SRX100887
Experimental ID SRX100887
Genome assembly hg19
Antigen class DNase-seq
Antigen DNase-Seq
Cell type class Others
Cell type Chorion
Cell type description Tissue=fetal membrane|Lineage=extraembryonic mesoderm, trophectoderm|Description=chorion cells (outermost of two fetal membranes), fetal membranes were collected from women who underwent planned cesarean delivery at term, before labor and without rupture of membranes.
Processing logs 140720347, 96.4, 41.1, 40160
Title GSM816628: Duke DnaseSeq Chorion
Meta data source_name=Chorion || biomaterial_provider=Dr. Amy Murtha at Duke University || datatype=DnaseSeq || datatype description=DNaseI HS Sequencing || controlid=generic_female || labversion=baseAlignCounts.pl v 1,p-value cutoff: 0.05,fseq v 1.84, iff_generic_female || replicate=1,2 || cell organism=human || cell description=chorion cells (outermost of two fetal membranes), fetal membranes were collected from women who underwent planned cesarean delivery at term, before labor and without rupture of membranes. || cell karyotype=unknown || cell lineage=extraembryonic mesoderm, trophectoderm || cell sex=U || treatment=None || treatment description=No special treatment or protocol applies || controlid=generic_female || labversion=align_on_cluster_bwa.pl v 1 || replicate=1 || replicate description=tier 1
BigWig SRX100887.bw
Peak-call (BED) (q < 1E-05) SRX100887.05.bed
Peak-call (BED) (q < 1E-10) SRX100887.10.bed
Peak-call (BED) (q < 1E-20) SRX100887.20.bed
Peak-call (BigBed) (q < 1E-05) SRX100887.05.bb
Peak-call (BigBed) (q < 1E-10) SRX100887.10.bb
Peak-call (BigBed) (q < 1E-20) SRX100887.20.bb