Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963571|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_O08, 5' (665 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 270 7e-72 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 253 5e-67 sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 105 2e-22 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 104 4e-22 sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 103 8e-22 sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 103 8e-22 sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 102 2e-21 sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 99 2e-20 sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 98 4e-20 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 95 3e-19 sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 94 5e-19 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 93 1e-18 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 92 2e-18 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 92 2e-18 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 92 3e-18 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 92 3e-18 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 92 3e-18 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 91 4e-18 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 91 5e-18 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 91 5e-18 sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 91 7e-18 sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 90 9e-18 sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 90 1e-17 sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 90 1e-17 sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 90 1e-17 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 89 2e-17 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 89 2e-17 sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 89 2e-17 sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ... 89 3e-17 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 89 3e-17
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 270 bits (689), Expect = 7e-72 Identities = 134/204 (65%), Positives = 147/204 (72%) Frame = +2
Query: 50 SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 229 SA VPSL P +RS G P A+ + R++MSAEW PGQPRPAHLDGSSPGDFG Sbjct: 11 SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 67
Query: 230 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 409 FDPLGLA VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA P GQAT Sbjct: 68 FDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQAT 127
Query: 410 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 589 YLGNPVPWGNLP QR EKDPEK+KYPGG FDPLGFSK+P Sbjct: 128 YLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEEL 187
Query: 590 XXXXXXNGRLALLAFVGFSVQAAA 661 NGRLA+LAFVGF VQ +A Sbjct: 188 KLKEIKNGRLAMLAFVGFCVQQSA 211
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 253 bits (647), Expect = 5e-67 Identities = 130/214 (60%), Positives = 151/214 (70%), Gaps = 2/214 (0%) Frame = +2
Query: 26 MATSTVASSA--QLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 199 MA++T+ S + PS L T+SKF + GA T+ SR SMSA+W+PGQPRP++ Sbjct: 1 MASNTLMSCGIPAVCPSF-LSSTKSKFAAAMPVYVGA-TNFMSRFSMSADWMPGQPRPSY 58
Query: 200 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 379 LDGS+PGDFGFD LGL EVP N ERYKESELIHCRWAMLAVPG+++PEALGLGNWV AQ+ Sbjct: 59 LDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQE 118
Query: 380 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 559 WAA PGGQATYLG PVPWG LP QR+ EKD EK+KYPGG FDPLG+ Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGY 178
Query: 560 SKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 SK+P NGRLALLA VGF VQ +A Sbjct: 179 SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSA 212
Score = 35.0 bits (79), Expect = 0.36 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +2
Query: 230 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLG 358 FDPLG ++ P FE K E+ + R A+LA+ G + ++ LG Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1 Length = 287
Score = 105 bits (262), Expect = 2e-22 Identities = 80/260 (30%), Positives = 112/260 (43%), Gaps = 49/260 (18%) Frame = +2
Query: 29 ATSTVASSAQLVPSL---SLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAE--WLPGQPRP 193 ATST A+++ ++ + + S+F F + ++ +S W PG P Sbjct: 3 ATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKSP 62
Query: 194 AHLDGSSPGDFGFDPLGLAEVPE------------------------------------- 262 +LDGS GD+GFDP GL + E Sbjct: 63 EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 122
