>FC-AC21 (FC-AC21Q) /CSM/FC/FC-AC/FC-AC21Q.Seq.d/
AAGGATAGCTTAGATGTAATCATTTTCCCAGAAATGGTTAAATTGGTTGGATTAACTCCA
AACACTATGGAAAAAGTTTTAACCTATTTCCAAGATAATGATACTATTGATCTTTCAACA
TTCCCAATGGAAATTCAAGTTGAACAATTGAGTGGAAAATATATCTTTATTTGTACTCAT
AAACAAAAAGATCAACGTTGTGGTTATTGTGGTCCAATTTTAGTCGATCAATTAAGAGAT
CAAATTAAAGAAAGATCTTTGGAAAAAGAAATTCAAGTATTTGGTACCTCTCATGTCGGT
GGTCATAAATATGCTGGTAACGTTTTGGTTTTCCCACCAGGTAACTGGTATGGTTATGTA
ACTCCTGATGATGTCTCCTCAATCATTGATTCTACAATCTCTGGTGAAGTCATTCAAAAA
CTTCATCGTGGTACTATGGGTACTGAAATCCCAAAAAAAGAAAAAAAACATTAAAAAAAA
TATTATCATTATAATAAATAAATTTTAAAAAAAAAAATAATTAAAAT

KDSLDVIIFPEMVKLVGLTPNTMEKVLTYFQDNDTIDLSTFPMEIQVEQLSGKYIFICTH
KQKDQRCGYCGPILVDQLRDQIKERSLEKEIQVFGTSHVGGHKYAGNVLVFPPGNWYGYV
TPDDVSSIIDSTISGEVIQKLHRGTMGTEIPKKEKKH*kkyyhynk*ilkkkiik

Frame A:
KDSLDVIIFPEMVKLVGLTPNTMEKVLTYFQDNDTIDLSTFPMEIQVEQLSGKYIFICTH
KQKDQRCGYCGPILVDQLRDQIKERSLEKEIQVFGTSHVGGHKYAGNVLVFPPGNWYGYV
TPDDVSSIIDSTISGEVIQKLHRGTMGTEIPKKEKKH*kkyyhynk*ilkkkiik


Frame B:
ria*m*sfsqkwlnwld*lqtlwkkf*piskimillifqhsqwkfklnn*venislfvli
nkkinvvvivvqf*sin*eiklkkdlwkkkfkylvplmsvvinmlvtfwfshqvtgmvm*
llmmspqslilqslvksfknfivvlwvlksqkkkknikkniiiiinkf*kkk*lk


Frame C:
g*lrcnhfprng*igwinskhygksfnlfpr**yy*sfnipngnss*tiewkiylylys*
tkrstlwllwsnfsrsikrsn*rkifgkrnssiwylscrws*icw*rfgfptr*lvwlcn
s**cllnh*fynlw*shsktsswyygy*npkkrkktlkkilsl**infkkknn*n

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-AC21 (FC-AC21Q) /CSM/FC/FC-AC/FC-AC21Q.Seq.d/                      896   0.0
VFN183 (VFN183Q) /CSM/VF/VFN1-D/VFN183Q.Seq.d/                        884   0.0
VFM566 (VFM566Q) /CSM/VF/VFM5-C/VFM566Q.Seq.d/                        831   0.0
VFJ786 (VFJ786Q) /CSM/VF/VFJ7-D/VFJ786Q.Seq.d/                        801   0.0
VSG625 (VSG625Q) /CSM/VS/VSG6-B/VSG625Q.Seq.d/                        726   0.0
VSE184 (VSE184Q) /CSM/VS/VSE1-D/VSE184Q.Seq.d/                        622   e-177
VFM654 (VFM654Q) /CSM/VF/VFM6-C/VFM654Q.Seq.d/                        523   e-148
SLK711 (SLK711Q) /CSM/SL/SLK7-A/SLK711Q.Seq.d/                         36   0.52
SHD292 (SHD292Q) /CSM/SH/SHD2-D/SHD292Q.Seq.d/                         36   0.52
SHB511 (SHB511Q) /CSM/SH/SHB5-A/SHB511Q.Seq.d/                         36   0.52

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BQ623851|BQ623851.1 USDA-FP_00931 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00931 5', mRNA sequence.    46   6e-05  2
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           36   0.003  17
BH448346|BH448346.1 BOHAP42TR BOHA Brassica oleracea genomic clone BOHAP42, DNA sequence.    48   0.12   1
AA516261|AA516261.1 nf68e06.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:925090 3' similar to gb:M30938 LUPUS KU AUTOANTIGEN PROTEIN P86 (HUMAN);, mRNA sequence.    44   0.13   2
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    30   0.15   13
BX510319|BX510319.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-221E5.    44   0.18   6
AL049185|AL049185.4 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from  MAL13P2.    32   0.24   10
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    32   0.29   12
AC138283|AC138283.1 Homo sapiens chromosome 17 clone RP11-867P20 map 17, LOW-PASS SEQUENCE SAMPLING.    38   0.37   2
CC014781|CC014781.1 PUDJG61TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa224K01, DNA sequence.    46   0.48   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT052503_1(BT052503|pid:none) Medicago truncatula clone MTYFD_FE...   124   1e-27
EU965601_1(EU965601|pid:none) Zea mays clone 287339 sucrose clea...   118   1e-25
BT036152_1(BT036152|pid:none) Zea mays full-length cDNA clone ZM...   118   1e-25
S51376(S51376) sucrose cleavage protein - potato  &S74161_1(S741...   116   4e-25
AY058067_1(AY058067|pid:none) Arabidopsis thaliana AT3g27570/MMJ...   115   5e-25
AB025626_11(AB025626|pid:none) Arabidopsis thaliana genomic DNA,...   115   5e-25
AK317244_1(AK317244|pid:none) Arabidopsis thaliana AT3G27570 mRN...   115   5e-25
AK228503_1(AK228503|pid:none) Arabidopsis thaliana mRNA for sucr...   115   5e-25
AY085366_1(AY085366|pid:none) Arabidopsis thaliana clone 148108 ...   115   7e-25
AY070744_1(AY070744|pid:none) Arabidopsis thaliana AT5g40510/MNF...   115   7e-25

 psg: 0.75  gvh: 0.31  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: mitochondrial
	  8.0 %: peroxisomal
	  4.0 %: vacuolar

>> prediction for FC-AC21 is cyt

>FC-AC21E.Seq
AAGGATAGCTTAGATGTAATCATTTTCCCAGAAATGGTTAAATTGGTTGGATTAACTCCA
AACACTATGGAAAAAGTTTTAACCTATTTCCAAGATAATGATACTATTGATCTTTCAACA
TTCCCAATGGAAATTCAAGTTGAACAATTGAGTGGAAAATATATCTTTATTTGTACTCAT
AAACAAAAAGATCAACGTTGTGGTTATTGTGGTCCAATTTTAGTCGATCAATTAAGAGAT
CAAATTAAAGAAAGATCTTTGGAAAAAGAAATTCAAGTATTTGGTACCTCTCATGTCGGT
GGTCATAAATATGCTGGTAACGTTTTGGTTTTCCCACCAGGTAACTGGTATGGTTATGTA
ACTCCTGATGATGTCTCCTCAATCATTGATTCTACAATCTCTGGTGAAGTCATTCAAAAA
CTTCATCGTGGTACTATGGGTACTGAAATCCCAAAAAAAGAAAAAAAACATTAAAAAAAA
TATTATCATTATAATAAATAAATTTTAAAAAAAAAAATAATTAAAAT