>SHL102 (SHL102Q) /CSM/SH/SHL1-A/SHL102Q.Seq.d/
XXXXXXXXXXTTATTAAAAGNCCATGAAAATGATAAACTCATTAGACATAAAGAGTATGG
TGGCTACTCAAAGGGGTTTCCAGAGAATCCAAGAATCACAATGAAGGATTATAAACTTGT
TGCTCAGTCTTCATTTGATCAAGGTGGTACAAACCCATTGGCTGATCTAATGCCAGACAT
TAGAACTGTCTTTGAAAAATGTTTTTTCCAAGTACACTCGCCGCTCAACCGTTGGTCAGA
GGTGATGATATCGAATTACTCTTATGGGACGTCCAAGGTTTCCCATGTAGATTCGCTGTC
GAAGGTGGTCAATGTATCGATCCTTCAAGCTTGAAAGTTGGTGGTAAATACTCGTTTATT
GCCTTTTCAACATGTCGTTNTAAATTTGATAATCAAAAAATTCACGATTGTGATTGGATC
ATTCAAGGCCCCACAACTCCATCGCTATGCGCAAATTGTGGTAAAATTTGCACTTCAAAA
TGTACAACAAACTATTGTGATCGTGATTGTCAAACTGTTGATTGGCAAAGTGATCATAAA
TTAATTTGTGGTTTAAAATCTTTTAAAGACAGATGAGATGAAACACCAATTAAAAATTAA
ATTAAATAAAAAAAAATTAAATTAAATAATAAAT

---ikxp*k**th*t*rvwwllkgvsresknhnegl*tccsvfi*srwykpig*snarh*
ncl*KMFFPSTLAAQPLVRGDDIELLLWDVQGFPCRFAVEGGQCIDPSSLKVGGKYSFIA
FSTCRXKFDNQKIHDCDWIIQGPTTPSLCANCGKICTSKCTTNYCDRDCQTVDWQSDHKL
ICGLKSFKDR*detpikn*ik*kkiklnnk

Frame A:
---y*kxmkminsldiksmvatqrgfqriqesq*riinlllslhlikvvqthwli*cqtl
elslknvfskytrrstvgqr**yritlmgrprfpm*ircrrwsmyrsfklesww*ilvyc
lfnmsx*i**sknsrl*ldhsrphnsiamrklw*nlhfkmynkll*s*lsnc*lak*s*i
nlwfkif*rqmr*ntn*kln*ikkn*ik**


Frame B:
---ikxp*k**th*t*rvwwllkgvsresknhnegl*tccsvfi*srwykpig*snarh*
ncl*KMFFPSTLAAQPLVRGDDIELLLWDVQGFPCRFAVEGGQCIDPSSLKVGGKYSFIA
FSTCRXKFDNQKIHDCDWIIQGPTTPSLCANCGKICTSKCTTNYCDRDCQTVDWQSDHKL
ICGLKSFKDR*detpikn*ik*kkiklnnk


Frame C:
---lkxhendklirhkeyggyskgfpenpritmkdyklvaqssfdqggtnpladlmpdir
tvfekcffqvhsplnrwsevmisnysygtskvshvdslskvvnvsilqa*klvvntrllp
fqhvvxnliikkftivigsfkapqlhryaqivvkfalqnvqqtivivivklligkviin*
fvv*nllktdemkhqlkiklnkkkln*iin

