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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963594
Clone id TST39A01NGRL0016_P07
Library
Length 670
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_P07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTGTTCTGATCTGCAGGTGTTCAATAAAGTGCTGTCATAGTTCCTTAAATAGCTGGAAA
TGGCGCAAATACAGACAGGGTTATGCATTCAGCAGCCTATACAGCTCTAAAGCAGCTTTA
CGTTGATCATCCTATTTTGCTTTAACCTTTTCTTGATCTTGCGTTGATTTGCGTGATGTC
CTGTCTGCTTCTGAAGACAAGTGGTAATTTGGAAAAAGAGGTCGTTAAAGCTACACATGA
AGAAGTTCTTGGTGAGATAAATTATGAACAAATACTCCAAGGGTGTTCTTGCTGGCCTAT
ATCAGACCAACCTTCCTGCGTGGTTCATGGAGATTGCAGGGAAGGGGGTGGTTGGGAAGA
GTCTGCTGTAAGGTCTGCGGATTTACAGCCTGGCATTTGTAGTTCCATAAAAGAAGAGCT
ACAGACTGGCATATTTCCTGCTAAGAATGATCACCAAGAAATCTTGGAGAGCAGGAATAT
ATTGACAAAACCTGAATGTAACCGAGAGCAGCAGCTAGCGTGGCAGGAATATATTGTGGA
TGAGCTGGTGTGCAAGTTGATCTCACAGTTGCAGTTTCCTCCAGAGTCGTGCTCCCAGAA
GAGAGAGGTCCAGGAGCTCAATAATCAGAAAGGTGATATACAAGGTGGCAAAGTCCCGGC
ATCTAGTGTG
■■Homology search results ■■ -
sp_hit_id Q90631
Definition sp|Q90631|KTN1_CHICK Kinectin OS=Gallus gallus
Align length 50
Score (bit) 31.2
E-value 5.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963594|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_P07, 5'
         (670 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q90631|KTN1_CHICK Kinectin OS=Gallus gallus GN=KTN1 PE=1 SV=1       31   5.2  
sp|A1L1J6|ZN652_RAT Zinc finger protein 652 OS=Rattus norvegicus...    31   6.8  
sp|Q5RA03|SHOT1_PONAB Shootin-1 OS=Pongo abelii PE=2 SV=2              31   6.8  
sp|A0MZ66|SHOT1_HUMAN Shootin-1 OS=Homo sapiens GN=KIAA1598 PE=1...    31   6.8  
sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1...    30   8.8  
sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor type 6 OS=Mus musc...    30   8.8  
sp|Q29RT6|KI20A_BOVIN Kinesin-like protein KIF20A OS=Bos taurus ...    30   8.8  

>sp|Q90631|KTN1_CHICK Kinectin OS=Gallus gallus GN=KTN1 PE=1 SV=1
          Length = 1364

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 515 LAWQEYIVDELVCKLISQLQFPPESCSQKREVQELNNQKGDIQGGKVPAS 664
           L  +E + DE++ K    L+FPP   S K++ ++  N+K + Q G +  S
Sbjct: 27  LFMKETLYDEVLAKQKRDLKFPPTK-SDKKKTEKKKNKKKEAQNGNIHES 75


>sp|A1L1J6|ZN652_RAT Zinc finger protein 652 OS=Rattus norvegicus
           GN=Znf652 PE=2 SV=1
          Length = 608

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 355 PTTPFPAISMNHAGRLV*YRPARTPLEYLFI 263
           PT+P PA+SMN  G  +  RP   P  +L I
Sbjct: 522 PTSPAPAVSMNPVGSALPSRPVPHPFSHLHI 552


>sp|Q5RA03|SHOT1_PONAB Shootin-1 OS=Pongo abelii PE=2 SV=2
          Length = 456

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 452 HQEILESRNILTKPECNREQQLAWQEYIVDELVCKLISQLQFPPESCSQKREVQE 616
           + E+LE R +L K  CNR   LA +EY   ++  +L   L+   ES +Q+  +++
Sbjct: 190 NSEVLEQRKVLEK--CNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQ 242


>sp|A0MZ66|SHOT1_HUMAN Shootin-1 OS=Homo sapiens GN=KIAA1598 PE=1
           SV=4
          Length = 631

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 452 HQEILESRNILTKPECNREQQLAWQEYIVDELVCKLISQLQFPPESCSQKREVQE 616
           + E+LE R +L K  CNR   LA +EY   ++  +L   L+   ES +Q+  +++
Sbjct: 190 NSEVLEQRKVLEK--CNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQ 242


>sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1
           SV=1
          Length = 631

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 452 HQEILESRNILTKPECNREQQLAWQEYIVDELVCKLISQLQFPPESCSQKREVQE 616
           + E+LE R +L K  CNR   LA +EY   ++  +L   L+   ES +Q+  +++
Sbjct: 190 NSEVLEQRKVLEK--CNRVSMLAVEEYEELQVNLELEKDLRKKAESFAQEMFIEQ 242


>sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor type 6 OS=Mus
           musculus GN=Npy6r PE=2 SV=1
          Length = 371

