Contig-U04139-1
Contig ID Contig-U04139-1
Contig update 2002. 9.13
Contig sequence
>Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Contig-U04139-1Q.Seq.d
CATTATATTTAAGAAACAATGCTAAATATGCCAGAGCCTTAAAGGATTAC
AATGTTTCAGATACTTCATTGCTACCATTCAAGAGAAATGATATCATAAC
TATCACATTTAAAGATCAAGAGAATAAATGGTTCATGGGTCAACTCAATG
GTAAAGAAGGTTCATTCCCAGTTGATCATGTTGAAATTTTATTATCTGAT
GTACCACCACCACAACCAGTTCATCCAGTTGCTACTTTATCACCCCCAAT
GTCACCAACTATTCCAAACATTACAAATACTCCACCACCACCACCATCAA
TTAGTGATTCAATGTCACCACCACCACAAGTTGGTATGTTACCACCACCA
CCNCCACCATCAGTTATGGGTTCGNCCAAACCAATTGAAATTCCNTCATT
AGGTATTCCACCACCACAACCATCATCATCATCATCATCCTCCTCATCCT
CCACTAATCATATTCATTCTTTATCATCTACAAAATTAAGTGGAAGTGTC
TCAAATAAATTAAATGTGACATCTTCAAATTTAGATAAATTTCAATCAAA
ATTTCNTTAATTAATTAATTAAATAATAAAAAAAAAAAACAAAAAAAAAA
AAAAAAAAAAAAAACAATATTTTTTTAAAAA

Gap no gap
Contig length 631
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4521930
End point 4522496
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U04139
List of clone(s)

est1=SLG482E,1,632
Translated Amino Acid sequence
LYLRNNAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV
EILLSDVPPPQPVHPVATLSPPMSPTIPNITNTPPPPPSISDSMSPPPQVGMLPPPPPPS
VMGSXKPIEIPSLGIPPPQPSSSSSSSSSSTNHIHSLSSTKLSGSVSNKLNVTSSNLDKF
QSKFX*lin*iikkknkkkkkkkkqyffk


Translated Amino Acid sequence (All Frames)
Frame A:
hyi*etmlnmpep*ritmfqilhcyhsremis*lshlkikringswvnsmvkkvhsqlim
lkfyylmyhhhnqfiqlllyhpqchqlfqtlqilhhhhhqlviqchhhhklvcyhhhxhh
qlwvrpnqlkfxh*vfhhhnhhhhhhpphppliifilyhlqn*vevsqin*m*hlqi*in
fnqnfxn*lik**kkktkkkkkkknniflk


Frame B:
iifkkqc*icqslkglqcfryfiatiqek*yhnyhi*rsre*mvhgstqw*rrfips*sc
*nfii*ctttttsssscyfitpnvtnyskhykysttttin**fnvttttswyvttttxti
sygfxqtn*nsxirysttttiiiiiillilh*sysffiiykikwkclk*ikcdifkfr*i
sikislin*lnnkkkkqkkkkkkktiff*k


Frame C:
LYLRNNAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV
EILLSDVPPPQPVHPVATLSPPMSPTIPNITNTPPPPPSISDSMSPPPQVGMLPPPPPPS
VMGSXKPIEIPSLGIPPPQPSSSSSSSSSSTNHIHSLSSTKLSGSVSNKLNVTSSNLDKF
QSKFX*lin*iikkknkkkkkkkkqyffk


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U04139-1 (Contig-U04139-1Q)
/CSM_Contig/Contig-U04139-1Q.Seq.d
(631 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Conti... 813 0.0
Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Conti... 494 e-140
Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U01291-1 (Contig-U01291-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U14441-1 (Contig-U14441-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U14179-1 (Contig-U14179-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13673-1 (Contig-U13673-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U12265-1 (Contig-U12265-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U11467-1 (Contig-U11467-1Q) /CSM_Contig/Conti... 38 0.011

>Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Contig-U04139-1Q.Seq.d
Length = 631

Score = 813 bits (410), Expect = 0.0
Identities = 419/419 (100%)
Strand = Plus / Plus


Query: 1 cattatatttaagaaacaatgctaaatatgccagagccttaaaggattacaatgtttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattatatttaagaaacaatgctaaatatgccagagccttaaaggattacaatgtttcag 60


Query: 61 atacttcattgctaccattcaagagaaatgatatcataactatcacatttaaagatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacttcattgctaccattcaagagaaatgatatcataactatcacatttaaagatcaag 120


Query: 121 agaataaatggttcatgggtcaactcaatggtaaagaaggttcattcccagttgatcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaataaatggttcatgggtcaactcaatggtaaagaaggttcattcccagttgatcatg 180


Query: 181 ttgaaattttattatctgatgtaccaccaccacaaccagttcatccagttgctactttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaattttattatctgatgtaccaccaccacaaccagttcatccagttgctactttat 240


Query: 241 cacccccaatgtcaccaactattccaaacattacaaatactccaccaccaccaccatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacccccaatgtcaccaactattccaaacattacaaatactccaccaccaccaccatcaa 300


