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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963562
Clone id TST39A01NGRL0016_N23
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_N23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAAGGATTGGCAGTCTTACGTGAGGACCTGGTTCAACCAGCCCGCAAGGAAGAAGCGCAG
ACGCCTTGCCCGTCAAAAGAAGGCTGTGCGGATCTTCCCTCGTCCAACAAGCGGGCCTCT
TCGCCCTGTTGTGCATTCGCAAACACTCAAATACAACATGAAGGTCCGTGCTGGCCGCGG
GTTTACCTTGGAAGAGTTGAAGGTGGCGGGATTTCCATAAAACTGGCACCAACCATAGGT
ATTGCAGTTGATCATCGAAGGAAAAATCGATGCCTTGAAAGTCTCCAGTCGAATGTGCAG
AGGCTTAACACCTATAAAGCGAAATTGATTGTCTTCCCTCGCCGATCAAAGAAGACTAAG
GCTGGTGATGCTAGCCAGGAGGAGCTTGCAAGTGCCATGCAGGTCCAGGGCCCTGTTATT
CCTATTACTCGGGAGAAGCCAGGTGTGGAGGTTGTTGCCATTACAGATGACTTGAAGGCC
AACAAAGCTTTTGCCAAGCTTCGACTGGAAAGGATGAATAAGCGCTTGATGGGTGTGCGC
AAAAAGAGAGCAGCAGAAGCTGAGAAAGATGAGAAGAAGTAATAGCTGTAACAGGTC
■■Homology search results ■■ -
sp_hit_id Q90Z10
Definition sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio
Align length 117
Score (bit) 115.0
E-value 3.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963562|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_N23, 5'
         (597 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio GN...   115   3e-45
sp|Q56JZ1|RL13_BOVIN 60S ribosomal protein L13 OS=Bos taurus GN=...   110   1e-42
sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 OS=Ictalurus punc...   103   7e-42
sp|P41123|RL13_RAT 60S ribosomal protein L13 OS=Rattus norvegicu...   108   9e-42
sp|P47963|RL13_MOUSE 60S ribosomal protein L13 OS=Mus musculus G...   106   3e-41
sp|P26373|RL13_HUMAN 60S ribosomal protein L13 OS=Homo sapiens G...   106   5e-41
sp|P41125|RL13_CHICK 60S ribosomal protein L13 OS=Gallus gallus ...   104   3e-40
sp|Q9Z313|RL13_CRIGR 60S ribosomal protein L13 OS=Cricetulus gri...   103   5e-40
sp|Q962U1|RL13_SPOFR 60S ribosomal protein L13 OS=Spodoptera fru...    93   4e-37
sp|P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis...   149   8e-36
sp|P41128|RL131_BRANA 60S ribosomal protein L13-1 OS=Brassica na...   148   2e-35
sp|P41129|RL132_BRANA 60S ribosomal protein L13-2 OS=Brassica na...   144   3e-34
sp|O74175|RL13_SCHPO 60S ribosomal protein L13 OS=Schizosaccharo...    85   6e-34
sp|Q9FF90|RL133_ARATH 60S ribosomal protein L13-3 OS=Arabidopsis...   141   2e-33
sp|Q9SMT4|RL132_ARATH Putative 60S ribosomal protein L13-2 OS=Ar...   131   3e-30
sp|P91128|RL13_CAEEL 60S ribosomal protein L13 OS=Caenorhabditis...    89   4e-30
sp|Q54E20|RL13_DICDI 60S ribosomal protein L13 OS=Dictyostelium ...    79   2e-29
sp|O48513|RL13_CHLSW 60S ribosomal protein L13 OS=Chlamydomonas ...   127   4e-29
sp|Q12690|RL13A_YEAST 60S ribosomal protein L13-A OS=Saccharomyc...    77   2e-25
sp|P40212|RL13B_YEAST 60S ribosomal protein L13-B OS=Saccharomyc...    76   3e-25
sp|P41126|RL13_DROME 60S ribosomal protein L13 OS=Drosophila mel...   113   8e-25
sp|O59931|RL13_CANAL 60S ribosomal protein L13 OS=Candida albica...    70   6e-24
sp|Q876B2|RL13_SACEX 60S ribosomal protein L13 OS=Saccharomyces ...    70   3e-23
sp|P49627|RL13_TOBAC 60S ribosomal protein L13 OS=Nicotiana taba...   102   1e-21
sp|O46157|RL13_LUMRU 60S ribosomal protein L13 OS=Lumbricus rube...   100   1e-20
sp|Q95043|RL13_SCHMA 60S ribosomal protein L13 OS=Schistosoma ma...    87   6e-17
sp|Q9SY33|PER7_ARATH Peroxidase 7 OS=Arabidopsis thaliana GN=PER...    37   0.100
sp|Q9LEV3|UMP3_ARATH Uncharacterized protein At5g10860, mitochon...    33   1.1  
sp|Q96JA4|M4A14_HUMAN Membrane-spanning 4-domains subfamily A me...    32   3.2  
sp|Q812A5|PTOR1_MOUSE Protor-1 OS=Mus musculus GN=Protor1 PE=2 SV=2    30   9.3  

>sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio
           GN=rpl13 PE=2 SV=3
          Length = 211

 Score =  115 bits (287), Expect(2) = 3e-45
 Identities = 59/117 (50%), Positives = 81/117 (69%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI+ K+A TIGI+VD RR+NR  ESLQ+NVQRL  Y+ KLI+FPR++ K K G
Sbjct: 78  LEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D+++EEL  A Q+ GPV+PI +     +   I++D K  KAFA LR+ R N RL G+
Sbjct: 138 DSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGI 194



 Score = 86.7 bits (213), Expect(2) = 3e-45
 Identities = 42/70 (60%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  VRTWFNQP                I PRP SGPLRPVV   T++Y+ KVRAGRG
Sbjct: 16  KDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85


>sp|Q56JZ1|RL13_BOVIN 60S ribosomal protein L13 OS=Bos taurus
           GN=RPL13 PE=2 SV=3
          Length = 211

 Score =  110 bits (275), Expect(2) = 1e-42
 Identities = 58/110 (52%), Positives = 75/110 (68%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+C ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+PI       +   IT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 194



 Score = 82.4 bits (202), Expect(2) = 1e-42
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGPLRPVV   T++Y+ KVRAGRG
Sbjct: 16  KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPLRPVVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 OS=Ictalurus
           punctatus GN=rpl13 PE=2 SV=3
          Length = 211

 Score =  103 bits (257), Expect(2) = 7e-42
 Identities = 55/117 (47%), Positives = 76/117 (64%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI+ ++A TIGIAVD RR+NR  ESL  NVQRL  Y++KLI+FPR+    K G
Sbjct: 78  LEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D+++EE+  A Q+ GPV+PI       +   IT++ K   AFA LR+ R N RL G+
Sbjct: 138 DSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLFGI 194



 Score = 86.7 bits (213), Expect(2) = 7e-42
 Identities = 41/70 (58%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  VRTWFNQP                I PRP +GPLRP+V   T++YN KVRAGRG
Sbjct: 16  KDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85


>sp|P41123|RL13_RAT 60S ribosomal protein L13 OS=Rattus norvegicus
           GN=Rpl13 PE=1 SV=2
          Length = 211

 Score =  108 bits (270), Expect(2) = 9e-42
 Identities = 58/110 (52%), Positives = 75/110 (68%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+  ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+PI       +  AIT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMPIRNVYKKEKARAITEEEKNFKAFASLRMARANARLFGI 194



 Score = 81.3 bits (199), Expect(2) = 9e-42
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGP+RP+V   T++Y+ KVRAGRG
Sbjct: 16  KDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>sp|P47963|RL13_MOUSE 60S ribosomal protein L13 OS=Mus musculus
           GN=Rpl13 PE=2 SV=3
          Length = 211

 Score =  106 bits (265), Expect(2) = 3e-41
 Identities = 57/110 (51%), Positives = 74/110 (67%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+  ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+PI       +   IT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 194



