>SLF672 (SLF672Q) /CSM/SL/SLF6-C/SLF672Q.Seq.d/
AAATCAATTAGTGGAACAACAAGAAAAAGAAATTAAAGATATTGATAATAGTTCAGCAAT
ATCAACTTCTTCTGCAAATACATTATTAAAACATTTCAATTGGAAGAGAGAGGAATTAAT
TTTAAAATATTTTGAATCAXXXXXXXXXXATCGTGGTAGTCATGCACCTGCATCATGTGN
ACAAATGTCAATGTGGGAACNGAAATGCTCGGATGAGAGTGAAACTAGTCATTGGAAAAT
TGCAAATTCTAAACAGTGTCCAAAATGTACAGTCTCTGTTGAAAAGAATGGTGGTTGTAT
GCATGTAGTTTGTAGTCAATGTAAATATGAATGGTGTTGGATGTGTACTCACAATTGGAA
AGGTCATAATGATTTCTATGTTTGTAATCGTTTTGAAAAAAAAAAAAAAAAAAAAA

NQLVEQQEKEIKDIDNSSAISTSSANTLLKHFNWKREELILKYFES---

---RGSHAPASCXQMSMWEXKCSDESETSHWKIANSKQCPKCTVSVEKNGGCMHVVCSQC
KYEWCWMCTHNWKGHNDFYVCNRFEKKKKKK

Frame A:
ksisgttrkrn*ry***fsninffckyiiktfqleerginfkif*i---

---ivvvmhlhhvxkcqcgnxnarmrvklvigklqilnsvqnvqsllkrmvvvcm*fvvn
vnmngvgcvltigkvimismfvivlkkkkkkk

Frame B:
NQLVEQQEKEIKDIDNSSAISTSSANTLLKHFNWKREELILKYFES---

---sw*sctcimxtnvnvgtemlg*e*n*slenckf*tvskmyslc*kewwlyacsl*sm
*i*mvldvysqlers**flcl*sf*kkkkkk

Frame C:
in*wnnkkkklkiliivqqyqlllqihy*nisigrern*f*niln---

---RGSHAPASCXQMSMWEXKCSDESETSHWKIANSKQCPKCTVSVEKNGGCMHVVCSQC
KYEWCWMCTHNWKGHNDFYVCNRFEKKKKKK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLF672 (SLF672Q) /CSM/SL/SLF6-C/SLF672Q.Seq.d/                        712   0.0
CHJ249 (CHJ249Q) /CSM/CH/CHJ2-C/CHJ249Q.Seq.d/                        456   e-127
VFN588 (VFN588Q) /CSM/VF/VFN5-D/VFN588Q.Seq.d/                         52   7e-06
SSI231 (SSI231Q) /CSM/SS/SSI2-B/SSI231Q.Seq.d/                         52   7e-06
SSH335 (SSH335Q) /CSM/SS/SSH3-B/SSH335Q.Seq.d/                         52   7e-06
SSM359 (SSM359Q) /CSM/SS/SSM3-C/SSM359Q.Seq.d/                         40   0.026
SLC108 (SLC108Q) /CSM/SL/SLC1-A/SLC108Q.Seq.d/                         40   0.026
SSH676 (SSH676Q) /CSM/SS/SSH6-D/SSH676Q.Seq.d/                         38   0.10
SHL518 (SHL518Q) /CSM/SH/SHL5-A/SHL518Q.Seq.d/                         38   0.10
CHG676 (CHG676Q) /CSM/CH/CHG6-D/CHG676Q.Seq.d/                         38   0.10