Query: 301 ttagtgattcaatgtcaccaccaccacaagttggtatgttaccaccaccaccnccaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagtgattcaatgtcaccaccaccacaagttggtatgttaccaccaccaccnccaccat 360


Query: 361 cagttatgggttcgnccaaaccaattgaaattccntcattaggtattccaccaccacaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagttatgggttcgnccaaaccaattgaaattccntcattaggtattccaccaccacaa 419


Score = 190 bits (96), Expect = 1e-48
Identities = 99/99 (100%)
Strand = Plus / Plus


Query: 479 tacaaaattaagtggaagtgtctcaaataaattaaatgtgacatcttcaaatttagataa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tacaaaattaagtggaagtgtctcaaataaattaaatgtgacatcttcaaatttagataa 538


Query: 539 atttcaatcaaaatttcnttaattaattaattaaataat 577
|||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atttcaatcaaaatttcnttaattaattaattaaataat 577


Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 557 ttaattaattaattaa 572
||||||||||||||||
Sbjct: 572 ttaattaattaattaa 557


Score = 30.2 bits (15), Expect = 2.7
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 281 tccaccaccaccaccatca 299
||||||||||| |||||||
Sbjct: 407 tccaccaccacaaccatca 425


Score = 30.2 bits (15), Expect = 2.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 204 ccaccaccacaacca 218
|||||||||||||||
Sbjct: 408 ccaccaccacaacca 422


>Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
Length = 1438

Score = 494 bits (249), Expect = e-140
Identities = 257/261 (98%)
Strand = Plus / Plus


Query: 157 aaggttcattcccagttgatcatgttgaaattttattatctgatgtaccaccaccacaac 216
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 aaggttcattcccagttgatcatgttgaaattttattatntgatgtaccaccaccacaac 60


Query: 217 cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 120


Query: 277 atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 180


Query: 337 tgttaccaccaccaccnccaccatcagttatgggttcgnccaaaccaattgaaattccnt 396
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 181 tgttaccaccaccacctccaccatcagttatgggttcgaccaaaccaattgaaattccat 240


Query: 397 cattaggtattccaccaccac 417
|||||||||||||||||||||
Sbjct: 241 cattaggtattccaccaccac 261


Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 281 tccaccaccaccaccatca 299
|||||||||||||||||||
Sbjct: 251 tccaccaccaccaccatca 269


Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 402 ggtattccaccaccac 417
||||||||||||||||
Sbjct: 318 ggtattccaccaccac 333


Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 281 tccaccaccaccacca 296
||||||||||||||||
Sbjct: 323 tccaccaccaccacca 338


Score = 32.2 bits (16), Expect = 0.69
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 280 ctccaccaccaccaccatca 299
|||||||||||| |||||||
Sbjct: 382 ctccaccaccactaccatca 401


>Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
Length = 1466

Score = 40.1 bits (20), Expect = 0.003
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 273 acaaatactccaccaccaccacca 296
|||| |||||||||||||||||||
Sbjct: 1120 acaagtactccaccaccaccacca 1143


