SRX201281
Experimental ID SRX201281
Genome assembly hg19
Antigen class DNase-seq
Antigen DNase-Seq
Cell type class Muscle
Cell type LHCN-M2
Cell type description Tissue=skeletal muscle myoblast|Lineage=mesoderm|Description=skeletal myoblasts derived from satellite cells from the pectoralis major muscle of a 41 year old caucasian heart transplant donor, immortalized with lox-hygro-hTERT ("LH"), and Cdk4-neo ("CN"), Zhu et al. (2007) in Aging Cell, vol. 6, pp 515-523, newly promoted to tier 2: not in 2011 analysis.
Processing logs 101998645, 89.3, 63.8, 151327
Title GSM1024771: UW DnaseSeq LHCN-M2 DIFF 4dRep1
Meta data source_name=LHCN-M2 || biomaterial_provider=Dr. Woodring Wright || lab=UW || lab description=Stamatoyannopoulous - University of Washington || datatype=DnaseSeq || datatype description=DNaseI HS Sequencing || cell=LHCN-M2 || cell organism=human || cell description=skeletal myoblasts derived from satellite cells from the pectoralis major muscle of a 41 year old caucasian heart transplant donor, immortalized with lox-hygro-hTERT ("LH"), and Cdk4-neo ("CN"), Zhu et al. (2007) in Aging Cell, vol. 6, pp 515-523, newly promoted to tier 2: not in 2011 analysis. || cell lineage=mesoderm || cell sex=M || treatment=DIFF_4d || treatment description=Myocytes differentiated from myoblasts for 4 days. See specific cell protocol for treatment details. (Stam) || labexpid=DS20647 || labversion=Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75 || replicate=1
BigWig SRX201281.bw
Peak-call (BED) (q < 1E-05) SRX201281.05.bed
Peak-call (BED) (q < 1E-10) SRX201281.10.bed
Peak-call (BED) (q < 1E-20) SRX201281.20.bed
Peak-call (BigBed) (q < 1E-05) SRX201281.05.bb
Peak-call (BigBed) (q < 1E-10) SRX201281.10.bb
Peak-call (BigBed) (q < 1E-20) SRX201281.20.bb