 Score = 81.3 bits (199), Expect(2) = 3e-41
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGP+RP+V   T++Y+ KVRAGRG
Sbjct: 16  KDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>sp|P26373|RL13_HUMAN 60S ribosomal protein L13 OS=Homo sapiens
           GN=RPL13 PE=1 SV=4
          Length = 211

 Score =  106 bits (264), Expect(2) = 5e-41
 Identities = 56/110 (50%), Positives = 74/110 (67%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+  ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+P+       +   IT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 194



 Score = 81.3 bits (199), Expect(2) = 5e-41
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGP+RP+V   T++Y+ KVRAGRG
Sbjct: 16  KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>sp|P41125|RL13_CHICK 60S ribosomal protein L13 OS=Gallus gallus
           GN=RPL13 PE=2 SV=2
          Length = 211

 Score =  104 bits (260), Expect(2) = 3e-40
 Identities = 55/110 (50%), Positives = 74/110 (67%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI+ + A TIGI+VD RR+N+  ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GINKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+PI       +   I+++ K  KAFA LR+ R N RL G+
Sbjct: 145 KMATQLSGPVMPIRNVFKREKARVISEEEKNFKAFASLRMARANARLFGI 194



 Score = 80.1 bits (196), Expect(2) = 3e-40
 Identities = 37/70 (52%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP +GP+RP+V   T++Y+ KVRAGRG
Sbjct: 16  KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPVAGPIRPIVRCPTVRYHKKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEELK+AG
Sbjct: 76  FSLEELKLAG 85


>sp|Q9Z313|RL13_CRIGR 60S ribosomal protein L13 OS=Cricetulus
           griseus GN=RPL13 PE=2 SV=3
          Length = 211

 Score =  103 bits (256), Expect(2) = 5e-40
 Identities = 56/110 (50%), Positives = 73/110 (66%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+  ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+ I       +   IT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMRIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 194



 Score = 80.9 bits (198), Expect(2) = 5e-40
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGP+RP+V   T++Y+ KVRAGRG
Sbjct: 16  KDWQRRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>sp|Q962U1|RL13_SPOFR 60S ribosomal protein L13 OS=Spodoptera
           frugiperda GN=RpL13 PE=2 SV=1
          Length = 219

 Score = 92.8 bits (229), Expect(2) = 4e-37
 Identities = 51/117 (43%), Positives = 76/117 (64%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  +   G++   A TIGIAVD RR+N+ +ESLQ NVQRL  Y+A+LI+FP + KK   G
Sbjct: 77  LREIRAAGLNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKG 135

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           +A++EE   A Q++GP++P+ +  P     AIT++ K  KA+  LR  R   +L+G+
Sbjct: 136 EANEEERKLATQLRGPLMPVQQPAPKSIARAITEEEKDFKAYQYLRGARSIAKLVGI 192



 Score = 81.6 bits (200), Expect(2) = 4e-37
 Identities = 36/70 (51%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ +V+TWFNQP                + PRP +GPLRPVV   T++Y+ KVRAGRG
Sbjct: 15  KDWQRFVKTWFNQPARRHRRKQNRIKKAKAVAPRPAAGPLRPVVRCPTIRYHTKVRAGRG 74

Query: 182 FTLEELKVAG 211
           FTL E++ AG
Sbjct: 75  FTLREIRAAG 84


>sp|P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis
           thaliana GN=RPL13B PE=1 SV=1
          Length = 206

 Score =  149 bits (377), Expect = 8e-36
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI  KLAPTIGIAVDHRRKNR LE LQ+NVQRL TYK KL++FPRR++K KAG
Sbjct: 76  LEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAG 135

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMG 534
           D++ EELA+A QVQG  +PI REKP +E+V +T ++K+ KAF K+RLER NKR  G
Sbjct: 136 DSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191



 Score =  103 bits (257), Expect = 7e-22
 Identities = 48/72 (66%), Positives = 51/72 (70%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ+YV+TWFNQP                IFPRPTSGPLRPVVH QTLKYNMKVR G+G
Sbjct: 14  KHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKG 73