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,662
Number of Sequences: 6905
Number of extensions: 13662
Number of successful extensions: 2581
Number of sequences better than 10.0: 316
length of query: 631
length of database: 5,674,871
effective HSP length: 16
effective length of query: 615
effective length of database: 5,564,391
effective search space: 3422100465
effective search space used: 3422100465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.14
Homology vs DNA
Query= Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Contig-U04139-1Q.Seq.d
(631 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061886) Dictyostelium discoideum slug cDNA, clone SLG482. 624 0.0 3
(L35321) Dictyostelium discoideum class VII unconventional m... 624 0.0 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 624 0.0 3
(BJ442838) Dictyostelium discoideum cDNA clone:ddv51j03, 3' ... 309 e-103 2
(AU039812) Dictyostelium discoideum slug cDNA, clone SLG482. 109 5e-46 3
(BJ419536) Dictyostelium discoideum cDNA clone:ddv36l12, 5' ... 98 5e-17 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 96 7e-16 3
(AC221175) Bos taurus clone CH240-396B14, WORKING DRAFT SEQU... 54 0.007 1
(DE215482) Trifolium pratense DNA, clone:RCG04183. 40 0.010 2
(AL512329) Human DNA sequence from clone RP11-157J24 on chro... 36 0.25 2
(AC079997) Homo sapiens BAC clone RP11-748B21 from 2, comple... 48 0.41 1
(AQ788246) HS_3143_A1_C04_MR CIT Approved Human Genomic Sper... 48 0.41 1
(AL021488) Caenorhabditis elegans YAC Y45F10A. 44 0.42 2
(BV007411) LS195 Meadowfoam genomic DNA Limnanthes alba STS ... 32 0.52 3
(AX647501) Sequence 1693 from Patent EP1270724. 36 0.60 3
(DH496487) Monosiga ovata DNA, fosmid clone: MOF-061D16, gen... 36 0.67 3
(DE217798) Trifolium pratense DNA, clone:RCG08407. 34 0.67 2
(EI924834) VUH2-68G5TV VUUBBa (VUH2) Vigna unguiculata genom... 32 0.70 3
(DE224203) Trifolium pratense DNA, clone:RCG16014. 34 0.80 2
(AQ781437) HS_3117_A2_G03_T7C CIT Approved Human Genomic Spe... 36 0.91 2
(DH503426) Monosiga ovata DNA, fosmid clone: MOF-073D10, gen... 34 0.91 3
(BZ258384) CH230-252L22.TJ CHORI-230 Segment 2 Rattus norveg... 36 1.0 3
(DY908676) CHAX3577.b1_B07.ab1 CHA(XYZ) common wild sunflowe... 32 1.1 3
(AC179745) Strongylocentrotus purpuratus clone R3-1018E15, W... 44 1.2 3
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 46 1.6 1
(AP006117) Lotus japonicus genomic DNA, chromosome 5, clone:... 46 1.6 1
(BX284929) Human DNA sequence from clone RP11-681N21 on chro... 46 1.6 1
(AC092866) Homo sapiens 12 BAC RP11-451B3 (Roswell Park Canc... 46 1.6 1
(AC092452) Homo sapiens 12P BAC RP11-207N16 (Roswell Park Ca... 46 1.6 1
(AC129795) Rattus norvegicus clone CH230-293B7, *** SEQUENCI... 46 1.6 1
(AC120806) Rattus norvegicus clone CH230-23K3, *** SEQUENCIN... 46 1.6 1
(AC103006) Rattus norvegicus clone CH230-115I4, *** SEQUENCI... 46 1.6 1
(AC096813) Rattus norvegicus clone CH230-187J20, *** SEQUENC... 46 1.6 1
(AC073956) Homo sapiens chromosome 12 clone RP11-207N16, WOR... 46 1.6 1
(BX296555) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 1.6 1
(AC024299) Homo sapiens clone RP11-681N21, WORKING DRAFT SEQ... 46 1.6 1
(DR183809) 114264 CERES-147 Arabidopsis thaliana cDNA clone ... 46 1.6 1
(AC084782) Homo sapiens chromosome 15 clone RP11-48G14 map 1... 36 1.7 5
(AC096961) Rattus norvegicus clone CH230-90B7, *** SEQUENCIN... 36 1.9 4
(AC140721) Medicago truncatula clone mth2-16c16, complete se... 34 1.9 5
(BZ177213) CH230-506K8.TVB CHORI-230 Segment 2 Rattus norveg... 36 2.1 3
(AL221058) Tetraodon nigroviridis genome survey sequence T7 ... 36 2.1 2
(BZ243402) CH230-419C24.TJ CHORI-230 Segment 2 Rattus norveg... 34 2.2 3
(AC181542) Strongylocentrotus purpuratus clone R3-1109O3, WO... 36 2.3 5
(BB930467) Trifolium pratense cDNA clone:RCC02126. 36 2.3 2
