DK963603 |
Clone id |
TST39A01NGRL0016_P17 |
Library |
TST39 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_P17. 5' end sequence. |
Accession |
DK963603 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL444Contig1 |
Sequence |
GCGAGTCCCGAGCCCCGAGTCCCGACCCATTAAGCTTTTACCTGTGAGCTCGGGCAACGA GAAGACGCCTCTCTTTCTCTGTTCTGCCTAACCTGCGCTCGTCAGCCCCACTCCATATCT CCTCTTCTGTGGGCTGTCAGCTGCGATTCTACCCATTCGGTAACCCTGGCTCAGAAGATC GGGAAATCGACTCGCAAGCCTGGTGTTATGTCCAAGGCTCTCGTGTACGCAGATGTGAAT CTAAATCGCCCTAAAGAGTACTGGGACTACGAGTCGCTCGTCGTGCAGTGGGGGGATCAG GAAGATTATGAAGTTGTGAGAAAGGTTGGTCGCGGCAAATACAGCGAGGTTTTTGAAGGA GTGAACACTGTCAACAACGAGCGTTGCATCATAAAAATACTGAAACCAGTGAAGAAGAAG AAGATCAAAAGGGAGATTAAGATTCTACAAAATCTTTGTGGAGGACCTAATATTATCAAG CTATTAGACATTGTCCGGGATCCTCAGTCAAAGACACCAAGCCTGGTTTTTGAATATGTC AATAACACAGATTTCAAGGTCCTTTATCCGACTTTGACAGACTATGATATCCGCTACTAC ATATACGAGCTTCTGAAGGCACTTGATTATTGTCATTCACAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P28523 |
Definition |
sp|P28523|CSK2A_MAIZE Casein kinase II subunit alpha OS=Zea mays |
Align length |
145 |
Score (bit) |
234.0 |
E-value |
4.0e-61 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NVF1 |
Definition |
tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
159 |
Score (bit) |
253.0 |
E-value |
5.0e-66 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963603|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_P17, 5' (642 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea... 253 5e-66 tr|A5AYZ7|A5AYZ7_VITVI Putative uncharacterized protein OS=Vitis... 252 1e-65 tr|A7PLP4|A7PLP4_VITVI Chromosome chr7 scaffold_20, whole genome... 248 2e-64 tr|Q8VX01|Q8VX01_SINAL Casein kinase II alpha subunit OS=Sinapis... 239 8e-62 tr|O64816|O64816_ARATH Putative casein kinase II catalytic (Alph... 239 1e-61 tr|A9THD0|A9THD0_PHYPA Predicted protein OS=Physcomitrella paten... 238 2e-61 tr|B3TLM4|B3TLM4_ELAGV Protein kinase CK2 alpha chain OS=Elaeis ... 235 2e-60 tr|A9T4Y7|A9T4Y7_PHYPA Predicted protein OS=Physcomitrella paten... 234 3e-60 tr|A9T4Y0|A9T4Y0_PHYPA Predicted protein OS=Physcomitrella paten... 234 3e-60 tr|A7NU72|A7NU72_VITVI Chromosome chr18 scaffold_1, whole genome... 234 3e-60 tr|A5ARH3|A5ARH3_VITVI Putative uncharacterized protein OS=Vitis... 234 3e-60 tr|Q9ST47|Q9ST47_MAIZE Protein kinase CK2, alpha subunit OS=Zea ... 234 4e-60 tr|Q9AR27|Q9AR27_ORYSI Casein kinase II alpha subunit OS=Oryza s... 234 4e-60 tr|B8AK92|B8AK92_ORYSI Putative uncharacterized protein OS=Oryza... 