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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963522
Clone id TST39A01NGRL0016_M06
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_M06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCAACGGGCTTGCGAGCTATTGTGTAGGCGCAGCTGGTTGGGGAACGATAATATGTTGG
TGTGTATGTGATCTGTATAGAGAGAAATTAAGAGGATAGAATATAATTGGTGCAGCTATG
AAAACGTCAGCGACTGCGTCGACGAGCAGCAACATGATGAGCAGTGAGAGGAGTAGCATG
AGTAGCTGTGGAAGGGGGCTGGGGCTGGCGAGGACGGCCAAGGCCGTAGCGGAGGCGGTG
ATCGTCGCGGCTTGCTTGATGTGGGTGCTCTACTGGTTCTTCAAGCCGGAGCCGCAGGCC
GACGATACCCACCTCTCCAAGAACACCCGCTCTCGCTTCTTCCGCACTGATGGCCGGGAA
GGATTTTCCCTTATATACCAAACATTGCCTTTTGTTGTTGTGGCCATTTTGAGCTTTTTG
GTGATTGAGCTACGAGCTTTTATCAGGTCAAAAGAGTCAATGCCATCCATACAGGCACAA
CAAAAATTAAGATTTTCAAGTTTAAACGCCTACCCCTTGTGGGTGCATAGTCCTTTTGGA
GTTGTAACTATGGCTGATTTTCTCTTCATTATTGGCATACTCTTCATGGTGTTTTATCAC
TTTGGGAGAGTTACTCATCTATCGTTCCAAGAAATCGAGAATGGAACCGT
■■Homology search results ■■ -
sp_hit_id A4FBB2
Definition sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338)
Align length 57
Score (bit) 32.7
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963522|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_M06, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Sacchar...    33   1.7  
sp|Q58286|Y876_METJA Putative ABC transporter permease protein M...    30   8.4  

>sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=apt PE=3 SV=1
          Length = 182

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = -3

Query: 372 KGKSFPAISAEEARAGVLGEV-------GIVGLRLRLEEPVEHPHQASRDDHRLRYG 223
           +G  F  ++  EAR  +LG         G+VGLR    +P + P  A R D+RL YG
Sbjct: 57  RGHDFDVVAGVEARGFLLGAAVAQAHGTGVVGLR----KPGKLPEVAHRVDYRLEYG 109


>sp|Q58286|Y876_METJA Putative ABC transporter permease protein
           MJ0876 OS=Methanocaldococcus jannaschii GN=MJ0876 PE=3
           SV=1
          Length = 351

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +1

Query: 394 VVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFII 573
           +V  +LS+  + LRA++ +      IQ        SL+   L    P   +T+   +FII
Sbjct: 154 IVALLLSYFFMGLRAYLIANAEELKIQEYWGFTIGSLSKITLGDVIP---MTICSIIFII 210

Query: 574 GILFMV 591
           G++F++
Sbjct: 211 GVMFLI 216
tr_hit_id Q6PND7
Definition tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus
Align length 128
Score (bit) 42.7
E-value 0.019
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963522|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_M06, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2 ...    43   0.019
tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane compo...    39   0.21 
tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genom...    39   0.21 
tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis...    39   0.21 
tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana ...    38   0.47 
tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=F...    38   0.47 
tr|Q000W4|Q000W4_9ROSI Fe(III)-chelate reductase OS=Citrus junos...    38   0.61 
tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4...    37   0.80 
tr|B6AYT1|B6AYT1_9RHOB TRAP transporter, DctM-like membrane prot...    37   1.4  
tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops...    37   1.4  
tr|Q8W110|Q8W110_ARATH AT5g23980/MZF18_14 OS=Arabidopsis thalian...    36   1.8  
tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=...    36   2.3  
tr|A6FS35|A6FS35_9RHOB TRAP C4-dicarboxylate transport system pe...    35   3.0  
tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana...    35   3.0  
tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m...    35   3.0  
tr|Q9FLW2|Q9FLW2_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4...    35   4.0  
tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo...    35   4.0  
tr|B5BMT4|B5BMT4_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B3XUQ4|B3XUQ4_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B3XT30|B3XT30_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B2NGN9|B2NGN9_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B2NEI6|B2NEI6_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B2D9L7|B2D9L7_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B1RY54|B1RY54_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.7  
tr|B5KGU9|B5KGU9_MALXI Ferric reductase OS=Malus xiaojinensis GN...    34   6.7  

>tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2
           SV=1
          Length = 694

 Score = 42.7 bits (99), Expect = 0.019
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
 Frame = +1

Query: 256 LMWVLYWFFKPEPQADDTHLSKNTRSRFFRTD--GREGFSLIYQTLPFVVVAILSFLVIE 429
           L W+  W   P        L K  R + +++   G EG SL+  T P + +AIL  +   
Sbjct: 20  LGWIFLWVMMPTNTYRKKWLPK-VREKSYKSTYFGSEGTSLLMYTFPILFIAILGCVYNH 78

Query: 430 LRAFIRSKESMPSIQAQQKLRFSSLNAY--PLWVHSPFGVVTMADFLFIIGILFMVFYHF 603
           L      K S P+++ ++  +   L  +  P  V  P G+V+  +   +   + ++ + F
Sbjct: 79  L----EKKRSDPNVKTRKGTKHHGLAMWKQPAIVKGPLGIVSWTELTLLTMFIILLVWSF 134

Query: 604 GRVTHLSF 627
               H SF
Sbjct: 135 ATYLHNSF 142


>tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane
           component OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_163308 PE=4 SV=1
          Length = 801

 Score = 39.3 bits (90), Expect = 0.21
 Identities = 26/126 (20%), Positives = 49/126 (38%)
 Frame = +1

Query: 262 WVLYWFFKPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAF 441
           W   WF  P  +      +      +     +   +      P + +AI + L +EL   
Sbjct: 68  WFTLWFRMPSTEGRAFRKTVQDELNYSTFWSKAATNYTMYAAPVIALAIFALLFLELEER 127

Query: 442 IRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHL 621
              +    + Q      + ++   P+ V +P GVVT+ D + I  +L    + +GR+T  
Sbjct: 128 YPERRCPSAKQPMLVRLYRAIWTQPILVKTPIGVVTIIDIVIIGMVLVCTCWIWGRLTVR 187

Query: 622 SFQEIE 639
            F  I+
Sbjct: 188 QFAAID 193


>tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026928001
           PE=4 SV=1
          Length = 714

 Score = 39.3 bits (90), Expect = 0.21
 Identities = 28/106 (26%), Positives = 51/106 (48%)
 Frame = +1

Query: 325 TRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSL 504
           T S +F   GR+G +++  T P +  A+L    + L   + + +S  S     K R + L
Sbjct: 58  TDSTYF---GRQGATILIYTFPVLFSAVLGCAYLHLGKKLNNNKSKSS----PKDRLAVL 110

Query: 505 NAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIEN 642
              P+ V  P G+V+M + LF++  + ++ +         FQ IE+
Sbjct: 111 KR-PVLVKGPLGIVSMIEMLFLVMFIALLVWSIYTYLRTGFQGIED 155


>tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034719 PE=4 SV=1
          Length = 792

 Score = 39.3 bits (90), Expect = 0.21
 Identities = 28/106 (26%), Positives = 51/106 (48%)
 Frame = +1

Query: 325 TRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSL 504
           T S +F   GR+G +++  T P +  A+L    + L   + + +S  S     K R + L
Sbjct: 58  TDSTYF---GRQGATILIYTFPVLFSAVLGCAYLHLGKKLNNNKSKSS----PKDRLAVL 110

Query: 505 NAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIEN 642
              P+ V  P G+V+M + LF++  + ++ +         FQ IE+
Sbjct: 111 KR-PVLVKGPLGIVSMIEMLFLVMFIALLVWSIYTYLRTGFQGIED 155


>tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana
           GN=At1g01590 PE=4 SV=1
          Length = 704

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 18/95 (18%), Positives = 48/95 (50%)
 Frame = +1