(AJ403997) Hyla arborea microsatellite DNA, clone WHA5-29. 36 2.4 2
(CC817914) 1O0004A03F Oxytricha plasmid UUGC1O library Sterk... 36 2.4 2
(DH475591) Monosiga ovata DNA, fosmid clone: MOF-024K17, gen... 32 2.6 3
(AR339412) Sequence 903 from patent US 6569662. 36 2.6 2
(CO550100) LyEST8089 Sea lamprey LyEST Petromyzon marinus cD... 30 2.6 3
(AC233100) Medicago truncatula clone mth2-132a8, WORKING DRA... 34 2.7 7
(GH072974) G992P137RN3.T0 Neurospora crassa cDNA - 1 hour He... 36 2.7 2
(DH670471) Rattus norvegicus DNA, BAC clone: RNB1-220B17, 3'... 36 2.7 3
(DH679428) Rattus norvegicus DNA, BAC clone: RNB1-232C17, 5'... 36 2.8 3
(DH633832) Rattus norvegicus DNA, BAC clone: RNB1-170P01, 3'... 36 2.8 2
(AG510784) Mus musculus molossinus DNA, clone:MSMg01-414I01.... 32 3.1 3
(GH074727) G992P141RC9.T0 Neurospora crassa cDNA - 1 hour He... 36 3.1 2
(GH101581) G993P127RE7.T0 Neurospora crassa cDNA - 1 hour Gl... 34 3.2 2
(BZ115869) CH230-255D7.TVB CHORI-230 Segment 2 Rattus norveg... 36 3.2 2
(DW094099) CLPY5282.b1_D02.ab1 CLP(XYZ) lettuce perennis Lac... 38 3.2 2
(GH011993) G1220P143FL7.T0 Neurospora crassa cDNA - 1 hour O... 34 3.2 2
(GH003798) G1220P130FP13.T0 Neurospora crassa cDNA - 1 hour ... 34 3.3 2
(CZ282087) cp20e09.f Candida parapsilosis Random Genomic Lib... 32 3.5 3
(EY773847) CR05-C1-102-078-A08-CT.F Mandarin leaf, infected ... 36 3.5 2
(EC203855) 381179 CK01 Drosophila melanogaster cDNA clone 15... 30 3.6 3
(EL513628) CHUY396.b1_G03.ab1 CHU(XYZ) puzzle sunflower Heli... 42 3.7 2
(EL513966) CHUY737.b1_B18.ab1 CHU(XYZ) puzzle sunflower Heli... 42 3.7 2
(CZ282611) cp25c10.r Candida parapsilosis Random Genomic Lib... 32 3.9 3
(ET061261) MUGQ_CH252P357J11Sp6_CP670_040 CHORI-252 Vervet M... 36 4.1 3
(AC181446) Strongylocentrotus purpuratus clone R3-1111N22, W... 36 4.6 3
(DE226622) Trifolium pratense DNA, clone:RCG19103. 30 4.6 3
(AP010301) Lotus japonicus genomic DNA, chromosome 6, clone:... 34 4.7 5
(DH489232) Monosiga ovata DNA, fosmid clone: MOF-048G10, gen... 30 4.8 3
(AX647437) Sequence 1629 from Patent EP1270724. 36 4.9 3
(AI441317) sa55c06.y1 Gm-c1004 Glycine max cDNA clone GENOME... 34 5.0 2
(CT836836) Oryza sativa (indica cultivar-group) cDNA clone:O... 34 5.6 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 5.8 5
(EF523849) Limnoria chilensis clone Lchi22 microsatellite se... 38 5.9 2
(EY032972) CAIU686.fwd CAIU Artemisia annua leaf Artemisia a... 34 6.1 2
(AZ000660) RPCI-23-313D18.TJ RPCI-23 Mus musculus genomic cl... 40 6.2 2
(AC165235) Mus musculus chromosome 8, clone RP23-332G19, com... 44 6.4 1
(AC163996) Mus musculus chromosome 8, clone RP23-6B9, comple... 44 6.4 1
(AC121968) Mus musculus BAC clone RP24-272N4 from chromosome... 44 6.4 1
(AC216913) Populus trichocarpa clone POP030-J10, complete se... 44 6.4 1
(AJ812236) Dictyostelium discoideum mRNA for diaphanous-rela... 44 6.4 1
(AC151157) Bos taurus clone CH240-470C22, WORKING DRAFT SEQU... 44 6.4 1
(AC149731) Bos taurus clone CH240-112F19, WORKING DRAFT SEQU... 44 6.4 1
(AC147523) Otolemur garnettii clone CH256-193L8, WORKING DRA... 44 6.4 1
(AC100456) Mus musculus clone RP23-138L19, LOW-PASS SEQUENCE... 44 6.4 1
(AC068567) Homo sapiens chromosome 2 clone -2013M4 map 2, LO... 44 6.4 1
(AC218780) Bos taurus clone CH240-294H11, WORKING DRAFT SEQU... 44 6.4 1
(AC185699) Bos taurus clone RP42-46O14, WORKING DRAFT SEQUEN... 44 6.4 1
(BC154701) Xenopus tropicalis cDNA clone IMAGE:7689589, cont... 44 6.4 1
(AQ307819) HS_2175_A2_H04_MR CIT Approved Human Genomic Sper... 44 6.4 1
(EJ065922) 1095458039801 Global-Ocean-Sampling_GS-26-01-01-1... 44 6.4 1
(EI916612) VUH2-46H12TR VUUBBa (VUH2) Vigna unguiculata geno... 44 6.4 1
(ED116102) AUAC-aaz02e03.b1 Ascaris suum whole genome shotgu... 44 6.4 1
(CC560751) CH240_470C22.TARBAC13P2 CHORI-240 Bos taurus geno... 44 6.4 1