Query: 182 FTLEELKVAGFP 217
           FTLEELK AG P
Sbjct: 74  FTLEELKAAGIP 85
tr_hit_id Q29NF8
Definition tr|Q29NF8|Q29NF8_DROPS 60S ribosomal protein L13 OS=Drosophila pseudoobscura pseudoobscura
Align length 117
Score (bit) 117.0
E-value 1.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963562|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_N23, 5'
         (597 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q29NF8|Q29NF8_DROPS 60S ribosomal protein L13 OS=Drosophila p...   117   1e-42
tr|B4G7T8|B4G7T8_DROPE GL18951 OS=Drosophila persimilis GN=GL189...   117   1e-42
tr|B4KH38|B4KH38_DROMO GI17580 OS=Drosophila mojavensis GN=GI175...   112   3e-42
tr|B4M9F1|B4M9F1_DROVI GJ17923 OS=Drosophila virilis GN=GJ17923 ...   113   3e-42
tr|B4MX35|B4MX35_DROWI GK15580 OS=Drosophila willistoni GN=GK155...   112   6e-42
tr|Q4SIB7|Q4SIB7_TETNG 60S ribosomal protein L13 OS=Tetraodon ni...   110   9e-42
tr|Q3SZG7|Q3SZG7_BOVIN 60S ribosomal protein L13 OS=Bos taurus G...   110   2e-41
tr|A9ZT88|A9ZT88_SOLSE Ribosomal protein L13 OS=Solea senegalens...   108   2e-41
tr|B5DGD9|B5DGD9_SALSA Ribosomal protein L13 OS=Salmo salar GN=r...   107   8e-41
tr|Q0GN70|Q0GN70_DICLA 60S ribosomal protein L13 OS=Dicentrarchu...   107   1e-40
tr|B5XD30|B5XD30_SALSA 60S ribosomal protein L13 OS=Salmo salar ...   106   1e-40
tr|Q6P639|Q6P639_XENTR 60S ribosomal protein L13 OS=Xenopus trop...   110   2e-40
tr|B3MPC5|B3MPC5_DROAN GF15733 OS=Drosophila ananassae GN=GF1573...   106   3e-40
tr|Q4KTH3|Q4KTH3_SUBDO 60S ribosomal protein L13 OS=Suberites do...   103   4e-40
tr|B4JCH0|B4JCH0_DROGR GH11063 OS=Drosophila grimshawi GN=GH1106...   107   5e-40
tr|A3KMT6|A3KMT6_XENLA 60S ribosomal protein L13 OS=Xenopus laev...   106   5e-40
tr|A4RY76|A4RY76_OSTLU 60S ribosomal protein L13 OS=Ostreococcus...   117   7e-40
tr|Q6NZ55|Q6NZ55_HUMAN 60S ribosomal protein L13 OS=Homo sapiens...   106   7e-40
tr|A8K4C8|A8K4C8_HUMAN 60S ribosomal protein L13 OS=Homo sapiens...   106   7e-40
tr|A2IAC5|A2IAC5_9NEOP 60S ribosomal protein L13 OS=Xenopsylla c...   100   9e-40
tr|B7UEB5|B7UEB5_DROSL Ribosomal protein L13 OS=Drosophila silve...   105   9e-40
tr|Q6DJN5|Q6DJN5_XENLA 60S ribosomal protein L13 OS=Xenopus laev...   107   1e-39
tr|A9SVU5|A9SVU5_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   165   2e-39
tr|A2I3Z1|A2I3Z1_MACHI 60S ribosomal protein L13 OS=Maconellicoc...    99   2e-39
tr|Q8AVQ1|Q8AVQ1_XENLA 60S ribosomal protein L13 OS=Xenopus laev...   104   3e-39
tr|A9S995|A9S995_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   164   5e-39
tr|B3RIP5|B3RIP5_TRIAD Putative uncharacterized protein OS=Trich...   109   7e-39
tr|Q6EE90|Q6EE90_PRODO 60S ribosomal protein L13 (Fragment) OS=P...   110   1e-38
tr|Q801H6|Q801H6_SCYCA 60S ribosomal protein L13 (Fragment) OS=S...   109   1e-38
tr|B0Z9L7|B0Z9L7_9BILA 60S ribosomal protein L13 OS=Lineus virid...    99   2e-38

