>FC-BB12 (FC-BB12Q) /CSM/FC/FC-BB/FC-BB12Q.Seq.d/
ATTTCACCAGTGAAACTGGTATTCAAAATTACACAGCTGAAGAAGCTGCCAAGATGTCAA
TGAACGATCCAGATTCAGCAACTCGTGATCTCTTTGAAACCATCGCCAAAGGTGGTGAAC
CAGCTTGGAAAGTTTCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCA
ATCCATTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTC
GTATGGTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCT
CACCATCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTC
TCTTCTCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAG
TCAATTGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGG
CTGTCAATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAG
AGCCACATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAAC
CATACAATCATCCAXXXXXXXXXXAATAATATTTTTTTAATTATAATAAAAAATAATAAA
GAAGAAAATTAAAAAAAAATAAAAAAGAAAAATT

FTSETGIQNYTAEEAAKMSMNDPDSATRDLFETIAKGGEPAWKVSIQLMEFEDALKYRFN
PFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRL
FSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPE
PHPEFAQHKFDVSGFAARQPYNHP---

---NNIFLIIIKNNKEEN*kkikkkn

Frame A:
ispvklvfkitqlkklprcq*tiqiqqlvislkpspkvvnqlgkfpfn*wnlkmp*sivs
ihsm*qrfghtktih*fklvvwf*iviqritllklnklpshhptwfqvlnhhqircykvv
ssliqiliviv*v*tinksqsivhsp*rvvlkttnvmvswlsmvmvvkvqtinqtlsvvq
shiqnllninltslvsllvnhtii---

---NNIFLIIIKNNKEEN*kkikkkn

Frame B:
fhq*nwysklhs*rscqdvnersrfsns*sl*nhrqrw*tslesfhsidgi*rclkvsfq
sircnkdlvtqrlsinsnwsygfes*srellc*s*tsclltiphgsry*titr*dvtrss
lllsryssssfrcklstnpsqlsirrkgwc*klpt*wfhgcqw*ww*rsklstklfrwsr
atsricst*i*rlwfrcsstiqss---

---iiff*l**kiikkkikkk*krki

Frame C:
FTSETGIQNYTAEEAAKMSMNDPDSATRDLFETIAKGGEPAWKVSIQLMEFEDALKYRFN
PFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRL
FSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPE
PHPEFAQHKFDVSGFAARQPYNHP---

---*yffnynkk**rrklkknkkek

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-BB12 (FC-BB12Q) /CSM/FC/FC-BB/FC-BB12Q.Seq.d/                     1217   0.0
FC-142 (FC-142Q) /CSM/CG/CG-FC/FC-142Q.Seq.d/                        1217   0.0
SSC796 (SSC796Q) /CSM/SS/SSC7-D/SSC796Q.Seq.d/                       1211   0.0
AFI254 (AFI254Q) /CSM/AF/AFI2-C/AFI254Q.Seq.d/                       1029   0.0
CFI568 (CFI568Q) /CSM/CF/CFI5-C/CFI568Q.Seq.d/                       1027   0.0
AFD795 (AFD795Q) /CSM/AF/AFD7-D/AFD795Q.Seq.d/                       1025   0.0
SFE768 (SFE768Q) /CSM/SF/SFE7-C/SFE768Q.Seq.d/                       1023   0.0
CFI634 (CFI634Q) /CSM/CF/CFI6-B/CFI634Q.Seq.d/                       1023   0.0
AFO835 (AFO835Q) /CSM/AF/AFO8-B/AFO835Q.Seq.d/                       1023   0.0
AFG841 (AFG841Q) /CSM/AF/AFG8-B/AFG841Q.Seq.d/                       1023   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1215  0.0  1
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1215  0.0  1
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.    82  6e-15  2
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76  7e-15  2
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76  7e-15  2
CC133697|CC133697.1 NDL.83G19.SP6 Notre Dame Liverpool Aedes aegypti genomic clone NDL.83G19, DNA sequence.    46  1e-14  6
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    86  6e-13  1
U40704|U40704.1 Candida albicans catalase (Cat) gene, complete cds.    72  1e-08  1
AV405682|AV405682.1 Bombyx mori cDNA clone:wdV30109.              52  1e-06  2
AX536932|AX536932.1 Sequence 533 from Patent WO02064766.          64  2e-06  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   434   e-120
AY734528_1(AY734528|pid:none) Oplegnathus fasciatus catalase mRN...   264   2e-69
BC086479_1(BC086479|pid:none) Xenopus laevis hypothetical LOC495...   261   2e-68
BC099349_1(BC099349|pid:none) Xenopus laevis hypothetical LOC495...   261   2e-68
(Q9PWF7) RecName: Full=Catalase;          EC=1.11.1.6;  &AB03187...   260   2e-68
BC090377_1(BC090377|pid:none) Xenopus tropicalis hypothetical LO...   259   5e-68
AY242059_1(AY242059|pid:none) Melopsittacus undulatus catalase (...   258   1e-67
AB173856_1(AB173856|pid:none) Macaca fascicularis brain cDNA clo...   252   8e-66
(Q2I6W4) RecName: Full=Catalase;          EC=1.11.1.6;  &DQ24181...   251   2e-65
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   250   2e-65

 psg: 0.75  gvh: 0.25  alm: 0.55  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 28.0 %: cytoplasmic
	 16.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for FC-BB12 is nuc

>FC-BB12F.Seq
ATTTCACCAGTGAAACTGGTATTCAAAATTACACAGCTGAAGAAGCTGCCAAGATGTCAA
TGAACGATCCAGATTCAGCAACTCGTGATCTCTTTGAAACCATCGCCAAAGGTGGTGAAC
CAGCTTGGAAAGTTTCCATTCAATTGATGGAATTTGAAGATGCCTTAAAGTATCGTTTCA
ATCCATTCGATGTAACAAAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTC
GTATGGTTTTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCT
CACCATCCCACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTC
TCTTCTCTTATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAG
TCAATTGTCCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGG
CTGTCAATGGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAG
AGCCACATCCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAAC
CATACAATCATCCA----------