234 4e-60 tr|B6F123|B6F123_9ORYZ Casein kinase II alpha subunit OS=Oryza g... 234 4e-60 tr|B6F122|B6F122_9ORYZ Casein kinase II alpha subunit OS=Oryza b... 234 4e-60 tr|B6F121|B6F121_9ORYZ Casein kinase II alpha subunit OS=Oryza a... 234 4e-60 tr|B6F120|B6F120_9ORYZ Casein kinase II alpha subunit OS=Oryza a... 234 4e-60 tr|B6F119|B6F119_9ORYZ Casein kinase II alpha subunit OS=Oryza o... 234 4e-60 tr|B6F117|B6F117_9ORYZ Casein kinase II alpha subunit OS=Oryza m... 234 4e-60 tr|B6F116|B6F116_ORYPU Casein kinase II alpha subunit OS=Oryza p... 234 4e-60 tr|B6F115|B6F115_ORYLO Casein kinase II alpha subunit OS=Oryza l... 234 4e-60 tr|B6F114|B6F114_9ORYZ Casein kinase II alpha subunit OS=Oryza m... 234 4e-60 tr|B6F113|B6F113_9ORYZ Casein kinase II alpha subunit OS=Oryza b... 234 4e-60 tr|B6F111|B6F111_ORYGL Casein kinase II alpha subunit OS=Oryza g... 234 4e-60 tr|B6F108|B6F108_ORYRU Casein kinase II alpha subunit OS=Oryza r... 234 4e-60 tr|B6F107|B6F107_ORYSJ Casein kinase II alpha subunit OS=Oryza s... 234 4e-60 tr|B4FFS6|B4FFS6_MAIZE Putative uncharacterized protein OS=Zea m... 234 4e-60 tr|Q94IG2|Q94IG2_WHEAT Casein kinase II alpha OS=Triticum aestiv... 233 6e-60 tr|Q4W6C1|Q4W6C1_LOLPR Casein protein kinase 2 alpha subunit OS=... 233 6e-60
>tr|A9NVF1|A9NVF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 435
Score = 253 bits (647), Expect = 5e-66 Identities = 123/159 (77%), Positives = 132/159 (83%) Frame = +1
Query: 166 LAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYS 345 LAQKIGKS R+PGV SKA VYADVN+ RPKEYWDYE+L VQWGDQEDYEVVRKVGRGKYS Sbjct: 89 LAQKIGKSIRRPGVTSKARVYADVNVVRPKEYWDYEALTVQWGDQEDYEVVRKVGRGKYS 148
Query: 346 EVFEGVNTVNNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSL 525 EVFEGVN++NNERC LQNL GPNI+KLLDIVRD QSKTPSL Sbjct: 149 EVFEGVNSINNERCIIKILKPVKKKKIKREIKILQNLSEGPNIVKLLDIVRDQQSKTPSL 208
Query: 526 VFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 642 +FEYVNNTDFKVLYPTL+D+DIRYYIYELLKALDYCHSQ Sbjct: 209 IFEYVNNTDFKVLYPTLSDFDIRYYIYELLKALDYCHSQ 247
>tr|A5AYZ7|A5AYZ7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034030 PE=4 SV=1 Length = 392
Score = 252 bits (644), Expect = 1e-65 Identities = 120/160 (75%), Positives = 132/160 (82%) Frame = +1
Query: 163 TLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKY 342 TLAQ+IGKS R+PG SKA VYAD+N+ RPKEYWDYESL VQWG+Q+DYEVVRKVGRGKY Sbjct: 45 TLAQRIGKSVRRPGAPSKARVYADINVIRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKY 104
Query: 343 SEVFEGVNTVNNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPS 522 SEVFEGV+ +NE+C LQNLCGGPNI+KLLDIVRD QSKTPS Sbjct: 105 SEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPS 164
Query: 523 LVFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 642 L+FEYVNNTDFKVLYPTL+DYDIRYYIYELLKALDYCHSQ Sbjct: 165 LIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQ 204
>tr|A7PLP4|A7PLP4_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019650001 PE=4 SV=1 Length = 420
Score = 248 bits (633), Expect = 2e-64 Identities = 120/160 (75%), Positives = 132/160 (82%) Frame = +1
Query: 163 TLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKY 342 TLAQ+IGKS R+PG SKA VYAD+N+ RPKEYWDYESL VQWG+Q+DYEVVRKVGRGKY Sbjct: 77 TLAQRIGKSVRRPGAPSKARVYADINVIRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKY 136