Query: 263 ------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQATYLGNP 424 +R++E ELIH RWAMLA G + E L W DA K G ++YLG P Sbjct: 123 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQP 180
Query: 425 VPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGP-FDPLGFSKNPXXXXXXXXXX 601 +P+ ++ QRN E D EKR YPGG FDPLG + +P Sbjct: 181 LPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAE 239
Query: 602 XXNGRLALLAFVGFSVQAAA 661 + RLA++ F+GF+VQAAA Sbjct: 240 IKHARLAMVGFLGFAVQAAA 259
Score = 33.1 bits (74), Expect = 1.4 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Frame = +2
Query: 188 RPAHLDGSS---PGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL--- 349 R A LD PG FDPLGLA P + + +E+ H R AM+ G + A Sbjct: 203 RNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGK 262
Query: 350 -GLGNW 364 L NW Sbjct: 263 GPLNNW 268
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1 Length = 280
Score = 104 bits (260), Expect = 4e-22 Identities = 59/162 (36%), Positives = 78/162 (48%), Gaps = 7/162 (4%) Frame = +2
Query: 191 PAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL--GNW 364 P +L+G GD+G+DP GL + PENF +Y+ ELIH RWAML G ++PEAL N Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 365 VDAQKWAAT-----PGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKY 529 W T G Y G +P + + D E + + Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLH 201
Query: 530 PGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQA 655 PGGPFDPLG +K+P NGRLA+ A +GF +QA Sbjct: 202 PGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQA 243
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2 SV=1 Length = 290
Score = 103 bits (257), Expect = 8e-22 Identities = 73/208 (35%), Positives = 91/208 (43%), Gaps = 44/208 (21%) Frame = +2
Query: 170 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 262 W PG P LDGS GD+GFDP GL + E Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117
Query: 263 --------------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGG 400 +R++E ELIH RWAMLA G L E L W DA K G Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG- 176
Query: 401 QATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGP-FDPLGFSKNPXX 577 ++YLG P+P+ ++ QRN E D EKR YPGG FDPLG + +P Sbjct: 177 -SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEK 234
Query: 578 XXXXXXXXXXNGRLALLAFVGFSVQAAA 661 + RLA++AF+GF+VQAAA Sbjct: 235 TAQLQLAEIKHARLAMVAFLGFAVQAAA 262
Score = 37.4 bits (85), Expect = 0.072 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +2
Query: 188 RPAHLDGSS---PGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL--- 349 R A LD PG FDPLGLA PE + + +E+ H R AM+A G + A Sbjct: 206 RNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGK 265
Query: 350 -GLGNW 364 L NW Sbjct: 266 GPLNNW 271
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1 Length = 252
Score = 103 bits (257), Expect = 8e-22 Identities = 78/230 (33%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Frame = +2
Query: 26 MATSTVASSAQLVPSLSLPLTRSKFLGSP--------AFTPGAFTSNGSRL--SMSAEWL 175 MAT T +SA + L +S+FLG AF P + + S + EWL Sbjct: 1 MATVTTQASAAIFGPCGL---KSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWL 57
Query: 176 PGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL 355 PG P +L GS PGD GFDPLGLAE PEN + ++EL++ RWAML V G+LLPE Sbjct: 58 PGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTS 117
Query: 356 GNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQR--NYEKDPEKRK- 526 ++ KW A G+ Y + + + + +DP ++ Sbjct: 118 IGIINVPKWYA--AGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQY 175
Query: 527 --------YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQ 652 YPGG F+PL F+ NGRLA+LAF+GF +Q Sbjct: 176 SLPAGEVGYPGGIFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFIIQ 221
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2 SV=1 Length = 276
Score = 102 bits (254), Expect = 2e-21 Identities = 71/206 (34%), Positives = 89/206 (43%), Gaps = 43/206 (20%) Frame = +2
Query: 170 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 262 W PG P LDGS GD GFDP GL + E Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118
Query: 263 --------------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGG 400 +R++E ELIH RWAML G + EAL W DA K G Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177
Query: 401 QATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXX 580 ++YLG P+P+ +L QRN E DPEKR YPGG FDPLG + +P Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 235
Query: 581 XXXXXXXXXNGRLALLAFVGFSVQAA 658 + RLA++AF+ F++QAA Sbjct: 236 DTLKLAEIKHSRLAMVAFLIFALQAA 261
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1 Length = 231
