DK963494 |
Clone id |
TST39A01NGRL0016_L02 |
Library |
TST39 |
Length |
416 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_L02. 5' end sequence. |
Accession |
DK963494 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL963Contig1 |
Sequence |
GTGTATAATTATCTGCAGCCCTATCAAGCACCGGCCAGACTAGGCCATGGGAAAGGGCGG TGCGCAGGGGAGTGCTGTTGCAACTGATGGTACACCTGATAATTTGGCTGCATGGCTCAT GGAGGCCAATAAGCTTGAAATTCGGCCCTTTCACCTGCCACCTCTTGGTCCCAAAGATGC AAAAATCATGATGAAGGCGGTTGGCATTTGTGGCACCGATGTTCATTACTTTCACCATAT GCTACTAGCACATTTTGTTGTGAGAGAACCGATGGTGATAGGCCATGAATGTGCTGGAAT TGTTGAACAAATTGGCAGCGAAGTCAAGCACCTAGCTGTGGGTGACGAGGTGGCTCTTGA ACCTGGAGTTTCATGTGCCCATTGTGCACATTGCACGGAAGGGCATTACAACCTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q00796 |
Definition |
sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens |
Align length |
113 |
Score (bit) |
103.0 |
E-value |
3.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZBH2 |
Definition |
tr|Q6ZBH2|Q6ZBH2_ORYSJ Os08g0545200 protein OS=Oryza sativa subsp. japonica |
Align length |
127 |
Score (bit) |
173.0 |
E-value |
4.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963494|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_L02, 5' (416 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZBH2|Q6ZBH2_ORYSJ Os08g0545200 protein OS=Oryza sativa subs... 173 4e-42 tr|B8B9C4|B8B9C4_ORYSI Putative uncharacterized protein OS=Oryza... 173 4e-42 tr|A3BVF1|A3BVF1_ORYSJ Putative uncharacterized protein OS=Oryza... 173 4e-42 tr|B8B9C5|B8B9C5_ORYSI Putative uncharacterized protein OS=Oryza... 171 2e-41 tr|Q0QWI2|Q0QWI2_MAIZE Sorbitol dehydrogenase OS=Zea mays PE=3 SV=1 168 1e-40 tr|B6TEC1|B6TEC1_MAIZE Sorbitol dehydrogenase OS=Zea mays PE=2 SV=1 168 1e-40 tr|Q6EM45|Q6EM45_MALDO NAD-dependent sorbitol dehydrogenase 2 OS... 160 4e-38 tr|Q67XB8|Q67XB8_ARATH Sorbitol dehydrogenase-like protein OS=Ar... 160 4e-38 tr|Q8W2C8|Q8W2C8_MALDO Sorbitol dehydrogenase OS=Malus domestica... 159 7e-38 tr|Q9FJ95|Q9FJ95_ARATH Sorbitol dehydrogenase-like protein OS=Ar... 158 1e-37 tr|Q8LEV5|Q8LEV5_ARATH Sorbitol dehydrogenase-like protein OS=Ar... 158 1e-37 tr|Q8W2C9|Q8W2C9_MALDO Sorbitol dehydrogenase OS=Malus domestica... 157 3e-37 tr|Q8L5I0|Q8L5I0_MALDO Sorbitol dehydrogenase OS=Malus domestica... 157 3e-37 tr|Q6EM42|Q6EM42_MALDO NAD-dependent sorbitol dehydrogenase 9 OS... 156 4e-37 tr|Q5I6M3|Q5I6M3_MALDO Sorbitol dehydrogenase OS=Malus domestica... 156 4e-37 tr|A7BGM9|A7BGM9_FRAAN NAD-dependent sorbitol dehydrogenase OS=F... 156 4e-37 tr|Q1PSI9|Q1PSI9_VITVI L-idonate dehydrogenase OS=Vitis vinifera... 156 6e-37 tr|A7R1S6|A7R1S6_VITVI Chromosome undetermined scaffold_376, who... 155 9e-37 tr|Q93X81|Q93X81_9ROSA Sorbitol dehydrogenase OS=Prunus cerasus ... 155 1e-36 tr|Q9ZR22|Q9ZR22_MALDO NAD-dependent sorbitol dehydrogenase OS=M... 154 3e-36 tr|Q9MBD7|Q9MBD7_PRUPE NAD-dependent sorbitol dehydrogenase OS=P... 154 3e-36 tr|Q3C2L6|Q3C2L6_SOLLC Sorbitol related enzyme OS=Solanum lycope... 154 3e-36 tr|A7R1S9|A7R1S9_VITVI Chromosome undetermined scaffold_376, who... 153 4e-36 tr|Q9MAW7|Q9MAW7_9ROSA NAD-dependent sorbitol dehydrogenase OS=E... 151 1e-35 tr|Q8W2D0|Q8W2D0_MALDO Sorbitol dehydrogenase OS=Malus domestica... 151 1e-35 tr|Q6EM46|Q6EM46_MALDO NAD-dependent sorbitol dehydrogenase 1 OS... 151 1e-35 tr|Q5I6M4|Q5I6M4_MALDO Sorbitol dehydrogenase OS=Malus domestica... 151 1e-35 tr|B7FI45|B7FI45_MEDTR Putative uncharacterized protein OS=Medic... 150 2e-35 tr|B8Y4R2|B8Y4R2_9ROSA NAD-dependent sorbitol dehydrogenase OS=P... 149 7e-35 tr|A5ANX2|A5ANX2_VITVI Putative uncharacterized protein OS=Vitis... 148 2e-34
