DK963533 |
Clone id |
TST39A01NGRL0016_M17 |
Library |
TST39 |
Length |
626 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_M17. 5' end sequence. |
Accession |
DK963533 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
CGTCTCCCTCGAGATCATCATCTTTTCGCAGGGGAAAGAGAAAGCTTGGTTGCAGAGACC GTCGGGACGCCATGGCTGCAGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCC TCTCTGCCCACTCCTCCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCG CCAAATTCTCGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGA AGAAGAAGAGAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGG AGGCTCCCCCCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCT TGGCCGTTGATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTG CTCCGATGGGCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATT GGTTCAATCGCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCAC TTCTTCATCTTGCCGGCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAAT GGGAGAGCCGAACTCCTGGGCATCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
153 |
Score (bit) |
213.0 |
E-value |
6.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963533|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_M17, 5' (626 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 213 6e-55 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 209 9e-54 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 206 8e-53 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 195 2e-49 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 177 5e-44 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 173 7e-43 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 139 9e-33 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 139 1e-32 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 136 1e-31 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 134 4e-31 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 132 1e-30 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 132 2e-30 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 132 2e-30 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 130 7e-30 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 129 9e-30 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 129 9e-30 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 129 1e-29 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 129 1e-29 sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyce... 129 2e-29 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 128 3e-29 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 127 4e-29 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 125 1e-28 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 124 3e-28 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 123 9e-28 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 123 9e-28
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 213 bits (542), Expect = 6e-55 Identities = 104/153 (67%), Positives = 118/153 (77%) Frame = +3
Query: 168 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 347 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 348 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 527 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 528 LQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 LQYALLHLAGYDSVQE+DLK FRQW SR PGHP Sbjct: 147 LQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHP 179
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 209 bits (532), Expect = 9e-54 Identities = 93/100 (93%), Positives = 99/100 (99%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHP Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHP 114
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 206 bits (524), Expect = 8e-53 Identities = 96/105 (91%), Positives = 99/105 (94%), Gaps = 1/105 (0%) Frame = +3
Query: 315 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 491 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 492 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHP Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHP 179
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 195 bits (495), Expect = 2e-49 Identities = 86/100 (86%), Positives = 93/100 (93%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HP Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHP 112
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 177 bits (448), Expect = 5e-44 Identities = 78/100 (78%), Positives = 87/100 (87%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HP Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHP 116
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 173 bits (438), Expect = 7e-43 Identities = 80/101 (79%), Positives = 87/101 (86%) Frame = +3
Query: 324 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 503 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 504 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHP Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHP 107
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 139 bits (351), Expect = 9e-33 Identities = 63/101 (62%), Positives = 81/101 (80%) Frame = +3
Query: 324 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 503 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 504 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHP Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHP 102
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 139 bits (350), Expect = 1e-32 Identities = 63/96 (65%), Positives = 77/96 (80%) Frame = +3
Query: 339 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 518 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 519 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHP Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHP 103
>sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneumoniae GN=tkt PE=3 SV=2 Length = 658
Score = 136 bits (342), Expect = 1e-31 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +3
Query: 339 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 518 S+N IRFL +DA+ KANSGHPG+ MG APM + L+ + + NP P W NRDRF+LSAGH Sbjct: 5 SVNAIRFLGIDAINKANSGHPGVVMGAAPMAYSLFTKQLHINPAQPNWINRDRFILSAGH 64
Query: 519 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 G ML YALLHL+G++ V +++K FRQW S+TPGHP Sbjct: 65 GSMLLYALLHLSGFEDVSMDEIKSFRQWGSKTPGHP 100
>sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1 Length = 689
Score = 134 bits (337), Expect = 4e-31 Identities = 62/104 (59%), Positives = 79/104 (75%) Frame = +3
Query: 315 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 494 T + E INTIRFL+VD VE+A SGHPG+P+G + + ++LYD IM+YNPKNP WFNRD Sbjct: 29 TSKKIDELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRD 88
Query: 495 RFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHP 626 RF+LSAGHG + YA ++ G+D + EDLK FRQ S+TPGHP Sbjct: 89 RFILSAGHGSAMLYAAFYMFGFD-LTLEDLKAFRQLNSKTPGHP 131
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
147 |
Score (bit) |
217.0 |
E-value |
4.0e-55 |
Report |
|