DK963586 |
Clone id |
TST39A01NGRL0016_O23 |
Library |
TST39 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_O23. 5' end sequence. |
Accession |
DK963586 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
CTCGAGATCATCATCTTTTCGCAGGGGAAAGAGAAAGCTTGGTTGCAGAGACCGTCGGGA CGCCATGGCTGCAGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCCTCTCTGC CCACTCCTCCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCGCCAAATT CTCGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAA GAGAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCC CCCCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGT TGATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGAT GGGCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAA TCGCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCA TCTTGCCGGCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAGAG CCGAACTCCTGGGCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
165 |
Score (bit) |
237.0 |
E-value |
4.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963586|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_O23, 5' (655 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 237 4e-62 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 233 5e-61 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 230 4e-60 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 219 1e-56 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 201 3e-51 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 191 2e-48 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 153 7e-37 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 149 1e-35 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 149 1e-35 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 149 2e-35 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 145 2e-34 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 143 9e-34 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 142 1e-33 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 142 1e-33 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 142 1e-33 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 142 2e-33 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 142 2e-33 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 140 4e-33 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 140 4e-33 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 140 4e-33 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 140 6e-33 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 139 1e-32 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 137 5e-32 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 136 1e-31 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 136 1e-31
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 237 bits (605), Expect = 4e-62 Identities = 116/165 (70%), Positives = 130/165 (78%) Frame = +2
Query: 161 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 340 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 341 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 520 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 521 LQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 LQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTT Sbjct: 147 LQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTT 191
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 233 bits (595), Expect = 5e-61 Identities = 105/112 (93%), Positives = 111/112 (99%) Frame = +2
Query: 320 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 499 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 500 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTT Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTT 126
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 230 bits (587), Expect = 4e-60 Identities = 108/117 (92%), Positives = 111/117 (94%), Gaps = 1/117 (0%) Frame = +2
Query: 308 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 484 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 485 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTT Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTT 191
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 219 bits (558), Expect = 1e-56 Identities = 98/112 (87%), Positives = 105/112 (93%) Frame = +2
Query: 320 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 499 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 500 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTT Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTT 124
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 201 bits (511), Expect = 3e-51 Identities = 90/112 (80%), Positives = 99/112 (88%) Frame = +2
Query: 320 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 499 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 500 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTT Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTT 128
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 191 bits (486), Expect = 2e-48 Identities = 90/113 (79%), Positives = 97/113 (85%) Frame = +2
Query: 317 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 496 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 497 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTT Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTT 119
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 153 bits (387), Expect = 7e-37 Identities = 71/108 (65%), Positives = 85/108 (78%) Frame = +2
Query: 332 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 511 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 512 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TT Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATT 115
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 149 bits (376), Expect = 1e-35 Identities = 66/110 (60%), Positives = 87/110 (79%) Frame = +2
Query: 326 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 505 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 506 GHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 GHG ML Y++LHLAGY+ V +++K+FRQ S TPGHPENF T G+E TT Sbjct: 73 GHGSMLLYSVLHLAGYEKVTIDEIKRFRQLGSLTPGHPENFVTEGIETTT 122
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 149 bits (376), Expect = 1e-35 Identities = 69/113 (61%), Positives = 88/113 (77%) Frame = +2
Query: 317 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 496 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 497 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TT Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATT 114
>sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1 Length = 689
Score = 149 bits (375), Expect = 2e-35 Identities = 71/116 (61%), Positives = 88/116 (75%) Frame = +2
Query: 308 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 487 T + E INTIRFL+VD VE+A SGHPG+P+G + + ++LYD IM+YNPKNP WFNRD Sbjct: 29 TSKKIDELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRD 88
Query: 488 RFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTT 655 RF+LSAGHG + YA ++ G+D + EDLK FRQ S+TPGHPE TPGVEVTT Sbjct: 89 RFILSAGHGSAMLYAAFYMFGFD-LTLEDLKAFRQLNSKTPGHPEYGLTPGVEVTT 143
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
159 |
Score (bit) |
241.0 |
E-value |
2.0e-62 |
Report |
|