(CC498761) CH240_336C19.T7 CHORI-240 Bos taurus genomic clon... 44 6.4 1
(EH753161) CNSL12445.b1_J15.ab1 CNS(LMS) yellow starthistle ... 44 6.4 1
(EC002284) 7398362 CE04 Caenorhabditis elegans cDNA clone 27... 44 6.4 1
(AV176177) Caenorhabditis elegans cDNA clone:yk509a8 : 3' en... 44 6.4 1
(DC136170) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs... 44 6.4 1
(AU216883) Caenorhabditis elegans cDNA clone:yk843c02 : 3' e... 44 6.4 1
(CX923952) JGI_CAAN9647.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 44 6.4 1
(CX920678) JGI_CAAN7901.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 44 6.4 1
(CX913228) JGI_CAAN3883.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 44 6.4 1
(CX901540) JGI_CAAM9767.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 44 6.4 1
(CX895480) JGI_CAAM6411.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 44 6.4 1
(CX805573) JGI_CAAJ17280.fwd NIH_XGC_tropBrn2 Xenopus (Silur... 44 6.4 1
(CX491322) JGI_XZG33762.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 6.4 1
(CX379151) JGI_XZT50893.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 6.4 1
(AL798267) Xenopus tropicalis EST, clone TNeu133c07 5'. 44 6.4 1
(CB394908) OSTR146C10_1 AD-wrmcDNA Caenorhabditis elegans cD... 44 6.4 1
(C38799) Caenorhabditis elegans cDNA clone yk500f9 : 3' end,... 44 6.4 1
(BP833192) Arabidopsis thaliana cDNA clone:RAFL22-95-D05, 5'... 44 6.4 1
(BJ148665) Caenorhabditis elegans cDNA clone:yk1265g10 : 3' ... 44 6.4 1
(FD714164) CAAA18159.fwd CAAA Petromyzon marinus Petromyzon ... 44 6.4 1
(CO897309) CS_gil_02C12_M13Reverse Blue crab gill, normalize... 30 6.7 3
(AC099367) Rattus norvegicus clone CH230-95O1, WORKING DRAFT... 36 6.8 6
(CU915332) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 6.8 3
(DE220364) Trifolium pratense DNA, clone:RCG11433. 34 6.9 2
(BJ330866) Dictyostelium discoideum cDNA clone:dda33d04, 5' ... 34 6.9 3
(BJ365940) Dictyostelium discoideum cDNA clone:ddc37j05, 5' ... 34 6.9 3
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 40 7.0 2
(BJ366293) Dictyostelium discoideum cDNA clone:ddc38a17, 5' ... 34 7.1 3
(AZ594722) 1M0406G19R Mouse 10kb plasmid UUGC1M library Mus ... 36 7.2 2
(DE238440) Trifolium pratense DNA, clone:RCG35896. 38 7.2 2
(BZ831715) CH240_257L24.TV CHORI-240 Bos taurus genomic clon... 34 7.2 2
(BJ366871) Dictyostelium discoideum cDNA clone:ddc40e15, 5' ... 34 7.6 3
(FP085488) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 7.7 2
(CV070818) CS_gil_34F05_M13Reverse Blue crab gill, normalize... 30 7.9 3
(AC224093) Bos taurus clone CH240-450K13, WORKING DRAFT SEQU... 36 7.9 4
(BE440544) sp46g09.y1 Gm-c1043 Glycine max cDNA clone GENOME... 34 8.0 2
(CV070681) CS_gil_32E07_M13Reverse Blue crab gill, normalize... 30 8.4 3
(AZ515619) BMBACR038SP6_NEB Brugia malayi Genomic Bac Librar... 38 8.4 2
(CV527029) CS_GIL_18G07_SP6 Blue crab gill, normalized Calli... 30 8.7 3
(AC179164) Strongylocentrotus purpuratus clone R3-4016E3, WO... 40 8.8 2
(CU468211) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 8.8 2
(DV547337) rbcma0_005360 Chaetomium cupreum mycelium cDNA li... 34 9.1 2
(DV547434) rbcma0_005590 Chaetomium cupreum mycelium cDNA li... 34 9.1 2
(BI067048) pgf1n.pk010.h1 normalized chicken fat cDNA librar... 34 9.3 2
(FB925466) Sequence 144739 from Patent WO2008034648. 38 9.4 2
(CO114222) GR__Eb015D24.r GR__Eb Gossypium raimondii cDNA cl... 38 9.6 2
(FE832716) CCAG44206.g1 CCAG Petrolisthes cinctipes heart, g... 38 9.6 2
(BU798715) SJF2AVG02 SJF Schistosoma japonicum cDNA similar ... 36 9.6 2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 9.8 7
(CG963445) MBENH22TR mth2 Medicago truncatula genomic clone ... 36 9.8 2
(BQ154427) NF069F06IR1F1059 Irradiated Medicago truncatula c... 36 9.8 2
(DH462789) Monosiga ovata DNA, fosmid clone: MOF-002G02, gen... 30 9.9 3