Score = 99.4 bits (246), Expect = 2e-20 Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 14/175 (8%) Frame = +2
Query: 170 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL 349 WLPG PA+LDGS GD GFDPL LAE PE+ + ++++++ RWAML V G+L+PE L Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95
Query: 350 GLGNWVDAQKWAATPGGQATYLGNPVP--------------WGNLPXXXXXXXXXXXXXX 487 ++A +W PG + + + W ++ Sbjct: 96 TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIF--- 152
Query: 488 XQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQ 652 ++Y P + YPG F+PL F+ NGRLA+LAF+GF VQ Sbjct: 153 --KSYSLPPHECGYPGRVFNPLNFA-----PLENKEKELANGRLAMLAFLGFLVQ 200
>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1 Length = 251
Score = 97.8 bits (242), Expect = 4e-20 Identities = 77/226 (34%), Positives = 104/226 (46%), Gaps = 17/226 (7%) Frame = +2
Query: 26 MATSTVASSAQLV-PSLSLP--LTRS-----KFLGSPAFTPGAFTSNGSRLSMSAEWLPG 181 MAT T +SA + P S P LT S + L + A TS+ + EWLPG Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60
Query: 182 QPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA----- 346 P +L GS GD GFDPLGLAE PEN + + ++EL++ RWAML V G+LLPE Sbjct: 61 LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
Query: 347 -LGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQ---RNYEKDP 514 + + W DA K ++ + + + + Y Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180
Query: 515 EKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQ 652 + YPGG F+PL F+ NGRLA+LAF+GF VQ Sbjct: 181 GEVGYPGGIFNPLNFAPT----QEAKEKELANGRLAMLAFLGFVVQ 222
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1 Length = 266
Score = 95.1 bits (235), Expect = 3e-19 Identities = 75/235 (31%), Positives = 98/235 (41%), Gaps = 26/235 (11%) Frame = +2
Query: 29 ATSTVASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEW-----------L 175 AT+ SS+ L S +G + ++S S+ W L Sbjct: 3 ATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPL 62
Query: 176 PGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL-- 349 G+P P++L G PGD+G+D GL+ PE F + +E E+IHCRWAML G + PE L Sbjct: 63 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 350 -----GLGNWVDAQKWAATPGGQATYLGNP--VPWGNLPXXXXXXXXXXXXXXXQR---- 496 G W A + GG YLGNP V +L R Sbjct: 122 NGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGG 180
Query: 497 --NYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQA 655 DP YPGG FDPLG ++ P NGRLA+ + GF VQA Sbjct: 181 PLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQA 232
Score = 34.3 bits (77), Expect = 0.61 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +2
Query: 173 LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL- 349 + G P +D PG FDPLGLAE P+ F K E+ + R AM ++ G + + Sbjct: 177 IAGGPLGEIVDPLYPGG-SFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 350 GLGNWVDAQKWAATPGGQATYL 415 G G D A P +L Sbjct: 236 GKGPLEDLADHIADPVNNNAWL 257
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963571|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_O08, 5' (665 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ... 269 1e-70 tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs... 269 1e-70 tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 267 4e-70 tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza... 266 7e-70 tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote... 266 1e-69 tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea... 266 1e-69 tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea... 265 2e-69 tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 264 4e-69 tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl... 263 6e-69 tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea... 262 1e-68 tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g... 261 2e-68 tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei... 261 4e-68 tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic... 260 6e-68 tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis... 259 1e-67 tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten... 258 2e-67 tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O... 258 3e-67 tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (... 257 4e-67 tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul... 257 4e-67 tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten... 243 1e-62 tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar... 239 1e-61 tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F... 219 2e-55 tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys... 201 4e-50 tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar... 200 6e-50 tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F... 199 1e-49 tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar... 196 1e-48 tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ... 153 8e-36 tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O... 140 7e-32 tr|Q7DM26|Q7DM26_CHLRE Light harvesting complex protein I-20 OS=... 139 1e-31 tr|Q05093|Q05093_CHLRE Light harvesting complex I protein (Light... 139 1e-31
