>FC-BS14 (FC-BS14Q) /CSM/FC/FC-BS/FC-BS14Q.Seq.d/
CTCAATGTTTGCATCCACTTGTAAACCACATGAATTAAACAATTTCATTGATTTAACTTT
AAGAAATAGTTTCTTAATCTCTGCTGATATGGCACATGCTATTCATCCAAATTACACAGC
AAATCATGAACCACTTCATAGACCAGCTCTTAATAAAGGTCCAGTAATCAAATATAATGC
AAATTTACGTTATGCTTCAAATGGTCCAACTAGTTTTGTTATCTTGGATATCTGTAAAAA
GAATGGTATCCCAATTCAAGAATTCCTCGTCAAAAATGATTCACCATGTGGTTCAACAAT
TGGTCCAATCATTTCTGGTACTTATGGTATTAGAACTGTAGATATTGGTAATCCACAATT
ATCAATGCATTCAATTCGTGAAACTTGTGGTGTTGCTGATATCACTCATGGTATTAATTT
AATTCAAAAATATTTTGAAAAATTTACAAAATTAGATATTATTAAATCTGATTTAGAATA
AAAATTAAAAAAAAATAAAAAAATAAAAAAAATAAAAATAAAAAAATAAAACCA

SMFASTCKPHELNNFIDLTLRNSFLISADMAHAIHPNYTANHEPLHRPALNKGPVIKYNA
NLRYASNGPTSFVILDICKKNGIPIQEFLVKNDSPCGSTIGPIISGTYGIRTVDIGNPQL
SMHSIRETCGVADITHGINLIQKYFEKFTKLDIIKSDLE*klkknkkikkikikk*n

Frame A:
lnvcihl*tt*ikqfh*fnfkk*flnlc*ygtcyssklhsks*tts*tss**rssnqi*c
kftlcfkwsn*fcylgyl*kewypnsriprqk*ftmwfnnwsnhfwylwy*ncryw*sti
inafns*nlwcc*yhswy*fnskif*kiykiryy*i*frikikkk*knkknknkkikp


Frame B:
SMFASTCKPHELNNFIDLTLRNSFLISADMAHAIHPNYTANHEPLHRPALNKGPVIKYNA
NLRYASNGPTSFVILDICKKNGIPIQEFLVKNDSPCGSTIGPIISGTYGIRTVDIGNPQL
SMHSIRETCGVADITHGINLIQKYFEKFTKLDIIKSDLE*klkknkkikkikikk*n


Frame C:
qclhplvnhmn*tisli*l*eivs*slliwhmlfiqitqqimnhfidqllikvq*snimq
iyvmlqmvqlvllswisvkrmvsqfknssskmihhvvqqlvqsflvlmvlel*ilvihny
qciqfvklvvllislmvli*fknilknlqn*illnli*nkn*kkikk*kk*k*knkt

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-BS14 (FC-BS14Q) /CSM/FC/FC-BS/FC-BS14Q.Seq.d/                      950   0.0
VFK506 (VFK506Q) /CSM/VF/VFK5-A/VFK506Q.Seq.d/                        942   0.0
VFE843 (VFE843Q) /CSM/VF/VFE8-B/VFE843Q.Seq.d/                        942   0.0
SSF820 (SSF820Q) /CSM/SS/SSF8-A/SSF820Q.Seq.d/                        942   0.0
SSC761 (SSC761Q) /CSM/SS/SSC7-C/SSC761Q.Seq.d/                        942   0.0
SSC531 (SSC531Q) /CSM/SS/SSC5-B/SSC531Q.Seq.d/                        942   0.0
SLE225 (SLE225Q) /CSM/SL/SLE2-B/SLE225Q.Seq.d/                        942   0.0
SLC145 (SLC145Q) /CSM/SL/SLC1-B/SLC145Q.Seq.d/                        942   0.0
SLC105 (SLC105Q) /CSM/SL/SLC1-A/SLC105Q.Seq.d/                        942   0.0
SLB311 (SLB311Q) /CSM/SL/SLB3-A/SLB311Q.Seq.d/                        942   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BM518933|BM518933.1 894103E07.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDNA, mRNA sequence.    54   2e-06  2
CB380700|CB380700.1 3529_1_23_1_H04.x_4 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence.    38   1e-05  3
BG103186|BG103186.1 RHIZ2_19_C02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA sequence.    38   2e-04  3
BG103106|BG103106.1 RHIZ2_18_C03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA sequence.    38   2e-04  3
BG356680|BG356680.1 OV2_26_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence.    38   2e-04  3
BE355215|BE355215.1 DG1_10_A09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence.    38   2e-04  3
BU098580|BU098580.1 946136E12.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.    38   2e-04  3
BU571833|BU571833.1 946185C11.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.    38   3e-04  3
BG446932|BG446932.1 GA__Eb0039M13f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0039M13f, mRNA sequence.    38   0.012  2
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 map 215673-367476 strain AX4, complete sequence.    34   0.023  7

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54M70) RecName: Full=Aspartyl aminopeptidase;          EC=3.4....   327   1e-88
AC159446_25(AC159446|pid:none) Trypanosoma brucei chromosome 3 c...   178   7e-44
EF576009_1(EF576009|pid:none) Oryza sativa (indica cultivar-grou...   168   7e-41
AM494966_233(AM494966|pid:none) Leishmania braziliensis chromoso...   166   3e-40
EU954490_1(EU954490|pid:none) Zea mays clone 1468685 unknown mRNA.    166   4e-40
BT062007_1(BT062007|pid:none) Zea mays full-length cDNA clone ZM...   166   4e-40
AP007151_1241(AP007151|pid:none) Aspergillus oryzae RIB40 genomi...   165   8e-40
CU633900_915(CU633900|pid:none) Podospora anserina genomic DNA c...   162   5e-39
AB026632_4(AB026632|pid:none) Arabidopsis thaliana genomic DNA, ...   161   1e-38
CP001330_563(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   161   1e-38

 psg: 0.70  gvh: 0.46  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 40.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for FC-BS14 is nuc

>FC-BS14E.Seq
CTCAATGTTTGCATCCACTTGTAAACCACATGAATTAAACAATTTCATTGATTTAACTTT
AAGAAATAGTTTCTTAATCTCTGCTGATATGGCACATGCTATTCATCCAAATTACACAGC
AAATCATGAACCACTTCATAGACCAGCTCTTAATAAAGGTCCAGTAATCAAATATAATGC
AAATTTACGTTATGCTTCAAATGGTCCAACTAGTTTTGTTATCTTGGATATCTGTAAAAA
GAATGGTATCCCAATTCAAGAATTCCTCGTCAAAAATGATTCACCATGTGGTTCAACAAT
TGGTCCAATCATTTCTGGTACTTATGGTATTAGAACTGTAGATATTGGTAATCCACAATT
ATCAATGCATTCAATTCGTGAAACTTGTGGTGTTGCTGATATCACTCATGGTATTAATTT
AATTCAAAAATATTTTGAAAAATTTACAAAATTAGATATTATTAAATCTGATTTAGAATA
AAAATTAAAAAAAAATAAAAAAATAAAAAAAATAAAAATAAAAAAATAAAACCA