Query: 352 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 531
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 532 PFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEI 636
           P G+VT+ + +F+   + ++ +      + +F  +
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWSLANYMYRTFVNV 149


>tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=FRO1
           PE=4 SV=1
          Length = 704

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 18/95 (18%), Positives = 48/95 (50%)
 Frame = +1

Query: 352 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 531
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 532 PFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEI 636
           P G+VT+ + +F+   + ++ +      + +F  +
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWSLANYMYRTFVNV 149


>tr|Q000W4|Q000W4_9ROSI Fe(III)-chelate reductase OS=Citrus junos
           PE=2 SV=1
          Length = 700

 Score = 37.7 bits (86), Expect = 0.61
 Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
 Frame = +1

Query: 256 LMWVLYWFFKPEPQADDT---HLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVI 426
           L W+L W   P     +T    L+    S +FR    +G +L+  + P +++A+L  + +
Sbjct: 17  LGWLLVWALIPTKVYKNTWTPKLNNKLNSTYFR---EQGTNLLLFSFPVMLIALLGCVYL 73

Query: 427 ELRAFIRSKESMPSIQAQQKLRFSSL--NAYPLWVHSPFGVVTMADFLFIIGILFMVFYH 600
            L+      +    +Q+++K+R   L  +  P+ V +P G+VT  +    I ++F+ F  
Sbjct: 74  HLQ------KKPNKLQSKRKMRSPRLFFSQRPVLVMAPLGIVTAIE--LTIAVMFVAFLI 125

Query: 601 FGRVTHL 621
           +    +L
Sbjct: 126 WALANYL 132


>tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 703

 Score = 37.4 bits (85), Expect = 0.80
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
 Frame = +1

Query: 256 LMWVLYWFF--------KPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAIL 411
           L W+L W          K  P+     LSK   + +F   G +G +L+  T+P + +A+L
Sbjct: 17  LGWILVWIMISTNLFKSKWTPK-----LSKYLNTTYF---GPQGTNLVLLTVPMMFIAVL 68

Query: 412 SFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMV 591
           S + +     IR+K S   +   ++ +   +    + V +P G+VT  +  F +  + ++
Sbjct: 69  SCVYLH----IRNKLSQSYLYECREWKLKRIMGRVIMVMNPLGIVTATELTFSLLFVALL 124

Query: 592 FYHFGRVTHLSF 627
            +      +LS+
Sbjct: 125 AWSLYNYLYLSY 136


>tr|B6AYT1|B6AYT1_9RHOB TRAP transporter, DctM-like membrane protein
           OS=Rhodobacterales bacterium HTCC2083 GN=RB2083_345 PE=4
           SV=1
          Length = 784

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 27/98 (27%), Positives = 45/98 (45%)
 Frame = +1

Query: 334 RFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAY 513
           R  R D + G  +I+ TL     A++  ++I +   +R  +  PS +      F    AY
Sbjct: 548 RRLREDDKSGKVVIFSTL-----AVILMILIGVNFDLRVNQGSPSFETWVAFAF----AY 598

Query: 514 PLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSF 627
             W+++ FG++     LF  GIL  V     +VT + F
Sbjct: 599 TAWLYAFFGLLFSCYVLFKAGILPPVVRETAKVTSMVF 636


>tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidopsis
           thaliana GN=At5g49730 PE=2 SV=1
          Length = 738

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 31/112 (27%), Positives = 55/112 (49%)
 Frame = +1

Query: 262 WVLYWFFKPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAF 441
           WV++       Q  D  L+  +   F  T G     LI+ + P +V+++L+ L +     
Sbjct: 39  WVVFLMMMYPEQLGDDFLTFVSSKTFLGTTGT--MFLIF-SCPILVISVLASLYL----I 91

Query: 442 IRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMVFY 597
           I  ++ + + +   K     L  +P+ V  PFGVV+ A+FL I  ++F VF+
Sbjct: 92  ISGEDKVFTKKKISKFPRFRLWTFPVLVDGPFGVVSAAEFLGI--MVFSVFF 141