>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza sativa GN=Cab26 PE=2 SV=1 Length = 241
Score = 269 bits (687), Expect = 1e-70 Identities = 139/213 (65%), Positives = 155/213 (72%), Gaps = 1/213 (0%) Frame = +2
Query: 26 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 202 MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 203 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 382 DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 383 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 562 AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 563 KNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 K+P NGRLA+LAFVGF VQ +A Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSA 208
>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp. japonica GN=P0578B12.4 PE=2 SV=1 Length = 241
Score = 269 bits (687), Expect = 1e-70 Identities = 139/213 (65%), Positives = 155/213 (72%), Gaps = 1/213 (0%) Frame = +2
Query: 26 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 202 MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 203 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 382 DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 383 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 562 AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 563 KNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 K+P NGRLA+LAFVGF VQ +A Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSA 208
>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea mays PE=2 SV=1 Length = 245
Score = 267 bits (683), Expect = 4e-70 Identities = 139/215 (64%), Positives = 155/215 (72%), Gaps = 2/215 (0%) Frame = +2
Query: 23 VMATSTV--ASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPA 196 VMA+S+ + SA VPSL P +RS L F A TS R++MSAEW+PGQPRPA Sbjct: 2 VMASSSGLRSCSAVGVPSLLAPSSRSGRLAP--FCANATTSG--RVTMSAEWMPGQPRPA 57
Query: 197 HLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQ 376 HLDGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ Sbjct: 58 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKAQ 117
Query: 377 KWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLG 556 +WAA PGGQATYLG PVPWG LP QR EKDPEK+KYPGG FDPLG Sbjct: 118 EWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 177
Query: 557 FSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 FSK+P NGRLA+LAFVGF VQ +A Sbjct: 178 FSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSA 212
>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22755 PE=4 SV=1 Length = 241
Score = 266 bits (681), Expect = 7e-70 Identities = 138/213 (64%), Positives = 154/213 (72%), Gaps = 1/213 (0%) Frame = +2
Query: 26 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 202 MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 203 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 382 DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 383 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 562 AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 563 KNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 K+P NGRLA+LAFV F VQ +A Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSA 208
>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1 Length = 246
Score = 266 bits (679), Expect = 1e-69 Identities = 132/204 (64%), Positives = 145/204 (71%) Frame = +2
Query: 50 SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 229 SA VPSL P +RS G P A+ + R++MSAEW PGQPRPAHLDGSSPGDFG Sbjct: 13 SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 69
Query: 230 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 409 FDPLGL VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA PGGQAT Sbjct: 70 FDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAAVPGGQAT 129
Query: 410 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 589 Y G PVPWGNLP QR EKDPEK+KYPGG FDPLGFSK+P Sbjct: 130 YFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKLEEY 189
Query: 590 XXXXXXNGRLALLAFVGFSVQAAA 661 NGRLA+LAFVGF VQ +A Sbjct: 190 KLKEIKNGRLAMLAFVGFCVQQSA 213
>tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 247
Score = 266 bits (679), Expect = 1e-69 Identities = 132/191 (69%), Positives = 142/191 (74%) Frame = +2
