DK963465 |
Clone id |
TST39A01NGRL0016_J20 |
Library |
TST39 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_J20. 5' end sequence. |
Accession |
DK963465 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL112Contig1 |
Sequence |
CGCTTGTGGGTCGCCCGGACGGTCATGGGTCTGCCCAGTCTGCAAGGTTTCTGGGTTGCA GAGAGCTCCATTTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACGTCCATAACCACAACA AAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGATATACAGCTGTATTCCCGAGAA TCTATGTGCGAGATCCACACAAAGTTTTAGGGGTTACTCGGGATGCATCCGAGGAAGAGA TTCAATCAGCTCGCAACTTTCTTGCTGAACAATATGCACATCATGAACGAAGTAGGGAAG CTGTTGAGGCAGCTCATGACAAAATCATCATGGAAAGCTTCTGAGCAAGGAAAAAATCAA AAATCAATCTTAAGAGCAACCTTAAAAAGAAAGTTGAAGAATCACCTCCGTGGGTGAAAA GAATTCTGAATATTTTTGAAGTTCCACCTTCTCAAATTATACTACAGAGGGCGGCCTTTT TTGGACTTATGGGAGTGTGGAGTGTGATGAATCCAGCCGAGGGGGGCCCCGCATTTCAGG TGGCTGTTTCTCTAGCAGGATGTGTGTATCTTCTTAATTATAGGCTCAAAAGCATTGGGC GGTCCTTCATGCTTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84BU3 |
Definition |
sp|Q84BU3|DNAJ_LACAC Chaperone protein dnaJ OS=Lactobacillus acidophilus |
Align length |
55 |
Score (bit) |
37.4 |
E-value |
0.062 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SGZ3 |
Definition |
tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
150 |
Score (bit) |
188.0 |
E-value |
2.0e-46 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963465|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_J20, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 188 2e-46 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 185 2e-45 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 184 3e-45 tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 182 2e-44 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 172 1e-41 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 165 2e-39 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 164 3e-39 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 157 6e-37 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 157 6e-37 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 154 3e-36 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 153 7e-36 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 152 2e-35 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 132 2e-29 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 128 3e-28 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 128 3e-28 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 120 8e-26 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 116 1e-24 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 114 3e-24 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 97 1e-18 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 96 2e-18 tr|Q60D81|Q60D81_BRAOL Putative Expressed protein OS=Brassica ol... 89 2e-16 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 84 9e-15 tr|Q0J5P0|Q0J5P0_ORYSJ Os08g0416900 protein (Fragment) OS=Oryza ... 82 2e-14 tr|Q6H5B0|Q6H5B0_ORYSJ Os09g0380200 protein OS=Oryza sativa subs... 80 7e-14 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 72 3e-11 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 69 3e-10 tr|Q7EYD0|Q7EYD0_ORYSJ Putative uncharacterized protein P0477F03... 68 5e-10 tr|A7PGK1|A7PGK1_VITVI Chromosome chr17 scaffold_16, whole genom... 66 2e-09 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 65 3e-09 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 65 4e-09
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 188 bits (477), Expect = 2e-46 Identities = 96/150 (64%), Positives = 112/150 (74%) Frame = +3
Query: 168 VFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESF*A 347 VFPR VRDP K+LG++ DASEEEI+ A+N+L EQY HE SREA+EAA++KIIM S+ Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 348 RXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGG 527 R VEESPPWV+ ILN+ EVP II QRAA F L+GVWSV NPAEGG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 528 PAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 PAFQVAVSLA CVY +N RLKS+GR+FMLG Sbjct: 125 PAFQVAVSLAACVYFINLRLKSLGRAFMLG 154
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 185 bits (469), Expect = 2e-45 Identities = 96/159 (60%), Positives = 114/159 (71%) Frame = +3
Query: 141 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHD 320 G ++ VFPR VRDP K+LGV+ DASEEEI+ A+N+L EQY HE SREA+EAA++ Sbjct: 55 GGAENLKPPVFPRRNVRDPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYE 114
Query: 321 KIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVW 500 KIIM SF R VEESPPWV+ ILN+ EVP I QRAA F L+GVW Sbjct: 115 KIIMHSFRVRKASKINLKTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVW 174
Query: 501 SVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 SV NPAEGGPAFQVAVSLA CVY +N RL+S+GR+F+LG Sbjct: 175 SVFNPAEGGPAFQVAVSLAACVYFINLRLQSLGRAFVLG 213
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 184 bits (468), Expect = 3e-45 Identities = 102/201 (50%), Positives = 133/201 (66%), Gaps = 13/201 (6%) Frame = +3
Query: 54 GCRELHFFWPGQKGSR----HVHNHNKIV-------CALGGS--SDEGYTAVFPRIYVRD 194 G R FF GQ+ R H + N+++ CA+ S G+ VFPR+ V D Sbjct: 32 GYRVQRFF--GQRIIRWQRCHAQSRNELLIRRLEPRCAMDASFGGRVGHPPVFPRVNVWD 89
Query: 195 PHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESF*ARXXXXXXXX 374 P+K LGV++ ASEEEIQ ARNFL EQYA HERS E++EAA +KIIM+SF R Sbjct: 90 PYKRLGVSKYASEEEIQEARNFLIEQYAGHERSVESIEAAFEKIIMKSFRERKRSKINLK 149
