DK963516
Clone id TST39A01NGRL0016_L24
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_L24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTTTTTTTTTTTTTTTTTGAGAGAATCTTCCACTAGATAATGTAGCTCAAAAGCTTGTAC
AAAGCAGGACAGACAAAGAATCTTCCACTAGATAATGTAGCTCAAAAGCTCATACATCAA
AACAAATCCTCATACGTGCTGCTCTTGGTGGGTCTCGGTCCTTTTTGCTCTCCTCCTGCC
AGAGGATGAGGCGCGCGCCAGCAGGTGCTGTCCTTGCGAGAAGACGGCTGCACAACAGGT
TATGGAAGGTGATTGCATTCAAGGGGGTTGCTCTACAGGCTCAGGTGGCGAGGACGTGGC
AGCAAGAGCTTTTTCATGCGTTGTTCTGCTCGTTTAATGCCGCAAGCGGGCTTCTCAAGG
TCGTTGAAGGCGATCGTGCAGGCTGAGGTTATGAGCACTGATTGTGTTGCTCTTCGTGGT
TCAGTACACGTGCTGAATGGAGCACGAGACATGTAATTTCCATGTACTTATTG
■■Homology search results ■■ -
sp_hit_id Q6CXW0
Definition sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyveromyces lactis
Align length 51
Score (bit) 29.6
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963516|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L24, 5'
(455 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyvero... 30 6.4

>sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8
OS=Kluyveromyces lactis GN=DBP8 PE=3 SV=1
Length = 435

Score = 29.6 bits (65), Expect = 6.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2

Query: 119 CCSWWVSVLFALLLPEDEARASRCCPCEKTAAQQVMEG-DCIQGGCSTGSG 268
C W V L A+ + + A C P ++++G DCI GG +TGSG
Sbjct: 11 CSKWLVEALNAMKIVQPTAIQKACIP-------EILKGRDCI-GGANTGSG 53


tr_hit_id B0X366
Definition tr|B0X366|B0X366_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length 63
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963516|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L24, 5'
(455 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0X366|B0X366_CULQU Putative uncharacterized protein OS=Culex... 34 3.2
tr|A9SJ97|A9SJ97_PHYPA Histone-lysine N-methyltransferase (Fragm... 33 5.4
tr|Q8MRV5|Q8MRV5_DROME SD20094p OS=Drosophila melanogaster GN=CG... 33 5.4
tr|A8WHG2|A8WHG2_DROME IP15395p OS=Drosophila melanogaster GN=CG... 33 5.4
tr|A8JR82|A8JR82_DROME CG31158, isoform C OS=Drosophila melanoga... 33 5.4
tr|A8JR81|A8JR81_DROME CG31158, isoform D OS=Drosophila melanoga... 33 5.4
tr|B6HD01|B6HD01_PENCH Putative uncharacterized protein Pc19g000... 33 5.4

>tr|B0X366|B0X366_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ013658 PE=4 SV=1
Length = 608

Score = 34.3 bits (77), Expect = 3.2
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3

Query: 111 LIRAALGGSRSFLLSSCQRMRRAPAGAVLARRRLHNRLWKVIAFKGVALQAQVARTWQQE 290
++ A GGS L C+R RR P VLA R H L ++ A + L A++ + +
Sbjct: 48 VLEALTGGSNLGLFWFCERCRRHPERRVLAERNRHQELTELSAIR--VLAAKMVESVDEN 105

Query: 291 LFH 299
L H
Sbjct: 106 LNH 108


>tr|A9SJ97|A9SJ97_PHYPA Histone-lysine N-methyltransferase (Fragment)
OS=Physcomitrella patens subsp. patens GN=SDG1506 PE=4
SV=1
Length = 2933

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3

Query: 45 SRTDKESSTR*CSSKAHTSKQILIRAALGGSRSFLLSSCQRMRRAPAGAVLARRRLHNRL 224
SR S+ C S ++ K+++++ +GG S + + PAG +L R++ N
Sbjct: 1512 SRKHASPSSLECPSSSNMGKRLVMKRGIGGYYSSKETEHNEVEAEPAG-ILERKQRRNMK 1570

Query: 225 WKVIAFKG 248
WK++ G
Sbjct: 1571 WKLLELDG 1578


>tr|Q8MRV5|Q8MRV5_DROME SD20094p OS=Drosophila melanogaster
GN=CG6941 PE=1 SV=1
Length = 585

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1

Query: 28 LKSLYKAGQTKNLP--LDNVAQKLIHQNKSSYVLLLVGLGPFCSPP 159
LKSLY+A +TK L LD A L Q ++ L VGL PF PP
Sbjct: 265 LKSLYQAIKTKPLEWALDEEAGDLQQQRANNSALGNVGLNPFLDPP 310


>tr|A8WHG2|A8WHG2_DROME IP15395p OS=Drosophila melanogaster
GN=CG31158 PE=2 SV=1
Length = 1062

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1

Query: 28 LKSLYKAGQTKNLP--LDNVAQKLIHQNKSSYVLLLVGLGPFCSPP 159
LKSLY+A +TK L LD A L Q ++ L VGL PF PP
Sbjct: 742 LKSLYQAIKTKPLEWALDEEAGDLQQQRANNSALGNVGLNPFLDPP 787


>tr|A8JR82|A8JR82_DROME CG31158, isoform C OS=Drosophila melanogaster
GN=CG31158 PE=1 SV=1
Length = 1387

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1

Query: 28 LKSLYKAGQTKNLP--LDNVAQKLIHQNKSSYVLLLVGLGPFCSPP 159
LKSLY+A +TK L LD A L Q ++ L VGL PF PP
Sbjct: 1067 LKSLYQAIKTKPLEWALDEEAGDLQQQRANNSALGNVGLNPFLDPP 1112


>tr|A8JR81|A8JR81_DROME CG31158, isoform D OS=Drosophila melanogaster
GN=CG31158 PE=4 SV=1
Length = 1521

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1

Query: 28 LKSLYKAGQTKNLP--LDNVAQKLIHQNKSSYVLLLVGLGPFCSPP 159
LKSLY+A +TK L LD A L Q ++ L VGL PF PP
Sbjct: 1201 LKSLYQAIKTKPLEWALDEEAGDLQQQRANNSALGNVGLNPFLDPP 1246


>tr|B6HD01|B6HD01_PENCH Putative uncharacterized protein Pc19g00020
OS=Penicillium chrysogenum Wisconsin 54-1255
GN=Pc19g00020 PE=4 SV=1
Length = 311

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2

Query: 95 YIKTNPHTCCSWWVSVLFALLLPEDEARASRCCPCEKTAAQQVMEGDCIQGGCS 256
+I T+ C W V + EA A C + T+ QQ M GDCI G S
Sbjct: 24 FIITDGFVTCLWLSQVARCVQRGFSEATAGYCDDLDTTSCQQRMNGDCIDEGNS 77