Query: 343 SEVFEGVNTVNNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPS 522 SEVFEGV+ +NE+C LQNLCGGPNI+KLLDIVRD QSKTPS Sbjct: 137 SEVFEGVHCTDNEKCIIKILKPVKKKKIKI----LQNLCGGPNIVKLLDIVRDQQSKTPS 192
Query: 523 LVFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 642 L+FEYVNNTDFKVLYPTL+DYDIRYYIYELLKALDYCHSQ Sbjct: 193 LIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQ 232
>tr|Q8VX01|Q8VX01_SINAL Casein kinase II alpha subunit OS=Sinapis alba GN=cpck2a PE=2 SV=1 Length = 414
Score = 239 bits (611), Expect = 8e-62 Identities = 114/162 (70%), Positives = 130/162 (80%) Frame = +1
Query: 157 SVTLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRG 336 S TLAQKIGKS R+ G SKA VYADVN+ +PK+YWDYESL VQWG Q+DYEVVRKVGRG Sbjct: 63 SETLAQKIGKSIRRAGAPSKARVYADVNVIKPKDYWDYESLAVQWGAQDDYEVVRKVGRG 122
Query: 337 KYSEVFEGVNTVNNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKT 516 KYSEVFEG++ +NE+C LQNLCGGPNI+KLLDIVRD QSKT Sbjct: 123 KYSEVFEGIHATDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKT 182
Query: 517 PSLVFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 642 PSL+FE+VNN DFKVLYPTL+DYD+RYYIYELLKALD+CHS+ Sbjct: 183 PSLIFEHVNNKDFKVLYPTLSDYDVRYYIYELLKALDFCHSR 224
>tr|O64816|O64816_ARATH Putative casein kinase II catalytic (Alpha) subunit OS=Arabidopsis thaliana GN=At2g23070/F21P24.13 PE=2 SV=1 Length = 432
Score = 239 bits (609), Expect = 1e-61 Identities = 114/162 (70%), Positives = 130/162 (80%) Frame = +1
Query: 157 SVTLAQKIGKSTRKPGVMSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRG 336 S TLAQKIGKS R+ G SKA VYADVN+ RPK+YWDYESL VQWG Q+DYEVVRKVGRG Sbjct: 82 SETLAQKIGKSIRRAGAPSKARVYADVNVVRPKDYWDYESLAVQWGVQDDYEVVRKVGRG 141
Query: 337 KYSEVFEGVNTVNNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKT 516 KYSEVFEG++ +NE+C LQNLCGGPNI+KLLDIVRD QSKT Sbjct: 142 KYSEVFEGIHATDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKT 201
Query: 517 PSLVFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 642 PSL+FE+VNN DFKVLYPTL+DYD+RYYI+ELLKALD+CHS+ Sbjct: 202 PSLIFEHVNNKDFKVLYPTLSDYDVRYYIFELLKALDFCHSR 243
>tr|A9THD0|A9THD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145621 PE=4 SV=1 Length = 333
Score = 238 bits (608), Expect = 2e-61 Identities = 115/145 (79%), Positives = 120/145 (82%) Frame = +1
Query: 208 MSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYSEVFEGVNTVNNERC 387 MSKA VY DVN+ RPKEYWDYE+LVVQWGDQ+DYEVVRKVGRGKYSEVFEGVN VNNERC Sbjct: 1 MSKARVYTDVNVQRPKEYWDYEALVVQWGDQDDYEVVRKVGRGKYSEVFEGVNIVNNERC 60
Query: 388 XXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSLVFEYVNNTDFKVLY 567 LQNLCGGPNI+KLLDIVRD QSKTPSLVFEYVNN DFKVLY Sbjct: 61 VIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLVFEYVNNRDFKVLY 120
Query: 568 PTLTDYDIRYYIYELLKALDYCHSQ 642 PTLTDYDIRYYI+ELLKALDYCHSQ Sbjct: 121 PTLTDYDIRYYIHELLKALDYCHSQ 145
>tr|B3TLM4|B3TLM4_ELAGV Protein kinase CK2 alpha chain OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 332