Query: 375 XXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGPAFQVAVSL 554 V+ESPPWV+ ++N EVPPS++I++RA F ++GVWSVMN +EGGPAFQVAVSL Sbjct: 150 SKLKKKVDESPPWVRSLINFLEVPPSEVIIRRACLFAVIGVWSVMNSSEGGPAFQVAVSL 209
Query: 555 AGCVYLLNYRLKSIGRSFMLG 617 C+Y LN ++KSIGR+ +LG Sbjct: 210 VTCIYFLNEKVKSIGRACVLG 230
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 182 bits (461), Expect = 2e-44 Identities = 93/162 (57%), Positives = 114/162 (70%) Frame = +3
Query: 132 ALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEA 311 A G S VFPR+ V+DP K LGV++DASEEE++ ARN+L EQY HE+SREA+E+ Sbjct: 4 AFGSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIES 63
Query: 312 AHDKIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLM 491 A+D IIM+SF R VEESPPWV+ I+N+ EVP I+ QRAA F L+ Sbjct: 64 AYDTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLL 123
Query: 492 GVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 GVWSV NPA GGPAFQVA+SLA CVY LN RLKS+ R+ +LG Sbjct: 124 GVWSVFNPANGGPAFQVAISLAACVYFLNDRLKSVARASVLG 165
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 172 bits (436), Expect = 1e-41 Identities = 88/183 (48%), Positives = 118/183 (64%), Gaps = 4/183 (2%) Frame = +3
Query: 81 PGQKGSRHVHNHNKIV----CALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQS 248 P ++ S+ + + ++ CA+ G FPRI V DP+K LG+ DASEEEI S Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 249 ARNFLAEQYAHHERSREAVEAAHDKIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRIL 428 +RNFL +QYA HERS E++EAA +KI+M SF R VEESPPWVK +L Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 429 NIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSF 608 N E+P +++I +R F MG WS++N AEGGPAFQVAVSLA C+Y LN + KS+ R+F Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAFQVAVSLAACIYFLNEKTKSLARAF 183
Query: 609 MLG 617 ++G Sbjct: 184 IIG 186
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 165 bits (417), Expect = 2e-39 Identities = 81/149 (54%), Positives = 104/149 (69%) Frame = +3
Query: 171 FPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESF*AR 350 F R+ V DP+K LG++RDASEEE+ S+RNFL QYA+HERS E++EAA +KI+M+SF R Sbjct: 54 FSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKSFINR 113
Query: 351 XXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPAEGGP 530 VEESPPWV+ +L+ E+PP IIL+R FG M WSVMN AE GP Sbjct: 114 KKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSAEAGP 173
Query: 531 AFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 AFQVA+S CVY LN + KS+GR+ ++G Sbjct: 174 AFQVAISFGACVYFLNDKTKSLGRAALIG 202
>tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor) (At5g23040/MYJ24_3) OS=Arabidopsis thaliana GN=AtCDF1 PE=2 SV=1 Length = 258
Score = 164 bits (416), Expect = 3e-39 Identities = 87/173 (50%), Positives = 109/173 (63%) Frame = +3
Query: 99 RHVHNHNKIVCALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYA 278 R+V K V SS G FPR V DP+K LGV+ ASEEEI ++RNFL +QYA Sbjct: 37 RNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYA 96
Query: 279 HHERSREAVEAAHDKIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQI 458 HERS E++E A +K++M SF R VEESPPW+K +L+ E+PP Sbjct: 97 GHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDT 156
Query: 459 ILQRAAFFGLMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 I +R F MG WS+MN AEGGPAFQVAVSLA CVY LN + KS+GR+ ++G Sbjct: 157 IFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLIG 209
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 157 bits (396), Expect = 6e-37 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 4/164 (2%) Frame = +3
Query: 138 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 305 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 306 EAAHDKIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 485 E A++KIIM+S+ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 486 LMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 + WS+ AE GPAFQ+A+SL C+Y LN ++K++ R+ G Sbjct: 177 FIAGWSIATSAENGPAFQLAISLFSCIYFLNDKMKNLMRASTTG 220
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 157 bits (396), Expect = 6e-37 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 4/164 (2%) Frame = +3
Query: 138 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAV 305 G D G++ VFPR +RDP+K+LGV RDA+EEEI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 306 EAAHDKIIMESF*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 485 E A++KIIM+S+ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 486 LMGVWSVMNPAEGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 + WS+ AE GPAFQ+A+SL C+Y LN ++K++ R+ G Sbjct: 177 FIAGWSIATSAENGPAFQLAISLFSCIYFLNDKMKNLMRASTTG 220
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 154 bits (390), Expect = 3e-36 Identities = 77/153 (50%), Positives = 100/153 (65%) Frame = +3
Query: 159 YTAVFPRIYVRDPHKVLGVTRDASEEEIQSARNFLAEQYAHHERSREAVEAAHDKIIMES 338 + VFPR +RDP+K+LGV RDASEEEI+ ARNFL +QYA HE S EA+E A++KIIM+S Sbjct: 69 HVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKIIMKS 128
Query: 339 F*ARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWSVMNPA 518 + R VEESP WVK +L FEVP II +R FF + WS+ A Sbjct: 129 YQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIATSA 188
Query: 519 EGGPAFQVAVSLAGCVYLLNYRLKSIGRSFMLG 617 E GPAFQ+A+SL C+Y LN ++K++ R+ G Sbjct: 189 ENGPAFQLAISLFSCIYFLNEKMKNLLRASTTG 221
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