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHL102 (SHL102Q) /CSM/SH/SHL1-A/SHL102Q.Seq.d/                       1132   0.0
CHF421 (CHF421Q) /CSM/CH/CHF4-A/CHF421Q.Seq.d/                       1132   0.0
CHM846 (CHM846Q) /CSM/CH/CHM8-B/CHM846Q.Seq.d/                       1112   0.0
CHR420 (CHR420Q) /CSM/CH/CHR4-A/CHR420Q.Seq.d/                       1104   0.0
CHE616 (CHE616Q) /CSM/CH/CHE6-A/CHE616Q.Seq.d/                       1098   0.0
AHF612 (AHF612Q) /CSM/AH/AHF6-A/AHF612Q.Seq.d/                       1090   0.0
CHH517 (CHH517Q) /CSM/CH/CHH5-A/CHH517Q.Seq.d/                       1063   0.0
AHO814 (AHO814Q) /CSM/AH/AHO8-A/AHO814Q.Seq.d/                       1057   0.0
AHH739 (AHH739Q) /CSM/AH/AHH7-B/AHH739Q.Seq.d/                       1055   0.0
AHR373 (AHR373Q) /CSM/AH/AHR3-D/AHR373Q.Seq.d/                       1049   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strainAX4, complete sequence.  1132   0.0    2
AC108322|AC108322.4 Rattus norvegicus clone CH230-261G16, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    48   0.25   1
AX145718|AX145718.1 Sequence 4440 from Patent WO0134809.           40   2.1    2
AR486354|AR486354.1 Sequence 4440 from patent US 6703492.          40   2.1    2
AF270400|AF270400.1 Staphylococcus epidermidis strain SR1 clone step.4047e08 genomic sequence.    40   2.1    2
BW519241|BW519241.1 Ciona savignyi cDNA, clone:csga047a13, 5'end, single read.    44   3.9    1
EC018702|EC018702.1 3867011 KZ41 Caenorhabditis elegans cDNA clone 1414423, mRNA sequence.    44   3.9    1
EC017601|EC017601.1 6644006 KZ41 Caenorhabditis elegans cDNA clone 1781996, mRNA sequence.    44   3.9    1
D73336|D73336.1 C.elegans cDNA clone yk117e5 : 3' end, single read.    44   3.9    1
D73092|D73092.1 C.elegans cDNA clone yk113h7 : 3' end, single read.    44   3.9    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK221682_1(AK221682|pid:none) Arabidopsis thaliana mRNA for puta...    45   0.002
(Q9SJA1) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19;...    45   0.002
AF068894_1(AF068894|pid:none) Homo sapiens rectosigmoid colon pr...    42   0.011
AF068897_1(AF068897|pid:none) Homo sapiens normal colorectal epi...    42   0.011
(O75513) RecName: Full=Deformed epidermal autoregulatory factor ...    42   0.011
CU633873_66(CU633873|pid:none) Podospora anserina genomic DNA ch...    40   0.041
AF007165_1(AF007165|pid:none) Homo sapiens suppressin (spn) mRNA...    40   0.054
AB012248_17(AB012248|pid:none) Arabidopsis thaliana genomic DNA,...    40   0.070
AM920437_2017(AM920437|pid:none) Penicillium chrysogenum Wiscons...    39   0.16
AE014296_2373(AE014296|pid:none) Drosophila melanogaster chromos...    39   0.16

 psg: 0.93  gvh: 0.55  alm: 0.45  top: 0.20  tms: 0.00  mit: 0.34  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: extracellular, including cell wall
	 24.0 %: cytoplasmic
	 16.0 %: vacuolar
	 16.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SHL102 is exc

>SHL102Z.Seq
NNNNNNNNNNTTATTAAAAGNCCATGAAAATGATAAACTCATTAGACATAAAGAGTATGG
TGGCTACTCAAAGGGGTTTCCAGAGAATCCAAGAATCACAATGAAGGATTATAAACTTGT
TGCTCAGTCTTCATTTGATCAAGGTGGTACAAACCCATTGGCTGATCTAATGCCAGACAT
TAGAACTGTCTTTGAAAAATGTTTTTTCCAAGTACACTCGCCGCTCAACCGTTGGTCAGA
GGTGATGATATCGAATTACTCTTATGGGACGTCCAAGGTTTCCCATGTAGATTCGCTGTC
GAAGGTGGTCAATGTATCGATCCTTCAAGCTTGAAAGTTGGTGGTAAATACTCGTTTATT
GCCTTTTCAACATGTCGTTNTAAATTTGATAATCAAAAAATTCACGATTGTGATTGGATC
ATTCAAGGCCCCACAACTCCATCGCTATGCGCAAATTGTGGTAAAATTTGCACTTCAAAA
TGTACAACAAACTATTGTGATCGTGATTGTCAAACTGTTGATTGGCAAAGTGATCATAAA
TTAATTTGTGGTTTAAAATCTTTTAAAGACAGATGAGATGAAACACCAATTAAAAATTAA
ATTAAATAAAAAAAAATTAAATTAAATAATAAAT