>VHK674 (VHK674Q) /CSM/VH/VHK6-D/VHK674Q.Seq.d/
ATTATTTTATTTTATAAGCTTTGAAGAAAATGAGAGAATTTTTAAAAGATGATTATGATG
TAATAGTTTGTGGTGGTGGTCCAGTTGGTTTGGCTACTGCATACAGATGTGCCAAAGCTG
GAAAGAAAGTACTTTGTCTCGAAAAATCAGTATTCTTTAATGGAGGTGGTAGTAGTGGTG
ATGTTGTTAGAATGTTACGTACAATGTACACTGAAGATTATATGGCCGATTTAGCACATG
AAACCCTTGGACTCTGGAAAGAACTTGGTGATGATGCTGGTGAAGGTGATTTAGTTTGGA
TGACAGGTCTCCTAAATTTTGGTGATCCAAATTATGGTGCAGGTGGTCCAGAAGGTACTT
TATTAGGACCAATTCCAAATTTAGAGAGATTGGGTATGCAATACAAAGTGTTAACTGCTC
AAGAAATTATGGAAGAGTATCCATTTAGAAACATTCCATCCAATCACCAAGGTGTTTTTG
CTCCAGACAATGGTGTTATCAATTTACCATTGGTATTACGTTCTCTTTACGAGTTATGTT
TACAATATGGTTGTAAAATGGXXXXXXXXXX

yfil*ALKKMREFLKDDYDVIVCGGGPVGLATAYRCAKAGKKVLCLEKSVFFNGGGSSGD
VVRMLRTMYTEDYMADLAHETLGLWKELGDDAGEGDLVWMTGLLNFGDPNYGAGGPEGTL
LGPIPNLERLGMQYKVLTAQEIMEEYPFRNIPSNHQGVFAPDNGVINLPLVLRSLYELCL
QYGCKM---

Frame A:
iilfykl*rk*enf*kmimm**fvvvvqlvwllhtdvpklerkyfvsknqyslmevvvvv
mllecyvqctlkiiwpi*hmkpldsgknlvmmlvkvi*fg*qvs*ilviqimvqvvqkvl
y*dqfqi*rdwvcntkc*llkklwksihletfhpitkvfllqtmvlsiyhwyyvlftsyv
ynmvvk---


Frame B:
lfyfisfeenerifkr*l*cnslwwwsswfgyciqmcqswkestlsrkisil*wrw**w*
cc*nvtynvh*rlygrfst*npwtlertw**cw*r*fslddrspkfw*sklwcrwsrryf
irtnskfreigyaiqsvncsrnygrvsi*khsiqsprcfcsrqwcyqftigitfslrvmf
tiwl*n---