Query: 89 RSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENF 268 +S+F SP + NGSR+SMSAEW+PGQPRPAHLDGS+PGDFGFDPLGL VPEN Sbjct: 24 KSRFF-SPTNSLSLGVCNGSRVSMSAEWMPGQPRPAHLDGSAPGDFGFDPLGLGVVPENL 82
Query: 269 ERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPX 448 ERYKESELIHCRWAMLAVPGVL+PEALGLGNWV+AQKWAA PGGQATYLG PVPWG P Sbjct: 83 ERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQKWAAIPGGQATYLGVPVPWGYFPI 142
Query: 449 XXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALL 628 QRN E D EKRKYPGG FDPLGFSK+P NGRLALL Sbjct: 143 ILSIFFLKMAFAESQRNGEPDLEKRKYPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALL 202
Query: 629 AFVGFSVQAAA 661 AFVGF VQA+A Sbjct: 203 AFVGFCVQASA 213
>tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 247
Score = 265 bits (676), Expect = 2e-69 Identities = 137/214 (64%), Positives = 151/214 (70%), Gaps = 2/214 (0%) Frame = +2
Query: 26 MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 199 MAT+ S A +V + + +S+F SP + NGSR+SMSAEW+PGQPRP H Sbjct: 1 MATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSMSAEWMPGQPRPPH 59
Query: 200 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 379 LDGS+PGDFGFDPL L VPEN ERYKESELIHCRWAMLAVPGVL+PEALGLGNWV+AQK Sbjct: 60 LDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQK 119
Query: 380 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 559 WAA PG QATYLG PVPWG LP QRN E DPEKRKYPGG FDPLGF Sbjct: 120 WAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLGF 179
Query: 560 SKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 SK+P NGRLALLAFVGF VQA+A Sbjct: 180 SKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASA 213
>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea mays PE=2 SV=1 Length = 249
Score = 264 bits (674), Expect = 4e-69 Identities = 135/205 (65%), Positives = 147/205 (71%), Gaps = 1/205 (0%) Frame = +2
Query: 50 SAQLVPSLSLPLTRSKFL-GSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDF 226 SA VPSL P T S G F A TS R++MSAEW+PGQPRPAHLDGSSPGDF Sbjct: 14 SALGVPSLLAPSTSSSSRSGRLPFCAHATTSG--RVTMSAEWMPGQPRPAHLDGSSPGDF 71
Query: 227 GFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQA 406 GFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+WAA PGGQA Sbjct: 72 GFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVKAQEWAAVPGGQA 131
Query: 407 TYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXX 586 TYLG PVPWG LP QR EKDPEK+KYPGG FDPLGFS++P Sbjct: 132 TYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSRDPAKLEE 191
Query: 587 XXXXXXXNGRLALLAFVGFSVQAAA 661 NGRLA+LAFVGF VQ +A Sbjct: 192 YKLKEIKNGRLAMLAFVGFCVQQSA 216
>tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyll a/b-binding protein OS=Nicotiana tabacum GN=LHCI PE=2 SV=1 Length = 245
Score = 263 bits (673), Expect = 6e-69 Identities = 135/214 (63%), Positives = 154/214 (71%), Gaps = 2/214 (0%) Frame = +2
Query: 26 MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 199 MA++T+ S A + PS+ L + SKF + GA + N SR SMSAEW+PGQPRP + Sbjct: 1 MASNTLMSCGIAAVSPSV-LSSSYSKFAVAVPVCVGAVSGN-SRFSMSAEWMPGQPRPPY 58
Query: 200 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 379 LDGS+PGDFGFDPLGL EVP N ERYKESELIHCRWAMLAVPG+L+PEALGLGNWV AQ+ Sbjct: 59 LDGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 118
Query: 380 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 559 WAA PGGQATYLG PVPWG LP QR+ EKDPEK+KYPGG FDPLG+ Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 178
Query: 560 SKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 SK+P NGRLALLAFVGF VQ +A Sbjct: 179 SKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSA 212
>tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 247
Score = 262 bits (670), Expect = 1e-68 Identities = 136/214 (63%), Positives = 150/214 (70%), Gaps = 2/214 (0%) Frame = +2
Query: 26 MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 199 MAT+ S A +V + + +S+F SP + NGSR+SMS EW+PGQPRP H Sbjct: 1 MATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSMSDEWMPGQPRPPH 59
Query: 200 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 379 LDGS+PGDFGFDPL L VPEN ERYKESELIHCRWAMLAVPGVL+PEALGLGNWV+AQK Sbjct: 60 LDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQK 119
Query: 380 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 559 WAA PG QATYLG PVPWG LP QRN E DPEKRKYPGG FDPLGF Sbjct: 120 WAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLGF 179
Query: 560 SKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAA 661 SK+P NGRLALLAFVGF VQA+A Sbjct: 180 SKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASA 213
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