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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963514
Clone id TST39A01NGRL0016_L22
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_L22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAACAACT
GCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCTCT
CGCAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCATCT
GGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTCCC
CCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGTCC
GCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGGCC
ATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAAGTTT
GGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCTTGATTAT
CTTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTGGCCATTTGGGCCTGCCAGGTC
ATCCTTATGGGCGCTGTTGAGGGGTACCGTGTTGCAGGTGGTCCCCTTGGTGAGGTTGAG
GACCC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 187
Score (bit) 356.0
E-value 6.0e-98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963514|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L22, 5'
         (605 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   356   6e-98
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   296   4e-80
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   296   7e-80
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   296   7e-80
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   293   4e-79
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   291   1e-78
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   291   2e-78
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   291   2e-78
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   291   2e-78
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   290   3e-78
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   290   3e-78
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   290   5e-78
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   290   5e-78
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   289   9e-78
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   288   2e-77
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   288   2e-77
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   288   2e-77
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   287   3e-77
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   287   3e-77
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   287   3e-77
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   287   3e-77
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   287   3e-77
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   286   6e-77
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   286   6e-77
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   286   7e-77
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   285   1e-76
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   285   1e-76
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   284   2e-76
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   284   2e-76
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   283   5e-76

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  356 bits (913), Expect = 6e-98
 Identities = 176/187 (94%), Positives = 183/187 (97%), Gaps = 1/187 (0%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 222
           MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1   MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 223 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 402
           PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA
Sbjct: 60  PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 403 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 582
           KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 583 PLGEVED 603
           PLGEVED
Sbjct: 180 PLGEVED 186


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  296 bits (759), Expect = 4e-80
 Identities = 145/180 (80%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
 Frame = +1

Query: 58  TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 234
           T+++  S F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS 
Sbjct: 3   TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 235 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV 414
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 415 KFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 594
           KFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GGPLGE
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  296 bits (757), Expect = 7e-80
 Identities = 147/189 (77%), Positives = 163/189 (86%), Gaps = 3/189 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 216
           MAA TA  S+++     +KPVNELSRKV G  EARV M      S+GS  IWYG+DRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 396
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 397 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 576
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 577 GGPLGEVED 603
           GGPLGEV D
Sbjct: 181 GGPLGEVTD 189



 Score = 31.2 bits (69), Expect = 4.3
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 229 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 408
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 409 G 411
           G
Sbjct: 240 G 240


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  296 bits (757), Expect = 7e-80
 Identities = 149/190 (78%), Positives = 158/190 (83%), Gaps = 4/190 (2%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 213
           MAATT SLSSS F+G   K V  L      G+ARV M       K+ SS S WYGSDR L
Sbjct: 1   MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 214 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 393
           YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 58  YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 394 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 573
           LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177

Query: 574 AGGPLGEVED 603
           AGGPLGE+ D
Sbjct: 178 AGGPLGEIVD 187


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  293 bits (751), Expect = 4e-79
 Identities = 146/191 (76%), Positives = 161/191 (84%), Gaps = 5/191 (2%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 210
           MA++T +LSS+ F+G+ +   + L      GEARV M      A   +SSGS WYG DR 
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 211 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 390
           LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 56  LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115

Query: 391 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 570
           ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175

Query: 571 VAGGPLGEVED 603
           VAGGPLGEV D
Sbjct: 176 VAGGPLGEVVD 186


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  291 bits (746), Expect = 1e-78
 Identities = 144/188 (76%), Positives = 157/188 (83%), Gaps = 2/188 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 219
           MA +T +LSSS F+G+ +K     S   G G   ++  A K   +SSGS WYG DR  YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 399
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 400 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 579
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 580 GPLGEVED 603
           GPLGEV D
Sbjct: 181 GPLGEVVD 188


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  291 bits (745), Expect = 2e-78
 Identities = 144/191 (75%), Positives = 161/191 (84%), Gaps = 5/191 (2%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 210
           MAA+T ++SS+  +G  +K        VG+ GE R+ M      PK ++SGS WYG DR 
Sbjct: 1   MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52

Query: 211 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 390
            YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 53  KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112

Query: 391 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 570
           ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR
Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172

Query: 571 VAGGPLGEVED 603
           +AGGPLGEV D
Sbjct: 173 IAGGPLGEVVD 183


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  291 bits (744), Expect = 2e-78
 Identities = 145/188 (77%), Positives = 156/188 (82%), Gaps = 2/188 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 219
           MAA T +LSSS F+G+ +K     S   G G+  ++    K    SSGS WYG DR  YL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 399
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 400 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 579
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 580 GPLGEVED 603
           GPLGEV D
Sbjct: 181 GPLGEVVD 188