Frame C:
yfil*ALKKMREFLKDDYDVIVCGGGPVGLATAYRCAKAGKKVLCLEKSVFFNGGGSSGD
VVRMLRTMYTEDYMADLAHETLGLWKELGDDAGEGDLVWMTGLLNFGDPNYGAGGPEGTL
LGPIPNLERLGMQYKVLTAQEIMEEYPFRNIPSNHQGVFAPDNGVINLPLVLRSLYELCL
QYGCKM---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHK674 (VHK674Q) /CSM/VH/VHK6-D/VHK674Q.Seq.d/                       1112   0.0
VHQ418 (VHQ418Q) /CSM/VH/VHQ4-A/VHQ418Q.Seq.d/                       1104   0.0
VHP706 (VHP706Q) /CSM/VH/VHP7-A/VHP706Q.Seq.d/                       1104   0.0
VHO717 (VHO717Q) /CSM/VH/VHO7-A/VHO717Q.Seq.d/                       1104   0.0
VHM609 (VHM609Q) /CSM/VH/VHM6-A/VHM609Q.Seq.d/                       1104   0.0
VHM587 (VHM587Q) /CSM/VH/VHM5-D/VHM587Q.Seq.d/                       1104   0.0
VHM372 (VHM372Q) /CSM/VH/VHM3-C/VHM372Q.Seq.d/                       1104   0.0
VHL890 (VHL890Q) /CSM/VH/VHL8-D/VHL890Q.Seq.d/                       1104   0.0
VHL517 (VHL517Q) /CSM/VH/VHL5-A/VHL517Q.Seq.d/                       1104   0.0
VHL117 (VHL117Q) /CSM/VH/VHL1-A/VHL117Q.Seq.d/                       1104   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ424530) Dictyostelium discoideum cDNA clone:ddv52c20, 5' ...  1108   0.0    1
(BJ427626) Dictyostelium discoideum cDNA clone:ddv63d06, 5' ...  1100   0.0    1
(BJ427355) Dictyostelium discoideum cDNA clone:ddv62l01, 5' ...  1100   0.0    1
(BJ426719) Dictyostelium discoideum cDNA clone:ddv60b05, 5' ...  1100   0.0    1
(BJ425811) Dictyostelium discoideum cDNA clone:ddv56m21, 5' ...  1100   0.0    1
(BJ425519) Dictyostelium discoideum cDNA clone:ddv56a04, 5' ...  1100   0.0    1
(BJ425442) Dictyostelium discoideum cDNA clone:ddv55p17, 5' ...  1100   0.0    1
(BJ425148) Dictyostelium discoideum cDNA clone:ddv54d24, 5' ...  1100   0.0    1
(BJ424903) Dictyostelium discoideum cDNA clone:ddv54a05, 5' ...  1100   0.0    1
(BJ424606) Dictyostelium discoideum cDNA clone:ddv53a05, 5' ...  1100   0.0    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU638744_413(CU638744|pid:none) Podospora anserina genomic DNA c...   204   2e-51
Y18574_4(Y18574|pid:none) Streptomyces tendae strain Tue901, nik...   109   5e-23
(Q29RU9) RecName: Full=Peroxisomal sarcosine oxidase;          S...    78   1e-13
AM286415_1545(AM286415|pid:none) Yersinia enterocolitica subsp. ...    78   1e-13
AY892312_1(AY892312|pid:none) Synthetic construct Homo sapiens c...    77   2e-13
CR457155_1(CR457155|pid:none) Homo sapiens full open reading fra...    77   2e-13
AF134593_1(AF134593|pid:none) Homo sapiens L-pipecolic acid oxid...    77   2e-13
AX882278_1(AX882278|pid:none) Sequence 17183 from Patent EP10746...    77   2e-13
BC114006_1(BC114006|pid:none) Bos taurus L-pipecolic acid oxidas...    77   3e-13
CP001291_5186(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    76   6e-13

 psg: 0.67  gvh: 0.49  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for VHK674 is cyt

>VHK674F.Seq
ATTATTTTATTTTATAAGCTTTGAAGAAAATGAGAGAATTTTTAAAAGATGATTATGATG
TAATAGTTTGTGGTGGTGGTCCAGTTGGTTTGGCTACTGCATACAGATGTGCCAAAGCTG
GAAAGAAAGTACTTTGTCTCGAAAAATCAGTATTCTTTAATGGAGGTGGTAGTAGTGGTG
ATGTTGTTAGAATGTTACGTACAATGTACACTGAAGATTATATGGCCGATTTAGCACATG
AAACCCTTGGACTCTGGAAAGAACTTGGTGATGATGCTGGTGAAGGTGATTTAGTTTGGA
TGACAGGTCTCCTAAATTTTGGTGATCCAAATTATGGTGCAGGTGGTCCAGAAGGTACTT
TATTAGGACCAATTCCAAATTTAGAGAGATTGGGTATGCAATACAAAGTGTTAACTGCTC
AAGAAATTATGGAAGAGTATCCATTTAGAAACATTCCATCCAATCACCAAGGTGTTTTTG
CTCCAGACAATGGTGTTATCAATTTACCATTGGTATTACGTTCTCTTTACGAGTTATGTT
TACAATATGGTTGTAAAATGGNNNNNNNNNN