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -1

Query: 217 FFQITTCLQKQTGHHANQRKIKKRLKQNRMINVKLL 110
           + +I  CL+K+T     +++ K RL +N+ +NV L+
Sbjct: 229 YLKIVLCLRKRTRQVDRRKENKSRLNENKRVNVMLI 264


>sp|Q29RT6|KI20A_BOVIN Kinesin-like protein KIF20A OS=Bos taurus
           GN=KIF20A PE=2 SV=1
          Length = 888

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 18/80 (22%), Positives = 41/80 (51%)
 Frame = +2

Query: 377 ADLQPGICSSIKEELQTGIFPAKNDHQEILESRNILTKPECNREQQLAWQEYIVDELVCK 556
           A   PG+   I+ E+    +  K +  +++E+   L   E  R+++L  +  + DE+  +
Sbjct: 538 AKTDPGLGDDIENEVDISTY-GKEELLQVVEAMKALLLKE--RQEKLRLEVQLRDEICNE 594

Query: 557 LISQLQFPPESCSQKREVQE 616
           ++ Q+Q   + CS+  + Q+
Sbjct: 595 MVEQMQQREQWCSEHLDTQK 614
tr_hit_id A2Q136
Definition tr|A2Q136|A2Q136_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 126
Score (bit) 35.4
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963594|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_P07, 5'
         (670 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2Q136|A2Q136_MEDTR Putative uncharacterized protein OS=Medic...    35   3.3  
tr|B0DE10|B0DE10_LACBS Predicted protein OS=Laccaria bicolor (st...    35   4.3  
tr|Q4P7F0|Q4P7F0_USTMA Putative uncharacterized protein OS=Ustil...    35   5.5  
tr|Q4DZQ3|Q4DZQ3_TRYCR Putative uncharacterized protein OS=Trypa...    35   5.6  
tr|A0D1Q4|A0D1Q4_PARTE Chromosome undetermined scaffold_34, whol...    35   5.6  
tr|Q2HA07|Q2HA07_CHAGB Putative uncharacterized protein OS=Chaet...    34   7.2  
tr|Q0C801|Q0C801_ASPTN Predicted protein OS=Aspergillus terreus ...    34   7.2  
tr|B0YJE5|B0YJE5_PAEPO Acetolactate synthase large subunit OS=Pa...    34   7.3  
tr|Q4Q553|Q4Q553_LEIMA Putative uncharacterized protein OS=Leish...    34   9.5  
tr|A0CUU2|A0CUU2_PARTE Chromosome undetermined scaffold_282, who...    34   9.5  

>tr|A2Q136|A2Q136_MEDTR Putative uncharacterized protein OS=Medicago
            truncatula GN=MtrDRAFT_AC147481g41v2 PE=4 SV=1
          Length = 1535

 Score = 35.4 bits (80), Expect = 3.3
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
 Frame = +2

Query: 179  SCLLLKT-SGNLEKEVVKATHEEVLGEINYEQILQGCSCWPISDQP--------SCVVHG 331
            SC++    + +LEKE ++A  +E        ++  G  C  + ++P        SC    
Sbjct: 1012 SCMMDNVEAASLEKESLRAICQEKANVGTLPELNDGSEC--VDNKPHQKFLSSASCNEES 1069

Query: 332  DCREGGGWEESAVRSADLQPGICSSI-KEELQTGIFPAKNDHQEILESRN---ILTKPEC 499
               +G       V++A L+     ++ +E+   G FPA ND  E ++S+N   +L    C
Sbjct: 1070 SHTKGSSCMVDNVKAASLKTESLHALCQEKANAGTFPALNDGSECVDSKNDQKVLFSASC 1129

Query: 500  NREQQL 517
            N +  L
Sbjct: 1130 NEDSCL 1135


>tr|B0DE10|B0DE10_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_328189 PE=4 SV=1
          Length = 877

 Score = 35.0 bits (79), Expect = 4.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 263 YEQILQGCSCWPISDQPSCVVHGDCREGGGWEESAVRSADLQP 391
           YE++L    CWP    P+ +   DC + G W+ +    ADLQP
Sbjct: 730 YEELLSVTCCWPGPPTPNGL---DCSKWGSWDANRGPDADLQP 769


>tr|Q4P7F0|Q4P7F0_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM03963.1 PE=4 SV=1
          Length = 1509

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -3

Query: 539 PQYIPATLAAALGYIQVLSIYSCSPRFLGDHS*QEICQSVALLLWNYKCQAVNPQTLQQT 360
           P  +   LA   G+++V  +       LG H+   +  S A LL +  C  V PQT Q T
Sbjct: 195 PDALSRQLAINEGHVRVRDLIQPKSHILGQHTIHILPHSTAKLLPSSACYCVGPQTPQVT 254

Query: 359 LP 354
           +P
Sbjct: 255 VP 256


>tr|Q4DZQ3|Q4DZQ3_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053507711.250 PE=4 SV=1
          Length = 1001