>tr|Q29NF8|Q29NF8_DROPS 60S ribosomal protein L13 OS=Drosophila
           pseudoobscura pseudoobscura GN=GA18330 PE=3 SV=1
          Length = 217

 Score =  117 bits (294), Expect(2) = 1e-42
 Identities = 61/117 (52%), Positives = 80/117 (68%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++G G+S K A TIGIAVD RRKN+ LES Q N+QRL  Y++KLI+FP   KK + G
Sbjct: 77  LEELKGAGVSAKFAKTIGIAVDFRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRKG 136

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           ++S EE   A Q++GP++PI  EKP VE   +T D K  KAFA LR  R + RL+G+
Sbjct: 137 ESSVEECKLATQLRGPIMPIKAEKPVVEFREVTKDEKKFKAFATLRKARTDARLVGI 193



 Score = 78.6 bits (192), Expect(2) = 1e-42
 Identities = 37/70 (52%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ +V+TWFNQP                +FPRP SG LRPVV   T++Y+ K+R GRG
Sbjct: 15  KWWQRHVKTWFNQPARKHRRHENRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRTGRG 74

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 75  FTLEELKGAG 84


>tr|B4G7T8|B4G7T8_DROPE GL18951 OS=Drosophila persimilis GN=GL18951
           PE=4 SV=1
          Length = 217

 Score =  117 bits (294), Expect(2) = 1e-42
 Identities = 61/117 (52%), Positives = 80/117 (68%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++G G+S K A TIGIAVD RRKN+ LES Q N+QRL  Y++KLI+FP   KK + G
Sbjct: 77  LEELKGAGVSAKFAKTIGIAVDFRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRKG 136

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           ++S EE   A Q++GP++PI  EKP VE   +T D K  KAFA LR  R + RL+G+
Sbjct: 137 ESSVEECKLATQLRGPIMPIKAEKPVVEFREVTKDEKKFKAFATLRKARTDARLVGI 193



 Score = 78.6 bits (192), Expect(2) = 1e-42
 Identities = 37/70 (52%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ +V+TWFNQP                +FPRP SG LRPVV   T++Y+ K+R GRG
Sbjct: 15  KWWQRHVKTWFNQPARKHRRHENRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRTGRG 74

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 75  FTLEELKGAG 84


>tr|B4KH38|B4KH38_DROMO GI17580 OS=Drosophila mojavensis GN=GI17580
           PE=4 SV=1
          Length = 218

 Score =  112 bits (281), Expect(2) = 3e-42
 Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++G G+S K A TIGIAVD RRKN+ LES Q N+QRL  Y++KLI+FP   KK + G
Sbjct: 77  LEELKGAGLSYKFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRKG 136

Query: 367 DASQEELASAMQVQGPVIPITREKPG-VEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           +++ EE   A Q+QGPV+P+ +E P  VE   +T D K  KAFA LR  R + RL+G+
Sbjct: 137 ESTVEECKLATQLQGPVMPLKKELPAVVEFRDVTQDEKKFKAFATLRKARTDARLVGI 194



 Score = 82.8 bits (203), Expect(2) = 3e-42
 Identities = 39/70 (55%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ +VRTWFNQP                +FPRP SGPLRPVV   T++Y+ K+R GRG
Sbjct: 15  KWWQRHVRTWFNQPARKVRRHENRVKKAKAVFPRPASGPLRPVVRCPTIRYHTKLRTGRG 74

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 75  FTLEELKGAG 84


>tr|B4M9F1|B4M9F1_DROVI GJ17923 OS=Drosophila virilis GN=GJ17923
           PE=4 SV=1
          Length = 217

 Score =  113 bits (282), Expect(2) = 3e-42
 Identities = 57/114 (50%), Positives = 79/114 (69%)
 Frame = +1