>(AU061886) Dictyostelium discoideum slug cDNA, clone SLG482.
Length = 574

Score = 624 bits (315), Expect(3) = 0.0
Identities = 315/315 (100%)
Strand = Plus / Plus


Query: 1 cattatatttaagaaacaatgctaaatatgccagagccttaaaggattacaatgtttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattatatttaagaaacaatgctaaatatgccagagccttaaaggattacaatgtttcag 60


Query: 61 atacttcattgctaccattcaagagaaatgatatcataactatcacatttaaagatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacttcattgctaccattcaagagaaatgatatcataactatcacatttaaagatcaag 120


Query: 121 agaataaatggttcatgggtcaactcaatggtaaagaaggttcattcccagttgatcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaataaatggttcatgggtcaactcaatggtaaagaaggttcattcccagttgatcatg 180


Query: 181 ttgaaattttattatctgatgtaccaccaccacaaccagttcatccagttgctactttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaattttattatctgatgtaccaccaccacaaccagttcatccagttgctactttat 240


Query: 241 cacccccaatgtcaccaactattccaaacattacaaatactccaccaccaccaccatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacccccaatgtcaccaactattccaaacattacaaatactccaccaccaccaccatcaa 300


Query: 301 ttagtgattcaatgt 315
|||||||||||||||
Sbjct: 301 ttagtgattcaatgt 315

Score = 109 bits (55), Expect(3) = 0.0
Identities = 59/61 (96%)
Strand = Plus / Plus


Query: 360 tcagttatgggttcgnccaaaccaattgaaattccntcattaggtattccaccaccacaa 419
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 360 tcagttatgggttcgaccaaaccaattgaaattccatcattaggtattccaccaccacaa 419


