DK963559 |
Clone id |
TST39A01NGRL0016_N20 |
Library |
TST39 |
Length |
431 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_N20. 5' end sequence. |
Accession |
DK963559 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
CAGGCCTGTTCTTACAGTCAACAAAATGGACAGGTGCTTTCTTGAGCTACAGGTTGAAGG TGAAGAGGCGTATCAGACTTTCCAGAGGGTGATAGAGAATGCAAATGTTATCATGGCAAC ATATGAAGATCCTCTCTTGGGTGATGTTCAGGTTTATCCAGAGAAAGGTACCGTTGCATT CTCTGCGGGTTTGCATGGATGGGCTTTTACACTTACCAACTTTGCTAAGATGTATGCCGC CAAGTTTGGAGTGGATGAAGCTAAAATGATGGACAGACTCTGGGGTGAGAACTACTTTGA CCCTGCAACCAAGAAATGGACTACTAAAAACACAGGGACTTCCACGTGCCAGAGGGGTTT CGTGCAGTTTATTTACAATCCAATCAAGCAGCTTATTAACATTTGTATGAATGATCAGAA AGATAAGCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
143 |
Score (bit) |
270.0 |
E-value |
2.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963559|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_N20, 5' (431 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris PE=2 SV=1 270 2e-72 sp|P28996|EF2_CHLKE Elongation factor 2 OS=Chlorella kessleri PE... 216 3e-56 sp|P32324|EF2_YEAST Elongation factor 2 OS=Saccharomyces cerevis... 178 7e-45 sp|Q23716|EF2_CRYPV Elongation factor 2 OS=Cryptosporidium parvu... 177 2e-44 sp|Q875S0|EF2_SACKL Elongation factor 2 OS=Saccharomyces kluyver... 176 3e-44 sp|Q875Z2|EF2_SACCA Elongation factor 2 OS=Saccharomyces castell... 176 3e-44 sp|Q6FYA7|EF2_CANGA Elongation factor 2 OS=Candida glabrata GN=E... 176 5e-44 sp|O14460|EF2_SCHPO Elongation factor 2 OS=Schizosaccharomyces p... 175 6e-44 sp|A5DI11|EF2_PICGU Elongation factor 2 OS=Pichia guilliermondii... 175 6e-44 sp|O13430|EF2_CANAL Elongation factor 2 OS=Candida albicans GN=E... 175 8e-44 sp|Q96X45|EF2_NEUCR Elongation factor 2 OS=Neurospora crassa GN=... 174 2e-43 sp|Q754C8|EF2_ASHGO Elongation factor 2 OS=Ashbya gossypii GN=EF... 173 3e-43 sp|Q6CPQ9|EF2_KLULA Elongation factor 2 OS=Kluyveromyces lactis ... 171 1e-42 sp|Q06193|EF2_ENTHI Elongation factor 2 OS=Entamoeba histolytica... 171 2e-42 sp|Q6BJ25|EF2_DEBHA Elongation factor 2 OS=Debaryomyces hansenii... 169 6e-42 sp|Q874B9|EF2_PICPA Elongation factor 2 OS=Pichia pastoris GN=EF... 168 1e-41 sp|Q1HPK6|EF2_BOMMO Translation elongation factor 2 OS=Bombyx mo... 158 1e-38 sp|P15112|EF2_DICDI Elongation factor 2 OS=Dictyostelium discoid... 157 1e-38 sp|P29691|EF2_CAEEL Elongation factor 2 OS=Caenorhabditis elegan... 156 4e-38 sp|P13060|EF2_DROME Elongation factor 2 OS=Drosophila melanogast... 155 5e-38 sp|Q17152|EF2_BLAHO Elongation factor 2 OS=Blastocystis hominis ... 139 6e-33 sp|Q90705|EF2_CHICK Elongation factor 2 OS=Gallus gallus GN=EEF2... 136 4e-32 sp|A0SXL6|EF2_CALJA Elongation factor 2 OS=Callithrix jacchus GN... 135 5e-32 sp|Q3SYU2|EF2_BOVIN Elongation factor 2 OS=Bos taurus GN=EEF2 PE... 135 5e-32 sp|Q5R8Z3|EF2_PONAB Elongation factor 2 OS=Pongo abelii GN=EEF2 ... 135 7e-32 sp|P13639|EF2_HUMAN Elongation factor 2 OS=Homo sapiens GN=EEF2 ... 135 7e-32 sp|P05197|EF2_RAT Elongation factor 2 OS=Rattus norvegicus GN=Ee... 134 2e-31 sp|P58252|EF2_MOUSE Elongation factor 2 OS=Mus musculus GN=Eef2 ... 134 2e-31 sp|P05086|EF2_MESAU Elongation factor 2 OS=Mesocricetus auratus ... 134 2e-31 sp|P09445|EF2_CRIGR Elongation factor 2 OS=Cricetulus griseus GN... 133 4e-31
>sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris PE=2 SV=1 Length = 843
Score = 270 bits (690), Expect = 2e-72 Identities = 125/143 (87%), Positives = 137/143 (95%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 RPVLTVNKMDRCFLELQV+GEEAY TFQ+VIENANVIMATYEDPLLGDVQVYPEKGTVAF Sbjct: 152 RPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGTSTCQRGF 361 SAGLHGWAFTL+NFAKMYA+KFGVDE+KMM+RLWGEN+FDPATKKWTTKN+G ++C+RGF Sbjct: 212 SAGLHGWAFTLSNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNSGNASCKRGF 271
Query: 362 VQFIYNPIKQLINICMNDQKDKL 430 VQF Y PIKQ+I CMNDQKDKL Sbjct: 272 VQFCYEPIKQIIAACMNDQKDKL 294
>sp|P28996|EF2_CHLKE Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1 Length = 845
Score = 216 bits (550), Expect = 3e-56 Identities = 99/143 (69%), Positives = 116/143 (81%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 RPVLT+NK+DRCFLEL ++ EEAY ++RVIENANVIMATY D LGD Q +PE GTV+F Sbjct: 152 RPVLTINKIDRCFLELMLDPEEAYLAYRRVIENANVIMATYADEHLGDTQTHPEAGTVSF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGTSTCQRGF 361 SAGLHGWAFTLT FA MYAAKFG D +MM++LWG+N+FD T+KWT K+TG TC+RGF Sbjct: 212 SAGLHGWAFTLTVFANMYAAKFGTDTKRMMEKLWGDNFFDATTRKWTKKHTGADTCKRGF 271
Query: 362 VQFIYNPIKQLINICMNDQKDKL 430 QFIY PIK +I MND KDKL Sbjct: 272 CQFIYEPIKTVIEAAMNDNKDKL 294
>sp|P32324|EF2_YEAST Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1 Length = 842
Score = 178 bits (452), Expect = 7e-45 Identities = 83/145 (57%), Positives = 108/145 (74%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PV+ +NK+DR LELQV E+ YQTF R +E+ NVI++TY D +LGDVQVYP +GTVAF Sbjct: 152 KPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 +GLHGWAFT+ FA YA KFGVD+AKMMDRLWG+++F+P TKKWT K+T +R Sbjct: 212 GSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F FI +PI +L MN +KD++ Sbjct: 272 AFNMFILDPIFRLFTAIMNFKKDEI 296
>sp|Q23716|EF2_CRYPV Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1 Length = 832
Score = 177 bits (448), Expect = 2e-44 Identities = 87/143 (60%), Positives = 109/143 (76%), Gaps = 1/143 (0%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 RPVL VNK+DR LELQ E E+ YQ F RVIEN NVI++TY D L+GDVQV+PEKGTV+F Sbjct: 146 RPVLHVNKVDRALLELQWEAEDIYQNFTRVIENVNVIISTYSDELMGDVQVFPEKGTVSF 205
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWT-TKNTGTSTCQRG 358 +GLHGWAFT+ FA++YA KFGV+++KMM RLWG+N+F+P TKK+T T+ G+ +R Sbjct: 206 GSGLHGWAFTIEKFARIYAKKFGVEKSKMMQRLWGDNFFNPETKKFTKTQEPGS---KRA 262
Query: 359 FVQFIYNPIKQLINICMNDQKDK 427 F QFI PI QL + MN K K Sbjct: 263 FCQFIMEPICQLFSSIMNGDKAK 285
>sp|Q875S0|EF2_SACKL Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1 Length = 842
Score = 176 bits (447), Expect = 3e-44 Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PV+ VNK+DR LELQV E+ YQ+F R +E+ NVI++TY D +LGDVQVYP KGT+AF Sbjct: 152 KPVVCVNKVDRALLELQVSKEDLYQSFARTVESVNVIISTYADEVLGDVQVYPSKGTIAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 +GLHGWAFT+ FA Y+ KFGVD KMM+RLWG++YF+P TKKWT K T T +R Sbjct: 212 GSGLHGWAFTIRQFANRYSKKFGVDREKMMERLWGDSYFNPKTKKWTNKETDTDGKPLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F F+ +PI +L + MN +KD++ Sbjct: 272 AFNMFVLDPIFRLFSAIMNFKKDEI 296
>sp|Q875Z2|EF2_SACCA Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1 Length = 842