Score = 235 bits (599), Expect = 2e-60 Identities = 110/145 (75%), Positives = 120/145 (82%) Frame = +1
Query: 208 MSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYSEVFEGVNTVNNERC 387 MSKA V+ADVN++RPK+YWDYESL VQWGDQ+DYEVVRKVGRGKYSEVFEG+N NNERC Sbjct: 1 MSKARVHADVNVHRPKDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVANNERC 60
Query: 388 XXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSLVFEYVNNTDFKVLY 567 LQNLCGGPNI+KLLDIVRD SKTPSL+FEYVN+TDFK+LY Sbjct: 61 IIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQNSKTPSLIFEYVNSTDFKILY 120
Query: 568 PTLTDYDIRYYIYELLKALDYCHSQ 642 PTLTDYDIRYYIYELLKALDYCHSQ Sbjct: 121 PTLTDYDIRYYIYELLKALDYCHSQ 145
>tr|A9T4Y7|A9T4Y7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_218940 PE=4 SV=1 Length = 333
Score = 234 bits (598), Expect = 3e-60 Identities = 111/145 (76%), Positives = 120/145 (82%) Frame = +1
Query: 208 MSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYSEVFEGVNTVNNERC 387 MSKA VY DVN+ RPK+YWDYE+L VQWGDQ+DYEVVRKVGRGKYSEVFEGVN VN+ERC Sbjct: 1 MSKARVYTDVNVQRPKDYWDYEALTVQWGDQDDYEVVRKVGRGKYSEVFEGVNAVNSERC 60
Query: 388 XXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSLVFEYVNNTDFKVLY 567 LQNLCGGPNI+KLLDIVRD QSKTPSL+FEYVNNTDFKVLY Sbjct: 61 VMKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLY 120
Query: 568 PTLTDYDIRYYIYELLKALDYCHSQ 642 PTLTD+DIRYYI+ELLKALDYCHSQ Sbjct: 121 PTLTDFDIRYYIHELLKALDYCHSQ 145
>tr|A9T4Y0|A9T4Y0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=CK1a1 PE=4 SV=1 Length = 335
Score = 234 bits (598), Expect = 3e-60 Identities = 110/145 (75%), Positives = 119/145 (82%) Frame = +1
Query: 208 MSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYSEVFEGVNTVNNERC 387 MSKA VY DVN+ RPK+YWDYE+L +QWGDQ+DYEVVRK+GRGKYSEVFEG+NTVNNERC Sbjct: 1 MSKARVYTDVNVQRPKDYWDYEALTIQWGDQDDYEVVRKMGRGKYSEVFEGINTVNNERC 60
Query: 388 XXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSLVFEYVNNTDFKVLY 567 LQNLCGGPNI+KL DIVRD QSKTPSLVFEYVNN DFKVLY Sbjct: 61 VIKILKPVKKKKIKREIKILQNLCGGPNIVKLFDIVRDQQSKTPSLVFEYVNNLDFKVLY 120
Query: 568 PTLTDYDIRYYIYELLKALDYCHSQ 642 PTLTDYDIRYYI+ELLKALDYCHSQ Sbjct: 121 PTLTDYDIRYYIHELLKALDYCHSQ 145
>tr|A7NU72|A7NU72_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014939001 PE=4 SV=1 Length = 333
Score = 234 bits (598), Expect = 3e-60 Identities = 110/145 (75%), Positives = 119/145 (82%) Frame = +1
Query: 208 MSKALVYADVNLNRPKEYWDYESLVVQWGDQEDYEVVRKVGRGKYSEVFEGVNTVNNERC 387 MS A VYADVN++RP++YWDYESL VQWGDQ+DYEVVRKVGRGKYSEVFEG+N NNERC Sbjct: 1 MSSARVYADVNIHRPRDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVTNNERC 60
Query: 388 XXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDPQSKTPSLVFEYVNNTDFKVLY 567 LQNLCGGPNI+KLLDIVRD SKTPSL+FEYVN+TDFKVLY Sbjct: 61 VVKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY 120
Query: 568 PTLTDYDIRYYIYELLKALDYCHSQ 642 PTLTDYDIRYYIYELLKALDYCHSQ Sbjct: 121 PTLTDYDIRYYIYELLKALDYCHSQ 145
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