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU053095) Dictyostelium discoideum slug cDNA, clone SLF672.      476   e-130  1
(BJ381135) Dictyostelium discoideum cDNA clone:ddc40a14, 3' ...   456   e-124  1
(AU061749) Dictyostelium discoideum slug cDNA, clone SLF672.      276   6e-70  1
(EJ414452) 1093012171708 Global-Ocean-Sampling_GS-28-01-01-1...    44   6e-04  2
(FG288581) 1108793272353 New World Screwworm Egg 9261 ESTs C...    42   0.004  2
(FG297256) 1108793275648 New World Screwworm Larvae 9387 EST...    42   0.004  2
(AC196929) Gallus gallus chromosome UNKNOWN clone CH261-173D...    54   0.004  1
(EK491657) 1095505090899 Global-Ocean-Sampling_GS-32-01-01-1...    38   0.005  2
(AU073741) Dictyostelium discoideum slug cDNA, clone SSI231.       52   0.017  1
(AU073480) Dictyostelium discoideum slug cDNA, clone SSH335.       52   0.017  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9P3U4) RecName: Full=Uncharacterized RING finger protein C328....   113   2e-24
DQ665646_1(DQ665646|pid:none) Gibberella zeae RING-5 mRNA, compl...   111   9e-24
FM992688_1298(FM992688|pid:none) Candida dubliniensis CD36 chrom...   110   1e-23
AM920437_426(AM920437|pid:none) Penicillium chrysogenum Wisconsi...   110   2e-23
AP007155_312(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...   109   3e-23
CR382134_55(CR382134|pid:none) Debaryomyces hansenii strain CBS7...   109   3e-23
AE017349_298(AE017349|pid:none) Cryptococcus neoformans var. neo...   108   4e-23
AL132862_32(AL132862|pid:none) Caenorhabditis elegans YAC Y73F8A...   108   6e-23
AE014296_1929(AE014296|pid:none) Drosophila melanogaster chromos...   108   7e-23
AK223550_1(AK223550|pid:none) Homo sapiens mRNA for ariadne homo...   105   5e-22

 psg: 0.75  gvh: 0.43  alm: 0.52  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 20.0 %: mitochondrial
	 16.0 %: cytoplasmic
	  4.0 %: peroxisomal

>> prediction for SLF672 is nuc

>SLF672F.Seq
AAATCAATTAGTGGAACAACAAGAAAAAGAAATTAAAGATATTGATAATAGTTCAGCAAT
ATCAACTTCTTCTGCAAATACATTATTAAAACATTTCAATTGGAAGAGAGAGGAATTAAT
TTTAAAATATTTTGAATCA----------

>SLF672Z.Seq
----------ATCGTGGTAGTCATGCACCTGCATCATGTGNACAAATGTCAATGTGGGAA
CNGAAATGCTCGGATGAGAGTGAAACTAGTCATTGGAAAATTGCAAATTCTAAACAGTGT
CCAAAATGTACAGTCTCTGTTGAAAAGAATGGTGGTTGTATGCATGTAGTTTGTAGTCAA
TGTAAATATGAATGGTGTTGGATGTGTACTCACAATTGGAAAGGTCATAATGATTTCTAT
GTTTGTAATCGTTTTGAAAAAAAAAAAAAAAAAAAAA

>SLF672P.Seq
AAATCAATTAGTGGAACAACAAGAAAAAGAAATTAAAGATATTGATAATAGTTCAGCAAT
ATCAACTTCTTCTGCAAATACATTATTAAAACATTTCAATTGGAAGAGAGAGGAATTAAT
TTTAAAATATTTTGAATCA----------ATCGTGGTAGTCATGCACCTGCATCATGTGN
ACAAATGTCAATGTGGGAACNGAAATGCTCGGATGAGAGTGAAACTAGTCATTGGAAAAT
TGCAAATTCTAAACAGTGTCCAAAATGTACAGTCTCTGTTGAAAAGAATGGTGGTTGTAT
GCATGTAGTTTGTAGTCAATGTAAATATGAATGGTGTTGGATGTGTACTCACAATTGGAA
AGGTCATAATGATTTCTATGTTTGTAATCGTTTTGAAAAAAAAAAAAAAAAAAAAA