Score = 176 bits (447), Expect = 3e-44 Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PV+ +NK+DR LELQV E+ YQ+F R +E+ NVI++TY D +LGDVQVYP KGTVAF Sbjct: 152 KPVVCINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYADEILGDVQVYPSKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 +GLHGWAFT+ FA+ YA KFGVD+ KMM+RLWG++YF+P TKKWT K T +R Sbjct: 212 GSGLHGWAFTIRQFAQRYAKKFGVDKVKMMERLWGDSYFNPKTKKWTNKETDADGKQLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F F+ +PI +L MN +KD++ Sbjct: 272 AFNMFVLDPIFRLFAAIMNFKKDEI 296
>sp|Q6FYA7|EF2_CANGA Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1 Length = 842
Score = 176 bits (445), Expect = 5e-44 Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PV+ +NK+DR LELQV E+ YQ+F R +E+ NVI++TY D +LGDVQVYP KGTVAF Sbjct: 152 KPVVCINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYSDEVLGDVQVYPSKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 +GLHGWAFT+ FA YA KFGVD+ KMM+RLWG+++F+P TKKWT K T T +R Sbjct: 212 GSGLHGWAFTIRQFATRYAKKFGVDKQKMMERLWGDSFFNPKTKKWTNKETDTDGKPLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F F+ +PI +L MN +KD++ Sbjct: 272 AFNMFVLDPIFRLFAAIMNFKKDEI 296
>sp|O14460|EF2_SCHPO Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2 Length = 842
Score = 175 bits (444), Expect = 6e-44 Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 RPV+ VNK+DR LELQ+ EE YQ F RV+E+ NV+++TY D +LGD QV+P+KGTVAF Sbjct: 152 RPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDKVLGDCQVFPDKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 ++GLHGWAFT+ FA YA KFG+D KMM RLWGENYF+P TKKW+ T ++ QR Sbjct: 212 ASGLHGWAFTVRQFANRYAKKFGIDRNKMMQRLWGENYFNPKTKKWSKSATDANGNSNQR 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F FI +PI ++ + MN +KD++ Sbjct: 272 AFNMFILDPIYRIFDAVMNSRKDEV 296
>sp|A5DI11|EF2_PICGU Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1 Length = 842
Score = 175 bits (444), Expect = 6e-44 Identities = 82/145 (56%), Positives = 106/145 (73%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PVL VNK+DR LELQV E+ YQTF R +E+ NVI++TY DP LGD QVYP+KGTVAF Sbjct: 152 KPVLVVNKVDRALLELQVSKEDLYQTFARTVESVNVIISTYVDPALGDAQVYPDKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 +GLHGWAFT+ FA Y+ KFGVD AKMM+RLWG+++F+P TKKWT K+ +R Sbjct: 212 GSGLHGWAFTVRQFALRYSKKFGVDRAKMMERLWGDSFFNPKTKKWTNKDKDADGKPLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F F+ +PI +L MN +KD++ Sbjct: 272 AFNMFVLDPIFRLFAAIMNFKKDEI 296
>sp|O13430|EF2_CANAL Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2 Length = 842
Score = 175 bits (443), Expect = 8e-44 Identities = 81/145 (55%), Positives = 108/145 (74%), Gaps = 2/145 (1%) Frame = +2
Query: 2 RPVLTVNKMDRCFLELQVEGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAF 181 +PV+ +NK+DR LELQ E+ YQTF R +E+ NVI++TY DP+LGDVQVYP+KGTVAF Sbjct: 152 KPVVVINKVDRALLELQTTKEDLYQTFARTVESVNVIISTYCDPVLGDVQVYPQKGTVAF 211
Query: 182 SAGLHGWAFTLTNFAKMYAAKFGVDEAKMMDRLWGENYFDPATKKWTTKNTGT--STCQR 355 ++GLHGWAFT+ FA Y+ KFGVD+ KMM+RLWG++YF+P TKKWT K+ +R Sbjct: 212 ASGLHGWAFTVRQFANKYSKKFGVDKEKMMERLWGDSYFNPKTKKWTNKDKDADGKPLER 271
Query: 356 GFVQFIYNPIKQLINICMNDQKDKL 430 F FI +PI +L MN +KD++ Sbjct: 272 AFNMFILDPIFRLFAAIMNFKKDEI 296
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U6Z5 |
Definition |
tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
143 |
Score (bit) |
281.0 |
E-value |
2.0e-74 |
Report |
|