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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963490
Clone id TST39A01NGRL0016_K22
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_K22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AAAGTAGGATCCTCGGAGATTGTGAGTGCGGAGAGAGAGGGAAGGCAGGCATGGCAACGA
TGACCTCTGCGTCTGCCATCAGCAGCTCCACATTCGCTGGGCAGACTGCGTTGAAGTCAC
AGAGCGAGCTGTCCAAGAGGGTTGGCAATGTGGATGCTCGCGTGACAATGAGGAGGACAG
TGAAGAGCACCCCAGAGAGCATCTGGTATGGCCCCGACCGCCCCAAGTACTTGGGCCCCT
TCTCTGAGGCTACCCCATCCTACCTGACCGGCGAGTTTCCGGGTGACTACGGCTGGGACA
CGGCCGGTTTGTCTGCAGACCCAGAGACATTCTCCAAGAACAGGGAGCTCGAGGTGATTC
ACGCGAGATGGGCAATGCTCGGCGCCCTGGGGTGTGTGACCCCCGAGTTGCTAGCCAAGA
ACGGGGTGAAATTCGGAGAGGCAGTGTGGTTCAAGGCCGGCTCCCAGATCTTCGCCGACG
GCGGTCTTGACTACCTGGGCAACCCCAGCCTTGTGCACGCTCAGAGCATTCTGGCCATCT
GGGCCTGCCAAGTGGTTCTCATGGGTGCCGTTGAAGGCTACAGAGTGGGCGGCGGCCCTC
TTGGAGAGGGCCTAGACCCTGTCTACC
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 175
Score (bit) 324.0
E-value 3.0e-88
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963490|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_K22, 5'
         (627 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   324   3e-88
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   314   3e-85
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   313   6e-85
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   312   8e-85
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   311   1e-84
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   311   2e-84
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   310   4e-84
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   310   5e-84
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   310   5e-84
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   307   3e-83
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   296   8e-80
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   296   8e-80
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   292   1e-78
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   284   2e-76
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   283   7e-76
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   283   7e-76
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   281   1e-75
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   281   3e-75
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   281   3e-75
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   280   3e-75
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   280   4e-75
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   280   6e-75
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   279   7e-75
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   278   1e-74
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   278   1e-74
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   278   2e-74
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   278   2e-74
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   278   2e-74
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   278   2e-74
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   276   6e-74

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  324 bits (830), Expect = 3e-88
 Identities = 153/175 (87%), Positives = 162/175 (92%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           QT LK Q+EL ++VG    RV+MRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           SQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +Y
Sbjct: 134 SQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLY 188


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  314 bits (804), Expect = 3e-85
 Identities = 148/176 (84%), Positives = 161/176 (91%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALK  +EL  ++G V   RV+MRRTVKS P SIWYGPDRPKYLGPFS+  PSYLTGEF
Sbjct: 14  QTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDP+Y
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIY 189


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  313 bits (801), Expect = 6e-85
 Identities = 147/176 (83%), Positives = 161/176 (91%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           Q   KSQ+E  ++VGN  + R+TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +Y
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIY 189


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  312 bits (800), Expect = 8e-85
 Identities = 145/176 (82%), Positives = 163/176 (92%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALKSQ+EL +++G+ +  R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD +Y
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIY 189


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  311 bits (798), Expect = 1e-84
 Identities = 144/175 (82%), Positives = 162/175 (92%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           QTALK + EL ++VG  D R +MRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+Y
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLY 188


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  311 bits (797), Expect = 2e-84
 Identities = 145/175 (82%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +3

Query: 102 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTA +SADPETF+KNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWFKA
Sbjct: 75  PGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKA 134

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPV 623
           G+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+
Sbjct: 135 GAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPL 189


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  310 bits (794), Expect = 4e-84
 Identities = 146/176 (82%), Positives = 161/176 (91%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALKSQ+EL +++G+    R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +Y
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIY 189


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  310 bits (793), Expect = 5e-84
 Identities = 144/169 (85%), Positives = 158/169 (93%)
 Frame = +3

