DK963549
Clone id TST39A01NGRL0016_N09
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_N09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCTGCTCTCCCGTCCATCGAAAGTGTCGCGCCTCCGTGCTAGAGTTCTGGATGCATGCC
CGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAACTAGGGAAACTGCGTTAAAAAGACGG
ACTCTCTCTCTCTCTCTCTCACACACACACACACCCACCCGCATACACACACAGAACAAG
GGTTTCGATAGGATCTGTAACCCGCCCCATTCAAATTCATATCTCTGCTAATTCTGGCCT
TTGCCTTTTCGGTTGTGGGAAGCCCTTGTTACCCTCGTGTTTGGGTGAAAGTCTTGTTGT
AAGCTTGCTTTCTGGCCATGCAAGCATTCAGAGATCAATGGATTGTGATTATGATGACAA
ATATGTGCTAATGTACGGTGCGCTGGAGCAGGATTTTGACGAGCTTCAAGCGGAAGCGGC
AGAAGTTGCAGCTCTCTTGCAGAAGGCTAAAGAGAACAAGCTCCGTCTACAAACTGAGAT
TAAGTTTTTGAAGAGAAGGGCTTCAATGTTGAGAGCAAGTATGAG
■■Homology search results ■■ -
sp_hit_id Q8WXK8
Definition sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7 (Fragment) OS=Homo sapiens
Align length 89
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963549|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_N09, 5'
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7 (F... 32 1.4
sp|O94833|BPAEA_HUMAN Bullous pemphigoid antigen 1, isoforms 6/9... 32 1.4
sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Hom... 30 7.0

>sp|Q8WXK8|BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7
(Fragment) OS=Homo sapiens GN=DST PE=1 SV=1
Length = 3060

Score = 32.3 bits (72), Expect = 1.4
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +2

Query: 152 HPPAYTHRTRVSIGSVTRPIQIHISANSGLCLFGCGKPLLPSCL--------GEXXXXXX 307
H +Y++R+ S+ S T + + +N L L CG L+ SC+ G
Sbjct: 2 HSSSYSYRSSDSVFSNTTSTRTSLDSNENLLLVHCGPTLINSCISFGSESFDGHRLEMLQ 61

Query: 308 XXGHASIQRSMDCDYDDKYVLMYGALEQD 394
+ + S+ C +DK +L AL+ D
Sbjct: 62 QIANRVQRDSVIC--EDKLILAGNALQSD 88


>sp|O94833|BPAEA_HUMAN Bullous pemphigoid antigen 1, isoforms 6/9/10
OS=Homo sapiens GN=DST PE=1 SV=3
Length = 5171

Score = 32.3 bits (72), Expect = 1.4
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +2

Query: 152 HPPAYTHRTRVSIGSVTRPIQIHISANSGLCLFGCGKPLLPSCL--------GEXXXXXX 307
H +Y++R+ S+ S T + + +N L L CG L+ SC+ G
Sbjct: 2 HSSSYSYRSSDSVFSNTTSTRTSLDSNENLLLVHCGPTLINSCISFGSESFDGHRLEMLQ 61

Query: 308 XXGHASIQRSMDCDYDDKYVLMYGALEQD 394
+ + S+ C +DK +L AL+ D
Sbjct: 62 QIANRVQRDSVIC--EDKLILAGNALQSD 88


>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo
sapiens GN=NEK4 PE=1 SV=1
Length = 841

Score = 30.0 bits (66), Expect = 7.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2

Query: 410 LEARQNPAPAHRT--LAHICHHNHNPLISECLHGQKASLQQDFHPNTRVTRASHNRKGKG 237
L + +PA A R + +CHH + + EC+ ++ + D P+ + S +R+ +
Sbjct: 479 LGSSDSPASASRVAGITGVCHHAQDQVAGECIIEKQGRIHPDLQPHNSGSEPSLSRQRRQ 538

Query: 236 QN*QRYE 216
+ ++ E
Sbjct: 539 KRREQTE 545


tr_hit_id Q4SRM6
Definition tr|Q4SRM6|Q4SRM6_TETNG Chromosome undetermined SCAF14516, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 55
Score (bit) 36.2
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963549|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_N09, 5'
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4SRM6|Q4SRM6_TETNG Chromosome undetermined SCAF14516, whole ... 36 1.0

>tr|Q4SRM6|Q4SRM6_TETNG Chromosome undetermined SCAF14516, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00013843001 PE=4 SV=1
Length = 305

Score = 36.2 bits (82), Expect = 1.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +2

Query: 137 SHTHTHPPAYTHRTRVSI-----GSVTRP-IQIHISANSGLCLFGCGKPLLPSCL 283
+HTHTH +TH R+++ G++ P + NSG+C+F C L CL
Sbjct: 157 THTHTHTHTHTHTPRLTLWPSCWGALADPRFYLGRLTNSGICVFTCLSACLSVCL 211