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = +2

Query: 410 KEELQTGIFPAKNDHQEILESRNILTKPECNREQQLAWQEYIVDELV--CKLISQLQFPP 583
           +E++Q  + PA+N  + +  + N+        + Q A Q+  V ELV   + + +L  P 
Sbjct: 621 QEDVQELVAPAENVRELVAPAENVRELVSPTEDVQAARQQEDVQELVAPAENVRELVAPA 680

Query: 584 E---SCSQKREVQELNNQKGDIQGGKVPASSV 670
           E   +  Q+ +VQEL +   D+Q    PA +V
Sbjct: 681 EDVQAAEQQEDVQELVSPAEDVQELVAPAENV 712


>tr|A0D1Q4|A0D1Q4_PARTE Chromosome undetermined scaffold_34, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00012495001 PE=4 SV=1
          Length = 2195

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 23/82 (28%), Positives = 39/82 (47%)
 Frame = +2

Query: 338 REGGGWEESAVRSADLQPGICSSIKEELQTGIFPAKNDHQEILESRNILTKPECNREQQL 517
           +E   +E+ A+    LQ     +I +E  T +     +   +LE++    K   N E+  
Sbjct: 145 QENTYYEDKALLKCPLQT--IHAITKEAATSLIKGDQNLISMLEAKGYQIKRLKNNEEIF 202

Query: 518 AWQEYIVDELVCKLISQLQFPP 583
            +Q Y+V  ++  LI QLQ PP
Sbjct: 203 YYQRYLVSYVLKSLIFQLQLPP 224


>tr|Q2HA07|Q2HA07_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_02947 PE=4 SV=1
          Length = 393

 Score = 34.3 bits (77), Expect = 7.2
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -3

Query: 614 PGPLSSGSTTLEETATVRSTCTPAHPQYIPATLAAA 507
           P P SS STT  +T T   T TPAHP+YI    A A
Sbjct: 29  PKPTSSSSTTTTDTTT---TTTPAHPKYISRREAEA 61


>tr|Q0C801|Q0C801_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_10183 PE=4 SV=1
          Length = 583

 Score = 34.3 bits (77), Expect = 7.2
 Identities = 19/58 (32%), Positives = 24/58 (41%)
 Frame = -3

Query: 593 STTLEETATVRSTCTPAHPQYIPATLAAALGYIQVLSIYSCSPRFLGDHS*QEICQSV 420
           S  L +T  V S C PA P Y P T  + L        +S  P  +GD S    C  +
Sbjct: 96  SGRLIKTVPVASVCYPAEPAYNPETCQSVLSNWTTWPFHSADPASVGDPSLDNSCSPI 153


>tr|B0YJE5|B0YJE5_PAEPO Acetolactate synthase large subunit
           OS=Paenibacillus polymyxa GN=fusD PE=3 SV=1
          Length = 566

 Score = 34.3 bits (77), Expect = 7.3
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +2

Query: 344 GGGWEESAVRSADLQPGICSSIKEELQTGIFPAKNDHQEILESRNILTKPECNREQQLAW 523
           G GW ++ +    L       + E  +TGI   +    E +ES  I +K E   + QLAW
Sbjct: 469 GYGWLQNQMNYKHLTGQSLPFVSEAAKTGI---QIPQYEFVESLAIRSKGEAREQLQLAW 525

Query: 524 QEYIVDELV 550
           Q+Y  ++LV
Sbjct: 526 QKYQENKLV 534


>tr|Q4Q553|Q4Q553_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LmjF32.2220 PE=4 SV=1
          Length = 1389

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 24/99 (24%), Positives = 45/99 (45%)
 Frame = +2

Query: 356 EESAVRSADLQPGICSSIKEELQTGIFPAKNDHQEILESRNILTKPECNREQQLAWQEYI 535
           +E+  R  D Q  +     EE++        DHQ+ L++  +    + NRE +L  Q++ 
Sbjct: 327 QETQARPTDSQAVLTQQTLEEIEA-------DHQQQLQAMKLTIHNQYNRETELLGQQHA 379

Query: 536 VDELVCKLISQLQFPPESCSQKREVQELNNQKGDIQGGK 652
           + + +  L  QLQ    S +++   QE  N   ++   K
Sbjct: 380 MQDSIDDLKRQLQL---SSNRQWVQQERENHLNEMDAAK 415


>tr|A0CUU2|A0CUU2_PARTE Chromosome undetermined scaffold_282, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00039013001 PE=4 SV=1
          Length = 1681

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
 Frame = -2

Query: 582 GGNCNCEINLHTSSSTIY---------SCHASCCSRLHSGFVNIFLLSKISW*SFLAGNM 430
           G +C C+  L  S  T Y         +CH SC S      VN  L    S    L G  
Sbjct: 258 GNSCQCKTKLQGSFLTTYFVESKNQCLNCHYSCLS-CSGPLVNQCLSCLNSEQRTLIGTS 316

Query: 429 PVCSSSFMELQMPGCKSAD 373
            +C++++ +   P CK  D
Sbjct: 317 CICTANYFDNGFPNCKQCD 335