>VSD603 (VSD603Q) /CSM/VS/VSD6-A/VSD603Q.Seq.d/
ATTAAAGTGTGTTTTTTTATTTTTTTTTTTTTATATTTTCTAATTTTTATAATTTAAATA
ATAATAATAATTAAAAATAATAATAATTAAAAATAANCAAAANCAAATAAATAAATAATA
ATTAAAAAAAAAAXXXXXXXXXX

*SVFFYFFFFIFSNFYNLNNNNN*k***lkixkxk*innn*kk---

Frame A:
ikvcffiffflyflifii*iiiiiknnnn*k*xkxnk*iiikkk---


Frame B:
lkcvflffffyif*fl*fk****lkiiiiknxqxqink**lkk---


Frame C:
*SVFFYFFFFIFSNFYNLNNNNN*k***lkixkxk*innn*kk---

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 96
Number of Sequences: 97611
Number of extensions: 96
Number of successful extensions: 0
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 0
length of query: 143
length of database: 80,480,566
effective HSP length: 17
effective length of query: 126
effective length of database: 78,821,179
effective search space: 9931468554
effective search space used: 9931468554
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 13360
Number of Sequences: 25380197
Number of extensions: 13360
Number of successful extensions: 0
Number of sequences better than 10.0: 0
length of query: 143
length of database: P,805,629,642
effective HSP length: 21
effective length of query: 122
effective length of database: P,272,645,505
effective search space: 3937262751610
effective search space used: 3937262751610
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 33,379,993

 psg: 1.01  gvh: 0.30  alm: 0.38  top: 0.47  tms: 0.00  mit: 0.37  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 24.0 %: nuclear
	 20.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for VSD603 is cyt

>VSD603F.Seq
ATTAAAGTGTGTTTTTTTATTTTTTTTTTTTTATATTTTCTAATTTTTATAATTTAAATA
ATAATAATAATTAAAAATAATAATAATTAAAAATAANCAAAANCAAATAAATAAATAATA
ATTAAAAAAAAAA----------