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  291 bits (744), Expect = 2e-78
 Identities = 145/188 (77%), Positives = 157/188 (83%), Gaps = 2/188 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 219
           MAA+T +LSS  F+G+ +K     S   G G+  ++  A K    SSGS WYG DR  YL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 399
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 400 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 579
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 580 GPLGEVED 603
           GPLGEV D
Sbjct: 181 GPLGEVVD 188


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  290 bits (743), Expect = 3e-78
 Identities = 142/186 (76%), Positives = 153/186 (82%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA T +LSS  F+GQ +K     S   G G   ++    K + S S WYG DR  YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
           FSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 586 LGEVED 603
           LGEV D
Sbjct: 181 LGEVVD 186
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 188
Score (bit) 338.0
E-value 2.0e-91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963514|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L22, 5'
         (605 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   338   2e-91
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   309   7e-83
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   309   9e-83
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   306   6e-82
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   306   8e-82
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   305   1e-81
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   305   2e-81
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   305   2e-81
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   302   9e-81
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   302   9e-81
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   301   1e-80
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   301   3e-80
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   299   1e-79
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   298   2e-79
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   296   5e-79
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   295   1e-78
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   294   2e-78
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind...   294   3e-78
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   294   3e-78
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   293   7e-78
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   293   7e-78
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   293   7e-78
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   292   9e-78
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   292   9e-78
tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ...   292   9e-78
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   292   1e-77
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   292   1e-77
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   291   2e-77
tr|Q39141|Q39141_ARATH Photosystem II type I chlorophyll a /b bi...   291   2e-77
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   291   2e-77

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  338 bits (866), Expect = 2e-91
 Identities = 172/188 (91%), Positives = 174/188 (92%), Gaps = 7/188 (3%)
 Frame = +1

Query: 46  MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 204
           MAATT       A LSSSVFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+D
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 205 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 384
           R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 61  RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 385 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 564
           TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG
Sbjct: 121 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 180

Query: 565 YRVAGGPL 588
           YRVA  PL
Sbjct: 181 YRVAVVPL 188


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  309 bits (792), Expect = 7e-83
 Identities = 152/186 (81%), Positives = 163/186 (87%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA TA  S+++     LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 586 LGEVED 603
           LGEV D
Sbjct: 179 LGEVTD 184


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  309 bits (791), Expect = 9e-83
 Identities = 149/186 (80%), Positives = 165/186 (88%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA TA  S+++     LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
           FSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 61  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP
Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 586 LGEVED 603
           LGE+ D
Sbjct: 181 LGEITD 186


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  306 bits (784), Expect = 6e-82
 Identities = 150/188 (79%), Positives = 164/188 (87%), Gaps = 2/188 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 219
           MAA TA  S+++     LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 399
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 400 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 579
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 580 GPLGEVED 603
           GPLGEV D
Sbjct: 181 GPLGEVTD 188


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  306 bits (783), Expect = 8e-82
 Identities = 149/186 (80%), Positives = 164/186 (88%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA TA  S+++     LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGP
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 586 LGEVED 603
           LGEV D
Sbjct: 179 LGEVTD 184


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  305 bits (782), Expect = 1e-81
 Identities = 149/186 (80%), Positives = 161/186 (86%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA TA  S+++     LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 61  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180

Query: 586 LGEVED 603
           LG+V D
Sbjct: 181 LGDVTD 186


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  305 bits (780), Expect = 2e-81
 Identities = 149/189 (78%), Positives = 166/189 (87%), Gaps = 3/189 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 216
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 396
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 397 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 576
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 577 GGPLGEVED 603
           GGPLG+V D
Sbjct: 181 GGPLGDVTD 189


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  305 bits (780), Expect = 2e-81
 Identities = 149/189 (78%), Positives = 166/189 (87%), Gaps = 3/189 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 216
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 396
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 397 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 576
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 577 GGPLGEVED 603
           GGPLG+V D
Sbjct: 181 GGPLGDVTD 189


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  302 bits (774), Expect = 9e-81
 Identities = 151/186 (81%), Positives = 163/186 (87%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
           MAA TA+ S+++     LK +NELSRKVG  +ARV M   K SSS SIWYG+DRP YLGP
Sbjct: 1   MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 405
            SG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 406 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 585
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178

Query: 586 LGEVED 603
           LGEV D
Sbjct: 179 LGEVTD 184


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  302 bits (774), Expect = 9e-81
 Identities = 150/188 (79%), Positives = 164/188 (87%), Gaps = 2/188 (1%)
 Frame = +1

Query: 46  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 219
           MAA TA  S+++     LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 399
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 400 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 579
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180

Query: 580 GPLGEVED 603
           GPLG+V D
Sbjct: 181 GPLGDVTD 188