Query: 420 c 420
|
Sbjct: 420 c 420

Score = 95.6 bits (48), Expect(3) = 0.0
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 479 tacaaaattaagtggaagtgtctcaaataaattaaatgtgacatcttc 526
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tacaaaattaagtggaagtgtctcaaataaattaaatgtgacatcttc 526

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 525,147,257
Number of extensions: 35254622
Number of successful extensions: 3863670
Number of sequences better than 10.0: 153
Length of query: 631
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 607
Effective length of database: 99,340,224,878
Effective search space: 60299516500946
Effective search space used: 60299516500946
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Contig-U04139-1Q.Seq.d
(631 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class... 166 7e-40
AC116957_47(AC116957|pid:none) Dictyostelium discoideum chromoso... 166 7e-40
AY814057_1(AY814057|pid:none) Schistosoma japonicum SJCHGC01831 ... 54 4e-06
T18289(T18289) racGAP protein - slime mold (Dictyostelium discoi... 54 5e-06
AF220364_1(AF220364|pid:none) Drosophila melanogaster Plenty of ... 53 8e-06
CR759992_1(CR759992|pid:none) Xenopus tropicalis finished cDNA, ... 52 1e-05
BC084795_1(BC084795|pid:none) Xenopus laevis hypothetical LOC495... 52 1e-05
BC044199_1(BC044199|pid:none) Danio rerio SH3-domain GRB2-like 2... 52 1e-05
(Q6P6R7) RecName: Full=Small G protein signaling modulator 3; Al... 52 2e-05
(Q8VCZ6) RecName: Full=Small G protein signaling modulator 3; Al... 52 2e-05
A44988(A44988)transforming protein (gag-crk) - avian sarcoma vir... 51 2e-05
(Q04929) RecName: Full=Proto-oncogene C-crk; AltName: Full=p38; ... 51 2e-05
AF440203_1(AF440203|pid:none) Synthetic construct Crk-based repo... 51 2e-05
X17292_1(X17292|pid:none) Avian sarcoma virus (ASV-1) crk oncoge... 51 2e-05
(Q8AXV0) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 51 2e-05
A46243(A46243)epidermal growth factor-receptor-binding protein G... 51 3e-05
(Q8K3E5) RecName: Full=Jouberin; AltName: Full=Abelson helper in... 51 3e-05
AK028179_1(AK028179|pid:none) Mus musculus 10 days embryo whole ... 51 3e-05
FJ175657_1(FJ175657|pid:none) Sus scrofa v-crk sarcoma virus CT1... 51 3e-05
(Q64010) RecName: Full=Proto-oncogene C-crk; AltName: Full=p38; ... 51 3e-05
BC055400_1(BC055400|pid:none) Mus musculus Abelson helper integr... 51 3e-05
AK291060_1(AK291060|pid:none) Homo sapiens cDNA FLJ77114 complet... 51 3e-05
FN357377_11(FN357377|pid:none) Schistosoma mansoni genome sequen... 51 3e-05
AK161356_1(AK161356|pid:none) Mus musculus adult male testis cDN... 51 3e-05
AY133241_1(AY133241|pid:none) Mus musculus Ahi-1 isoform I (Ahi-... 51 3e-05
AK076097_1(AK076097|pid:none) Mus musculus 10, 11 days embryo wh... 51 3e-05
A45022(A45022) CRK-II - human &D10656_1(D10656|pid:none) 51 3e-05
AC116984_47(AC116984|pid:none) Dictyostelium discoideum chromoso... 51 3e-05
AY892909_1(AY892909|pid:none) Synthetic construct Homo sapiens c... 51 3e-05
AK139337_1(AK139337|pid:none) Mus musculus 10 days neonate corte... 51 3e-05
AB061674_1(AB061674|pid:none) Synthetic construct gene for Picch... 51 3e-05
(Q62420) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 51 3e-05
(O35179) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 51 3e-05
AK295469_1(AK295469|pid:none) Homo sapiens cDNA FLJ60264 complet... 50 4e-05
(A7A261) RecName: Full=LAS seventeen-binding protein 3; ... 50 4e-05
BC106271_1(BC106271|pid:none) Xenopus laevis hypothetical protei... 50 4e-05
CR858652_1(CR858652|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 50 4e-05
BC127850_1(BC127850|pid:none) Homo sapiens small G protein signa... 50 4e-05
CQ834434_1(CQ834434|pid:none) Sequence 305 from Patent WO2004058... 50 4e-05
AK301042_1(AK301042|pid:none) Homo sapiens cDNA FLJ53213 complet... 50 4e-05
AK293592_1(AK293592|pid:none) Homo sapiens cDNA FLJ54594 complet... 50 5e-05
BC167673_1(BC167673|pid:none) Xenopus tropicalis hypothetical pr... 50 5e-05
(Q2KI13) RecName: Full=Small G protein signaling modulator 3; Al... 50 5e-05
AK293546_1(AK293546|pid:none) Homo sapiens cDNA FLJ53715 complet... 50 5e-05
AY888447_1(AY888447|pid:none) Synthetic construct Homo sapiens c... 50 5e-05
U58886_1(U58886|pid:none) Mus musculus endophilin I mRNA, comple... 50 7e-05
BC012216_1(BC012216|pid:none) Mus musculus v-crk sarcoma virus C... 50 7e-05
(Q8AXU9) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 49 9e-05
(Q99963) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 49 1e-04
(P05433) RecName: Full=P47(GAG-CRK) protein; &Y00302_1(Y00302|p... 49 1e-04
AF036271_1(AF036271|pid:none) Homo sapiens EEN-B2-L3 mRNA, compl... 49 1e-04
BC082699_1(BC082699|pid:none) Xenopus laevis hypothetical LOC494... 49 1e-04
BC129422_1(BC129422|pid:none) Danio rerio cDNA clone MGC:158742 ... 49 2e-04
DQ090887_1(DQ090887|pid:none) Homo sapiens clone DKFZp686J1653 A... 49 2e-04
AB462928_1(AB462928|pid:none) Synthetic construct DNA, clone: pF... 49 2e-04
(Q8N157) RecName: Full=Jouberin; AltName: Full=Abelson helper in... 49 2e-04
(Q62421) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 48 2e-04
U67954_1(U67954|pid:none) Caenorhabditis elegans cosmid F41D9, c... 48 2e-04
BC074540_1(BC074540|pid:none) Xenopus tropicalis v-crk sarcoma v... 48 2e-04
BC027096_1(BC027096|pid:none) Mus musculus SH3-domain GRB2-like ... 48 2e-04
AK012114_1(AK012114|pid:none) Mus musculus 10 days embryo whole ... 48 2e-04
AB008159_1(AB008159|pid:none) Rattus norvegicus mRNA for SH3P13S... 48 3e-04
AF009604_1(AF009604|pid:none) Rattus norvegicus SH3p13 mRNA, par... 48 3e-04
CR380955_381(CR380955|pid:none) Candida glabrata strain CBS138 c... 48 3e-04
CR382121_351(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 48 3e-04
(P46109) RecName: Full=Crk-like protein; &AB463342_1(AB463342|p... 47 3e-04
(A6H8I2) RecName: Full=Small G protein signaling modulator 3 hom... 47 3e-04
CU928179_27(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 47 3e-04
BT025352_1(BT025352|pid:none) Bos taurus SH3-domain GRB2-like 1 ... 47 3e-04