>tr|Q6ZBH2|Q6ZBH2_ORYSJ Os08g0545200 protein OS=Oryza sativa subsp. japonica GN=P0623F08.37 PE=2 SV=1 Length = 369
Score = 173 bits (438), Expect = 4e-42 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 4/127 (3%) Frame = +2
Query: 47 MGKGG----AQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICG 214 MGKGG A +AVA G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG Sbjct: 1 MGKGGKGAEAAAAAVAGAGEEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICG 60
Query: 215 TDVHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHC 394 +DVHY M +AHFVV+EPMVIGHECAG++E++GS V HLAVGD VALEPG+SC C HC Sbjct: 61 SDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHC 120
Query: 395 TEGHYNL 415 G YNL Sbjct: 121 KGGRYNL 127
>tr|B8B9C4|B8B9C4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30128 PE=4 SV=1 Length = 361
Score = 173 bits (438), Expect = 4e-42 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 4/127 (3%) Frame = +2
Query: 47 MGKGG----AQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICG 214 MGKGG A +AVA G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG Sbjct: 1 MGKGGKGAEAAAAAVAGAGEEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICG 60
Query: 215 TDVHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHC 394 +DVHY M +AHFVV+EPMVIGHECAG++E++GS V HLAVGD VALEPG+SC C HC Sbjct: 61 SDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHC 120
Query: 395 TEGHYNL 415 G YNL Sbjct: 121 KGGRYNL 127
>tr|A3BVF1|A3BVF1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027023 PE=3 SV=1 Length = 382
Score = 173 bits (438), Expect = 4e-42 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 4/127 (3%) Frame = +2
Query: 47 MGKGG----AQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICG 214 MGKGG A +AVA G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG Sbjct: 1 MGKGGKGAEAAAAAVAGAGEEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICG 60
Query: 215 TDVHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHC 394 +DVHY M +AHFVV+EPMVIGHECAG++E++GS V HLAVGD VALEPG+SC C HC Sbjct: 61 SDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHC 120
Query: 395 TEGHYNL 415 G YNL Sbjct: 121 KGGRYNL 127
>tr|B8B9C5|B8B9C5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30129 PE=4 SV=1 Length = 368
Score = 171 bits (433), Expect = 2e-41 Identities = 76/122 (62%), Positives = 92/122 (75%) Frame = +2
Query: 50 GKGGAQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGTDVHY 229 GKG +A A G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG+DVHY Sbjct: 5 GKGAEAAAAAAGAGEEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHY 64
Query: 230 FHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCTEGHY 409 M +AHFVV+EPMVIGHECAG++E++GS V HLAVGD VALEPG+SC C HC G Y Sbjct: 65 LREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHCKGGRY 124
Query: 410 NL 415 NL Sbjct: 125 NL 126
>tr|Q0QWI2|Q0QWI2_MAIZE Sorbitol dehydrogenase OS=Zea mays PE=3 SV=1 Length = 366
Score = 168 bits (426), Expect = 1e-40 Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 2/125 (1%) Frame = +2
Query: 47 MGKGGAQGSAVATDG--TPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGTD 220 MGKG AQGS A G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG+D Sbjct: 1 MGKG-AQGSDAAAAGGEVEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSD 59
Query: 221 VHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCTE 400 VHY M +AHFVV+EPMVIGHECAG+VE++G+ V HL+VGD VALEPGVSC C HC Sbjct: 60 VHYLREMRIAHFVVKEPMVIGHECAGVVEEVGAGVMHLSVGDRVALEPGVSCWRCRHCKG 119
Query: 401 GHYNL 415 G YNL Sbjct: 120 GRYNL 124
