>VHE245 (VHE245Q) /CSM/VH/VHE2-B/VHE245Q.Seq.d/
ATTATTTTATTTTATAAGCTTTGAAGAAAATGAGAGAATTTTTAAAAGATGATTATGATG
TAATAGTTTGTGGTGGTGGTCCAGTTGGTTTGGCTACTGCATACAGATGTGCCAAAGCTG
GAAAGAAAGTACTTTGTCTCGAAAAATCAGTATTCTTTAATGGAGGTGGTAGTAGTGGTG
ATGTTGTTAGAATGTTACGTACAATGTACACTGAAGATTATATGGCCGATTTAGCACATG
AAACCCTTGGACTCTGGAAAGAACTTGGTGATGATGCTGGTGAAGGTGATTTAGTTTGGA
TGACAGGTCTCCTAAATTTTGGTGATCCAAATTATGGTGCAGGTGGTCCANAAGGTACTT
TATTAGGACCAATTCCAAATTTAGAGAGATTGGGTATGCAATACAAAGTGTTAACTGCTC
AAGAAATTATGGAAGAGTATCCATTTAGAAACATTCCATCCAATCACCAAGGTGTTTTTG
CTCCAGACAATGGTGTTATCAATTTACCATTGGTATTACGTTCTCTTTACAAGTTATGTT
TACAATATGXXXXXXXXXXGNTGGGNCANTGGTTTTTTTAACTNTGCCTATCGNTCAGTC
GATCNCATTTTTCAAGTTGAAGGTNTTGATGAGTTACGNGCCAAANTACGTTTCAATTGG
GGNTTCATCGANGAAGTTGAANATCCNCAANATGATCANCNANATGTTGACCCCCATCNC
AATTTAAGNGGTCCAAANGNTAAAAAATTCAGATCAAATGTATCCCAAGNTGCCNTTCAA
CCAANATTCAAAGNTCCAANAAACTTTAAACCAA

yfil*ALKKMREFLKDDYDVIVCGGGPVGLATAYRCAKAGKKVLCLEKSVFFNGGGSSGD
VVRMLRTMYTEDYMADLAHETLGLWKELGDDAGEGDLVWMTGLLNFGDPNYGAGGPXGTL
LGPIPNLERLGMQYKVLTAQEIMEEYPFRNIPSNHQGVFAPDNGVINLPLVLRSLYKLCL
QY---

---WXXGFFNXAYRSVDXIFQVEGXDELRAKXRFNWGFIXEVEXPQXDXXXVDPHXNLXG
PXXKKFRSNVSQXAXQPXFKXPXNFKP

Frame A:
iilfykl*rk*enf*kmimm**fvvvvqlvwllhtdvpklerkyfvsknqyslmevvvvv
mllecyvqctlkiiwpi*hmkpldsgknlvmmlvkvi*fg*qvs*ilviqimvqvvxkvl
y*dqfqi*rdwvcntkc*llkklwksihletfhpitkvfllqtmvlsiyhwyyvlftsyv
ynm---

---xgxxvfltxpixqsixffklkvlmsyxpxyvsigxssxklxixxmixxmltpixi*x
vqxxknsdqmypkxpfnqxskxqxtlnq

Frame B:
lfyfisfeenerifkr*l*cnslwwwsswfgyciqmcqswkestlsrkisil*wrw**w*
cc*nvtynvh*rlygrfst*npwtlertw**cw*r*fslddrspkfw*sklwcrwsxryf
irtnskfreigyaiqsvncsrnygrvsi*khsiqsprcfcsrqwcyqftigitfslqvmf
ti---

---xgxwff*lclsxsrshfss*rx**vtxqxtfqlgxhrxs*xsxx*sxxc*ppsqfkx
skx*kiqikcipxcxstxiqxsxkl*t