Query: 120 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 299
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 300 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 479
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 480 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VY
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVY 187


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  310 bits (793), Expect = 5e-84
 Identities = 144/169 (85%), Positives = 158/169 (93%)
 Frame = +3

Query: 120 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 299
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 300 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 479
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 480 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VY
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVY 187


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  307 bits (787), Expect = 3e-83
 Identities = 146/176 (82%), Positives = 158/176 (89%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           +T L+  +E  ++ GN   AR TMRRTVKS PESIWYGPDRPKYLGPFSE  PSYLTGEF
Sbjct: 14  KTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+Y
Sbjct: 134 GSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLY 189
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 176
Score (bit) 322.0
E-value 9.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963490|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_K22, 5'
         (627 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   322   9e-87
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   321   3e-86
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   320   6e-86
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   319   7e-86
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   318   1e-85
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   317   3e-85
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   317   4e-85
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   317   5e-85
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   316   8e-85
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   315   1e-84
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   315   1e-84
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   314   2e-84
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   314   2e-84
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   314   2e-84
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   314   2e-84
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   314   3e-84
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   314   3e-84
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   314   3e-84
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   314   3e-84
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   314   3e-84
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   313   4e-84
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   313   5e-84
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   313   7e-84
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   311   2e-83
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   311   2e-83
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   310   3e-83
tr|B0L0Y2|B0L0Y2_9POAL Chloroplast chlorophyll a/b binding prote...   310   5e-83
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   309   1e-82
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   308   1e-82
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   308   1e-82

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  322 bits (826), Expect = 9e-87
 Identities = 150/176 (85%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKA 134

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           G+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+Y
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLY 190


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  321 bits (822), Expect = 3e-86
 Identities = 148/169 (87%), Positives = 161/169 (95%)
 Frame = +3

Query: 120 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 299
           Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 2   QNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 61

Query: 300 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 479
           TAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++
Sbjct: 62  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSE 121

Query: 480 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+Y
Sbjct: 122 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLY 170


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  320 bits (819), Expect = 6e-86
 Identities = 147/175 (84%), Positives = 163/175 (93%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           +TALK Q+EL K+VG    R++M RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  RTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +Y
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIY 188


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  319 bits (818), Expect = 7e-86
 Identities = 150/176 (85%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALK  +EL ++VG +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           G+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +Y
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIY 189


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  318 bits (816), Expect = 1e-85
 Identities = 149/175 (85%), Positives = 161/175 (92%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           QTALK Q+EL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +Y
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIY 188


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
           type I OS=Lilium longiflorum PE=2 SV=1
          Length = 264

 Score =  317 bits (813), Expect = 3e-85
 Identities = 148/175 (84%), Positives = 164/175 (93%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           QTALK++ EL ++VG V  RV+MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELL+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+Y
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLY 188


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  317 bits (812), Expect = 4e-85
 Identities = 146/175 (83%), Positives = 161/175 (92%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 281
           QT LK Q+EL ++VG    R +MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 282 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 461
           GDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 462 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           SQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +Y
Sbjct: 134 SQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIY 188


>tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding
           protein OS=Prunus persica GN=Lhcb-Pp2 PE=2 SV=1
          Length = 265

 Score =  317 bits (811), Expect = 5e-85
 Identities = 149/176 (84%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALK  +EL +++G +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQSNELIRKIGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KN ELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNGELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           GSQIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+Y
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLY 189


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  316 bits (809), Expect = 8e-85
 Identities = 148/176 (84%), Positives = 165/176 (93%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QTALK Q+EL +++G++   R+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVWFKA 133

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           G+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +Y
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIY 189


>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  315 bits (808), Expect = 1e-84
 Identities = 149/176 (84%), Positives = 163/176 (92%), Gaps = 1/176 (0%)
 Frame = +3

Query: 102 QTALKS-QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 278
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEF 74

Query: 279 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 458
           PGDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELLAK GVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKA 134

Query: 459 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVY 626
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+Y
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLY 190