Query: 196 VEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDAS 375
           ++G G+S   A TIGIAVD RRKN+ LES Q N+QRL  Y++KLI+FP   KK + G+++
Sbjct: 80  LKGAGLSQAFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRKGEST 139

Query: 376 QEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
            EE   A Q+QGP++P+ +E+P VE   +T D K  KAFA LR  R + RL+G+
Sbjct: 140 VEECKLATQLQGPIMPLKKEQPVVEFREVTKDEKKFKAFATLRKARTDARLVGI 193



 Score = 82.0 bits (201), Expect(2) = 3e-42
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ +VRTWFNQP                +FPRP SGPLRPVV   T++Y+ K+R GRG
Sbjct: 15  KWWQRHVRTWFNQPARKIRRHENRVKKAKAVFPRPASGPLRPVVRCPTIRYHTKLRTGRG 74

Query: 182 FTLEELKVAG 211
           FT+EELK AG
Sbjct: 75  FTIEELKGAG 84


>tr|B4MX35|B4MX35_DROWI GK15580 OS=Drosophila willistoni GN=GK15580
           PE=4 SV=1
          Length = 217

 Score =  112 bits (280), Expect(2) = 6e-42
 Identities = 59/114 (51%), Positives = 76/114 (66%)
 Frame = +1

Query: 196 VEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDAS 375
           ++G GIS   A TIGI+VD RRKN+ LES Q N+QRL  Y++KLI+FP   KK + G++S
Sbjct: 80  LKGAGISYGFAKTIGISVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKVRKGESS 139

Query: 376 QEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
            EE   A Q +GPV+PI  E P VE   +T D K  KAFA LR  R + RL+G+
Sbjct: 140 VEECKLATQFKGPVMPIKNETPVVEFREVTQDEKKFKAFATLRKARTDARLVGI 193



 Score = 82.0 bits (201), Expect(2) = 6e-42
 Identities = 38/70 (54%), Positives = 46/70 (65%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           K WQ +V+TWFNQP                +FPRP SGPLRPVV   T++Y+ K+RAGRG
Sbjct: 15  KWWQRHVKTWFNQPARKLRRHQTRVTKAKAVFPRPASGPLRPVVRCPTIRYHTKLRAGRG 74

Query: 182 FTLEELKVAG 211
           FT+EELK AG
Sbjct: 75  FTVEELKGAG 84


>tr|Q4SIB7|Q4SIB7_TETNG 60S ribosomal protein L13 OS=Tetraodon
           nigroviridis GN=GSTENG00017758001 PE=3 SV=1
          Length = 211

 Score =  110 bits (276), Expect(2) = 9e-42
 Identities = 59/117 (50%), Positives = 78/117 (66%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI  K A TIGI+VD RR+NR  ESLQ+NVQRL  Y++KLI+FPR++   K G
Sbjct: 78  LEELKAAGIHKKTARTIGISVDPRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D+S+EEL  A Q+ GPV+PI       +   I++D K  KAFA LR+ R N RL G+
Sbjct: 138 DSSEEELKMATQLTGPVMPIKTVHKREKARVISEDEKNFKAFASLRMARANARLFGI 194



 Score = 82.8 bits (203), Expect(2) = 9e-42
 Identities = 40/70 (57%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  VRTWFNQP                I PRP +GPLRP V   T++Y+ KVRAGRG
Sbjct: 16  KDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPAAGPLRPQVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85


>tr|Q3SZG7|Q3SZG7_BOVIN 60S ribosomal protein L13 OS=Bos taurus
           GN=RPL13 PE=2 SV=1
          Length = 294

 Score =  110 bits (275), Expect(2) = 2e-41
 Identities = 58/110 (52%), Positives = 75/110 (68%)
 Frame = +1

Query: 208 GISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAGDASQEEL 387
           GI  K+A TIGI+VD RR+N+C ESLQ+NVQRL  Y++KLI+FPR+    K GD+S EEL
Sbjct: 85  GIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEEL 144