Frame C:
yfil*ALKKMREFLKDDYDVIVCGGGPVGLATAYRCAKAGKKVLCLEKSVFFNGGGSSGD
VVRMLRTMYTEDYMADLAHETLGLWKELGDDAGEGDLVWMTGLLNFGDPNYGAGGPXGTL
LGPIPNLERLGMQYKVLTAQEIMEEYPFRNIPSNHQGVFAPDNGVINLPLVLRSLYKLCL
QY---

---WXXGFFNXAYRSVDXIFQVEGXDELRAKXRFNWGFIXEVEXPQXDXXXVDPHXNLXG
PXXKKFRSNVSQXAXQPXFKXPXNFKP

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHQ418 (VHQ418Q) /CSM/VH/VHQ4-A/VHQ418Q.Seq.d/                       1082   0.0
VHP706 (VHP706Q) /CSM/VH/VHP7-A/VHP706Q.Seq.d/                       1082   0.0
VHO717 (VHO717Q) /CSM/VH/VHO7-A/VHO717Q.Seq.d/                       1082   0.0
VHM609 (VHM609Q) /CSM/VH/VHM6-A/VHM609Q.Seq.d/                       1082   0.0
VHM587 (VHM587Q) /CSM/VH/VHM5-D/VHM587Q.Seq.d/                       1082   0.0
VHM372 (VHM372Q) /CSM/VH/VHM3-C/VHM372Q.Seq.d/                       1082   0.0
VHL890 (VHL890Q) /CSM/VH/VHL8-D/VHL890Q.Seq.d/                       1082   0.0
VHL517 (VHL517Q) /CSM/VH/VHL5-A/VHL517Q.Seq.d/                       1082   0.0
VHL117 (VHL117Q) /CSM/VH/VHL1-A/VHL117Q.Seq.d/                       1082   0.0
VHK762 (VHK762Q) /CSM/VH/VHK7-C/VHK762Q.Seq.d/                       1082   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC009598|AC009598.3 Homo sapiens chromosome 8 clone RP11-223O12 map 8, WORKING DRAFTSEQUENCE, 9 unordered pieces.    40   0.031  4
CQ344998|CQ344998.1 Sequence 19092 from Patent WO0157275.          38   0.24   2
CQ308193|CQ308193.1 Sequence 19298 from Patent WO0186003.          38   0.24   2
CQ270885|CQ270885.1 Sequence 19146 from Patent WO0157277.          38   0.24   2
CQ232880|CQ232880.1 Sequence 19719 from Patent WO0157273.          38   0.24   2
CQ184373|CQ184373.1 Sequence 15769 from Patent WO0157274.          38   0.24   2
CQ149594|CQ149594.1 Sequence 19616 from Patent WO0157276.          38   0.24   2
CQ110849|CQ110849.1 Sequence 19708 from Patent WO0157272.          38   0.24   2
EJ261209|EJ261209.1 1095349040450 Global-Ocean-Sampling_GS-27-01-01-1P8-2P0KB marine metagenome genomic clone 1061005495618 3', genomic survey sequence.    48   0.40   1
EJ150489|EJ150489.1 1092343756363 Global-Ocean-Sampling_GS-27-01-01-1P8-2P0KB marine metagenome genomic clone 1061001453166 5', genomic survey sequence.    48   0.40   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU638744_413(CU638744|pid:none) Podospora anserina genomic DNA c...   177   5e-43
Y18574_4(Y18574|pid:none) Streptomyces tendae strain Tue901, nik...   100   1e-19
AM286415_1545(AM286415|pid:none) Yersinia enterocolitica subsp. ...    73   1e-11
CP001291_5186(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    73   1e-11
(Q29RU9) RecName: Full=Peroxisomal sarcosine oxidase;          S...    71   4e-11
BC114006_1(BC114006|pid:none) Bos taurus L-pipecolic acid oxidas...    71   4e-11
AY892312_1(AY892312|pid:none) Synthetic construct Homo sapiens c...    70   8e-11
CR859295_1(CR859295|pid:none) Pongo abelii mRNA; cDNA DKFZp469L1...    70   8e-11
CR457155_1(CR457155|pid:none) Homo sapiens full open reading fra...    70   8e-11
AF134593_1(AF134593|pid:none) Homo sapiens L-pipecolic acid oxid...    70   8e-11

 psg: 0.67  gvh: 0.49  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 36.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for VHE245 is cyt

