SRX142537
Experimental ID SRX142537
Genome assembly mm9
Antigen class TFs and others
Antigen Myod1
Cell type class Muscle
Cell type C2C12
Cell type description Primary Tissue=Skeletal Muscle|Tissue Diagnosis=NOS
Processing logs 35159837, 59.5, 7.4, 19806
Title GSM915186: Caltech ChipSeq C2C12 MyoD (sc-32758) Control 32bp
Meta data source_name=C2C12 || biomaterial_provider=Barbara Wold lab || lab=Caltech-m || lab description=Wold - Califonia Institute of Technology || datatype=ChipSeq || datatype description=Chromatin IP Sequencing || cell=C2C12 || cell organism=mouse || cell description=Myoblast cell line derived from thigh muscle of C3H mice after crush injury || cell sex=F || antibody=MyoD_(sc-32758) || antibody description=mouse monoclonal antibody raised against recombinant MyoD of mouse origin with an epitope mapping to amino acids 180-189. Antibody Target: MyoD || antibody targetdescription=This gene encodes a nuclear protein that belongs to the basic helix-loop-helix family of transcription factors and the myogenic factors subfamily. It regulates muscle cell differentiation by inducing cell cycle arrest, a prerequisite for myogenic initiation. The protein is also involved in muscle regeneration. It activates its own transcription which may stabilize commitment to myogenesis. (provided by RefSeq) || antibody vendorname=Santa Cruz Biotech || antibody vendorid=sc-32758 || control=Control_32bp || control description=This data represents a control being compared to experiments using read length of 32 bp || treatment=None || treatment description=No special treatment or protocol applies || age=immortalized || age description=Immortal cells || control=Control_32bp || control description=This data represents a control being compared to experiments using read length of 32 bp || controlid=10135 || labexpid=10333 || labversion=Myoblast || replicate=1 || strain=C3H || strain description=Strain C3H, Very related to C57BL/6
BigWig SRX142537.bw
Peak-call (BED) (q < 1E-05) SRX142537.05.bed
Peak-call (BED) (q < 1E-10) SRX142537.10.bed
Peak-call (BED) (q < 1E-20) SRX142537.20.bed
Peak-call (BigBed) (q < 1E-05) SRX142537.05.bb
Peak-call (BigBed) (q < 1E-10) SRX142537.10.bb
Peak-call (BigBed) (q < 1E-20) SRX142537.20.bb