Query: 388 ASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
             A Q+ GPV+PI       +   IT++ K  KAFA LR+ R N RL G+
Sbjct: 145 KLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 194



 Score = 82.4 bits (202), Expect(2) = 2e-41
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  V TWFNQP                I PRP SGPLRPVV   T++Y+ KVRAGRG
Sbjct: 16  KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPLRPVVRCPTVRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           F+LEEL+VAG
Sbjct: 76  FSLEELRVAG 85


>tr|A9ZT88|A9ZT88_SOLSE Ribosomal protein L13 OS=Solea senegalensis
           GN=RPL13 PE=2 SV=1
          Length = 211

 Score =  108 bits (270), Expect(2) = 2e-41
 Identities = 58/117 (49%), Positives = 77/117 (65%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI  K A TIGIAVD RR+NR  ESLQ+NVQRL  Y++KLI+FPR++   K G
Sbjct: 78  LEELKAAGIHKKTARTIGIAVDPRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D ++EEL  A Q+ GPV+PI       +   I++D K  KAFA LR+ R + RL G+
Sbjct: 138 DGTEEELKMATQLAGPVMPIKTVHKKEKARVISEDEKNFKAFASLRMARSHARLFGI 194



 Score = 84.3 bits (207), Expect(2) = 2e-41
 Identities = 41/70 (58%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  VRTWFNQP                I PRP SGPLRP V   T++Y+ KVRAGRG
Sbjct: 16  KDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVSGPLRPQVRCPTIRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85


>tr|B5DGD9|B5DGD9_SALSA Ribosomal protein L13 OS=Salmo salar
           GN=rpl13 PE=2 SV=1
          Length = 211

 Score =  107 bits (266), Expect(2) = 8e-41
 Identities = 57/117 (48%), Positives = 77/117 (65%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI  K A TIGI+VD RR+NR  ESLQ+NVQRL  Y++KLI+FPR++   K G
Sbjct: 78  LEELKAAGIHKKTARTIGISVDTRRRNRSSESLQANVQRLKEYRSKLILFPRKASAPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D+++EEL  A Q+ G V+PI       +   I++D K  KAFA LR+ R N RL G+
Sbjct: 138 DSTEEELKMATQLSGAVMPIKNVHKKEKARVISEDEKNFKAFASLRMARANARLFGI 194



 Score = 83.6 bits (205), Expect(2) = 8e-41
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ+ VRTWFNQP                I PRP +GPLRP V   T++Y+ KVRAGRG
Sbjct: 16  KDWQTRVRTWFNQPARKTRRRKARQIKARRIAPRPVAGPLRPQVRCPTIRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85


>tr|Q0GN70|Q0GN70_DICLA 60S ribosomal protein L13 OS=Dicentrarchus
           labrax PE=2 SV=1
          Length = 207

 Score =  107 bits (266), Expect(2) = 1e-40
 Identities = 57/117 (48%), Positives = 77/117 (65%)
 Frame = +1

Query: 187 LGRVEGGGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRRSKKTKAG 366
           L  ++  GI  K A TIGI+VD RR+NR  ESLQ+NVQRL  Y++KLI+FPR++   K G
Sbjct: 78  LEELKAAGIHKKTARTIGISVDSRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKG 137

Query: 367 DASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKRLMGV 537
           D+++EEL  A Q+ G V+PI       +   I++D K  KAFA LR+ R N RL G+
Sbjct: 138 DSTEEELKMATQLAGQVMPIKTVHKKEKARVISEDEKNFKAFASLRMARANARLFGI 194



 Score = 83.2 bits (204), Expect(2) = 1e-40
 Identities = 40/70 (57%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   KDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKVRAGRG 181
           KDWQ  VRTWFNQP                I PRP +GPLRP V   T++Y+ KVRAGRG
Sbjct: 16  KDWQKRVRTWFNQPARKIRRRKARQAKARLIAPRPVAGPLRPQVRCPTIRYHTKVRAGRG 75

Query: 182 FTLEELKVAG 211
           FTLEELK AG
Sbjct: 76  FTLEELKAAG 85