>VHE245F.Seq
ATTATTTTATTTTATAAGCTTTGAAGAAAATGAGAGAATTTTTAAAAGATGATTATGATG
TAATAGTTTGTGGTGGTGGTCCAGTTGGTTTGGCTACTGCATACAGATGTGCCAAAGCTG
GAAAGAAAGTACTTTGTCTCGAAAAATCAGTATTCTTTAATGGAGGTGGTAGTAGTGGTG
ATGTTGTTAGAATGTTACGTACAATGTACACTGAAGATTATATGGCCGATTTAGCACATG
AAACCCTTGGACTCTGGAAAGAACTTGGTGATGATGCTGGTGAAGGTGATTTAGTTTGGA
TGACAGGTCTCCTAAATTTTGGTGATCCAAATTATGGTGCAGGTGGTCCANAAGGTACTT
TATTAGGACCAATTCCAAATTTAGAGAGATTGGGTATGCAATACAAAGTGTTAACTGCTC
AAGAAATTATGGAAGAGTATCCATTTAGAAACATTCCATCCAATCACCAAGGTGTTTTTG
CTCCAGACAATGGTGTTATCAATTTACCATTGGTATTACGTTCTCTTTACAAGTTATGTT
TACAATATGNNNNNNNNNN

>VHE245Z.Seq
NNNNNNNNNNGNTGGGNCANTGGTTTTTTTAACTNTGCCTATCGNTCAGTCGATCNCATT
TTTCAAGTTGAAGGTNTTGATGAGTTACGNGCCAAANTACGTTTCAATTGGGGNTTCATC
GANGAAGTTGAANATCCNCAANATGATCANCNANATGTTGACCCCCATCNCAATTTAAGN
GGTCCAAANGNTAAAAAATTCAGATCAAATGTATCCCAAGNTGCCNTTCAACCAANATTC
AAAGNTCCAANAAACTTTAAACCAA

>VHE245P.Seq
ATTATTTTATTTTATAAGCTTTGAAGAAAATGAGAGAATTTTTAAAAGATGATTATGATG
TAATAGTTTGTGGTGGTGGTCCAGTTGGTTTGGCTACTGCATACAGATGTGCCAAAGCTG
GAAAGAAAGTACTTTGTCTCGAAAAATCAGTATTCTTTAATGGAGGTGGTAGTAGTGGTG
ATGTTGTTAGAATGTTACGTACAATGTACACTGAAGATTATATGGCCGATTTAGCACATG
AAACCCTTGGACTCTGGAAAGAACTTGGTGATGATGCTGGTGAAGGTGATTTAGTTTGGA
TGACAGGTCTCCTAAATTTTGGTGATCCAAATTATGGTGCAGGTGGTCCANAAGGTACTT
TATTAGGACCAATTCCAAATTTAGAGAGATTGGGTATGCAATACAAAGTGTTAACTGCTC
AAGAAATTATGGAAGAGTATCCATTTAGAAACATTCCATCCAATCACCAAGGTGTTTTTG
CTCCAGACAATGGTGTTATCAATTTACCATTGGTATTACGTTCTCTTTACAAGTTATGTT
TACAATATG----------GNTGGGNCANTGGTTTTTTTAACTNTGCCTATCGNTCAGTC
GATCNCATTTTTCAAGTTGAAGGTNTTGATGAGTTACGNGCCAAANTACGTTTCAATTGG
GGNTTCATCGANGAAGTTGAANATCCNCAANATGATCANCNANATGTTGACCCCCATCNC
AATTTAAGNGGTCCAAANGNTAAAAAATTCAGATCAAATGTATCCCAAGNTGCCNTTCAA
CCAANATTCAAAGNTCCAANAAACTTTAAACCAA