>tr|B6TEC1|B6TEC1_MAIZE Sorbitol dehydrogenase OS=Zea mays PE=2 SV=1 Length = 365
Score = 168 bits (426), Expect = 1e-40 Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 2/125 (1%) Frame = +2
Query: 47 MGKGGAQGSAVATDG--TPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGTD 220 MGKG AQGS A G +N+AAWL+ N L+I PF LPP+GP D ++ MKAVGICG+D Sbjct: 1 MGKG-AQGSDAAAAGGEVEENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSD 59
Query: 221 VHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCTE 400 VHY M +AHFVV+EPMVIGHECAG+VE++G+ V HL+VGD VALEPGVSC C HC Sbjct: 60 VHYLREMRIAHFVVKEPMVIGHECAGVVEEVGAGVTHLSVGDRVALEPGVSCWRCRHCKG 119
Query: 401 GHYNL 415 G YNL Sbjct: 120 GRYNL 124
>tr|Q6EM45|Q6EM45_MALDO NAD-dependent sorbitol dehydrogenase 2 OS=Malus domestica PE=2 SV=1 Length = 368
Score = 160 bits (404), Expect = 4e-38 Identities = 72/126 (57%), Positives = 91/126 (72%), Gaps = 3/126 (2%) Frame = +2
Query: 47 MGKGGAQGSAVATDGTP---DNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGT 217 MGKGG + V D P +N+AAWL++ N ++I PF LP +GP D +I +KAVGICG+ Sbjct: 1 MGKGGQSCNGVVRDAKPVEQENMAAWLVDVNTIKILPFKLPAIGPNDVRIRIKAVGICGS 60
Query: 218 DVHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCT 397 D+HY M F V++PMVIGHECAGIV+++GSEVKHL GD VA+EPG+SCAHC C Sbjct: 61 DIHYLKTMKCGDFQVKDPMVIGHECAGIVDKVGSEVKHLVPGDRVAVEPGISCAHCQQCK 120
Query: 398 EGHYNL 415 G YNL Sbjct: 121 GGRYNL 126
>tr|Q67XB8|Q67XB8_ARATH Sorbitol dehydrogenase-like protein OS=Arabidopsis thaliana GN=At5g51970 PE=2 SV=1 Length = 364
Score = 160 bits (404), Expect = 4e-38 Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 1/124 (0%) Frame = +2
Query: 47 MGKGG-AQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGTDV 223 MGKGG +QG + +N+AAWL+ N L+I+PF LP +GP D ++ MKAVGICG+DV Sbjct: 1 MGKGGMSQGEGSKVE--EENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDV 58
Query: 224 HYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCTEG 403 HY M+ A FVV+EPMVIGHECAGI+E++G EVKHL VGD VALEPG+SC C C EG Sbjct: 59 HYLKTMICADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREG 118
Query: 404 HYNL 415 YNL Sbjct: 119 RYNL 122
>tr|Q8W2C8|Q8W2C8_MALDO Sorbitol dehydrogenase OS=Malus domestica GN=SDH3 PE=2 SV=1 Length = 368
Score = 159 bits (402), Expect = 7e-38 Identities = 73/126 (57%), Positives = 92/126 (73%), Gaps = 3/126 (2%) Frame = +2
Query: 47 MGKGGAQGSAVATDGTP---DNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGT 217 MGKGG + + D P +N+AAWL++ N ++I PF LP +GP D +I +KAVGICG+ Sbjct: 1 MGKGGQSCNGMVRDVKPVEKENMAAWLVDVNTIKILPFKLPTIGPNDVQIRIKAVGICGS 60
Query: 218 DVHYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCT 397 DVHY M A F V+EPMVIGH+CAGIV+++GSEVKHL GD VA+EPG+SCAHC C Sbjct: 61 DVHYLKTMKCADFEVKEPMVIGHQCAGIVDKVGSEVKHLVPGDRVAVEPGISCAHCQQCK 120
Query: 398 EGHYNL 415 G YNL Sbjct: 121 GGRYNL 126
>tr|Q9FJ95|Q9FJ95_ARATH Sorbitol dehydrogenase-like protein OS=Arabidopsis thaliana GN=At5g51970 PE=2 SV=1 Length = 364
Score = 158 bits (400), Expect = 1e-37 Identities = 76/124 (61%), Positives = 92/124 (74%), Gaps = 1/124 (0%) Frame = +2
Query: 47 MGKGG-AQGSAVATDGTPDNLAAWLMEANKLEIRPFHLPPLGPKDAKIMMKAVGICGTDV 223 MGKGG +QG + +N+AAWL+ N L+I+PF LP +GP D ++ MKAVGICG+DV Sbjct: 1 MGKGGMSQGEGSKVE--EENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDV 58
Query: 224 HYFHHMLLAHFVVREPMVIGHECAGIVEQIGSEVKHLAVGDEVALEPGVSCAHCAHCTEG 403 HY M A FVV+EPMVIGHECAGI+E++G EVKHL VGD VALEPG+SC C C EG Sbjct: 59 HYLKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREG 118
Query: 404 HYNL 415 YNL Sbjct: 119 RYNL 122
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