTMPVKWKVLVASSLQHVPPSSACALAF---QRNESGKA---DPLEEHGFESTTI 286 M +R + + VL LQHV A +F R E+G+A + LEEHGFESTTI Sbjct: 1 MYGLSRLVQGQRSVLSRCVLQHVRVGGG-AFSFGSQTRKETGQATTKESLEEHGFESTTI 59
Query: 287 SDILKGKGEKADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYL 466 +DILK KG++ADGSWL+C DDTVYDAVKSMT HNVGALLVVK ++ +AGI+TERDYL Sbjct: 60 ADILKEKGQQADGSWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYL 119
Query: 467 RKIIVQGRSSKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 RKIIVQGRSSKTTKVGDIMTEENKLITV P+T+VL+AM+LMTDNRIRHI Sbjct: 120 RKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHI 168
>tr|B4G1D2|B4G1D2_MAIZE CBS domain protein OS=Zea mays PE=2 SV=1 Length = 205
Score = 206 bits (524), Expect = 9e-52 Identities = 107/165 (64%), Positives = 129/165 (78%), Gaps = 2/165 (1%) Frame = +2
Query: 125 MLRFARTMPVKWKVLVASSLQHV--PPSSACALAFQRNESGKADPLEEHGFESTTISDIL 298 M R + + VL + LQH+ P + AF R S + LE+ GFE+ T++D+L Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 299 KGKGEKADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKII 478 K KG+ ADGSWL+C T+D+VYDAVKSMTQHNVGAL+VVKP +SIAGIVTERDYLRKII Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKII 120
Query: 479 VQGRSSKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 VQGRSSK+TKVGDIMTEENKLITV P+T+VLQAMQLMT+NR+RHI Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTENRVRHI 165
>tr|Q10D87|Q10D87_ORYSJ CBS domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g52690 PE=4 SV=1 Length = 230
Score = 205 bits (522), Expect = 1e-51 Identities = 107/166 (64%), Positives = 130/166 (78%), Gaps = 2/166 (1%) Frame = +2
Query: 122 KMLRFARTMPVKWKVLVASSLQHV--PPSSACALAFQRNESGKADPLEEHGFESTTISDI 295 KM R + + +L ++ L+H+ P S + R+ S + +EE GFE+ T++DI Sbjct: 25 KMQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADI 84
Query: 296 LKGKGEKADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKI 475 LK KG+ ADGSWL+C TDD+VYDAVKSMTQHNVGAL+VVKP +SIAGIVTERDYLRKI Sbjct: 85 LKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKI 144
Query: 476 IVQGRSSKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 IVQGRSSK+TKVGDIMTEEN+LITV P+TRVLQAMQLMT+ RIRHI Sbjct: 145 IVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHI 190
>tr|A3AMH0|A3AMH0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011992 PE=4 SV=1 Length = 233
Score = 205 bits (522), Expect = 1e-51 Identities = 107/166 (64%), Positives = 130/166 (78%), Gaps = 2/166 (1%) Frame = +2
Query: 122 KMLRFARTMPVKWKVLVASSLQHV--PPSSACALAFQRNESGKADPLEEHGFESTTISDI 295 KM R + + +L ++ L+H+ P S + R+ S + +EE GFE+ T++DI Sbjct: 28 KMQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADI 87
Query: 296 LKGKGEKADGSWLFCKTDDTVYDAVKSMTQHNVGALLVVKPTGKESIAGIVTERDYLRKI 475 LK KG+ ADGSWL+C TDD+VYDAVKSMTQHNVGAL+VVKP +SIAGIVTERDYLRKI Sbjct: 88 LKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKI 147
Query: 476 IVQGRSSKTTKVGDIMTEENKLITVTPETRVLQAMQLMTDNRIRHI 613 IVQGRSSK+TKVGDIMTEEN+LITV P+TRVLQAMQLMT+ RIRHI Sbjct: 148 IVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHI 193
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