(Q2KJA1) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 47 3e-04
AB178994_1(AB178994|pid:none) Macaca fascicularis testis cDNA cl... 47 3e-04
DQ894444_1(DQ894444|pid:none) Synthetic construct Homo sapiens c... 47 5e-04
AC007292_3(AC007292|pid:none) Homo sapiens chromosome 19, cosmid... 47 5e-04
BC000089_1(BC000089|pid:none) Homo sapiens SH3-domain GRB2-like ... 47 5e-04
AK302273_1(AK302273|pid:none) Homo sapiens cDNA FLJ52941 complet... 47 5e-04
(Q99961) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 47 5e-04
AK167505_1(AK167505|pid:none) Mus musculus 14 days pregnant adul... 47 6e-04
AF304353_1(AF304353|pid:none) Lampetra fluviatilis endophilin SH... 47 6e-04
(O35964) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 47 6e-04
AK154836_1(AK154836|pid:none) Mus musculus NOD-derived CD11c +ve... 47 6e-04
(Q5U2U2) RecName: Full=Crk-like protein; &BC085865_1(BC085865|p... 46 8e-04
AK024085_1(AK024085|pid:none) Homo sapiens cDNA FLJ14023 fis, cl... 46 8e-04
L06795_2(L06795|pid:none) Saccharomyces cerevisiae open reading ... 46 0.001
(P32793) RecName: Full=Protein YSC84; AltName: Full=LAS seventee... 46 0.001
S58352(S58352) SH2/SH3 adaptor protein - mouse &X90648_1(X90648... 46 0.001
(O43125) RecName: Full=Protein csh3; &AB011825_1(AB011825|pid:n... 46 0.001
FN357332_9(FN357332|pid:none) Schistosoma mansoni genome sequenc... 46 0.001
CR382135_646(CR382135|pid:none) Debaryomyces hansenii strain CBS... 46 0.001
AM270199_78(AM270199|pid:none) Aspergillus niger contig An09c010... 45 0.001
CU928180_541(CU928180|pid:none) Kluyveromyces thermotolerans str... 45 0.001
BC080400_1(BC080400|pid:none) Xenopus laevis MGC84382 protein, m... 45 0.002
AF426170_1(AF426170|pid:none) Drosophila melanogaster endophilin... 45 0.002
BC068811_1(BC068811|pid:none) Xenopus laevis hypothetical protei... 45 0.002
BC060379_1(BC060379|pid:none) Xenopus laevis SH2/SH3 adaptor Crk... 45 0.002
BC061315_1(BC061315|pid:none) Xenopus tropicalis v-crk sarcoma v... 45 0.002
BC077276_1(BC077276|pid:none) Xenopus laevis hypothetical protei... 45 0.002
(Q8I1I3) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 45 0.002
BC045483_1(BC045483|pid:none) Danio rerio SH3-domain GRB2-like 3... 45 0.002
BC045942_1(BC045942|pid:none) Danio rerio SH3-domain GRB2-like 1... 45 0.002
BC095864_1(BC095864|pid:none) Danio rerio zgc:113078, mRNA (cDNA... 45 0.002
BX005068_1(BX005068|pid:none) Zebrafish DNA sequence from clone ... 45 0.002
(P87378) RecName: Full=SH2/SH3 adaptor crk; AltName: Full=Adapte... 45 0.002
(Q7S6J4) RecName: Full=Class E vacuolar protein-sorting machiner... 45 0.002
AF067617_4(AF067617|pid:none) Caenorhabditis elegans cosmid T04D... 44 0.003
BC166366_1(BC166366|pid:none) Xenopus tropicalis SH3-domain kina... 44 0.003
AF067617_1(AF067617|pid:none) Caenorhabditis elegans cosmid T04D... 44 0.003
(Q8I1A6) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 44 0.003
AY394006_1(AY394006|pid:none) Caenorhabditis elegans endophilin ... 44 0.003
T33150(T33150)hypothetical protein T04D1.3 - Caenorhabditis eleg... 44 0.003
(Q8R551) RecName: Full=SH3 domain-containing kinase-binding prot... 44 0.004
AK038540_1(AK038540|pid:none) Mus musculus adult male hypothalam... 44 0.004
AF472327_2(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 44 0.004
(O35413) RecName: Full=Sorbin and SH3 domain-containing protein ... 44 0.004
AK033601_1(AK033601|pid:none) Mus musculus adult male cecum cDNA... 44 0.004
AF255886_1(AF255886|pid:none) Rattus norvegicus adapter protein ... 44 0.004
AJ719327_1(AJ719327|pid:none) Gallus gallus mRNA for hypothetica... 44 0.004
AF472327_4(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 44 0.004
(Q5I0D6) RecName: Full=Nostrin; AltName: Full=eNOS trafficking i... 44 0.004
AK140498_1(AK140498|pid:none) Mus musculus 10 days neonate cereb... 44 0.004
AK020782_1(AK020782|pid:none) Mus musculus 0 day neonate thymus ... 44 0.004
(Q8I1C0) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 44 0.004
BC102654_1(BC102654|pid:none) Bos taurus CD2-associated protein,... 44 0.004
AK074234_1(AK074234|pid:none) Homo sapiens cDNA FLJ23654 fis, cl... 44 0.004
AF255888_1(AF255888|pid:none) Rattus norvegicus adapter protein ... 44 0.004
AK029168_1(AK029168|pid:none) Mus musculus 0 day neonate head cD... 44 0.004
(Q925Q9) RecName: Full=SH3 domain-containing kinase-binding prot... 44 0.004
AF255887_1(AF255887|pid:none) Rattus norvegicus adapter protein ... 44 0.004
BC151038_1(BC151038|pid:none) Mus musculus sorbin and SH3 domain... 44 0.004
FM992689_442(FM992689|pid:none) Candida dubliniensis CD36 chromo... 44 0.004
AK083429_1(AK083429|pid:none) Mus musculus 9 days embryo whole b... 44 0.004
(Q8I190) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 44 0.004
BC039163_1(BC039163|pid:none) Mus musculus sorbin and SH3 domain... 44 0.004
(Q3UTJ2) RecName: Full=Sorbin and SH3 domain-containing protein ... 44 0.004
(Q6NRD3) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 44 0.004
BC134725_1(BC134725|pid:none) Bos taurus SH3 domain containing r... 44 0.005
(Q4P5J4) RecName: Full=Class E vacuolar protein-sorting machiner... 44 0.005
AY398419_1(AY398419|pid:none) Danio rerio clone RK101A1F07 SH3-d... 44 0.005
(A4RF61) RecName: Full=Class E vacuolar protein-sorting machiner... 44 0.005
BC166180_1(BC166180|pid:none) Xenopus tropicalis hypothetical pr... 44 0.005
CU633895_130(CU633895|pid:none) Podospora anserina genomic DNA c... 44 0.005
CR855718_1(CR855718|pid:none) Xenopus tropicalis finished cDNA, ... 44 0.005
(Q5RBR0) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 43 0.007
AK021429_1(AK021429|pid:none) Homo sapiens cDNA FLJ11367 fis, cl... 43 0.007
BC052863_1(BC052863|pid:none) Mus musculus SH3-domain kinase bin... 43 0.007
BC053671_1(BC053671|pid:none) Homo sapiens SH3 domain containing... 43 0.007
CU633900_651(CU633900|pid:none) Podospora anserina genomic DNA c... 43 0.007
AK056628_1(AK056628|pid:none) Homo sapiens cDNA FLJ32066 fis, cl... 43 0.007
AB174622_1(AB174622|pid:none) Macaca fascicularis brain cDNA clo... 43 0.007
BC134444_1(BC134444|pid:none) Bos taurus SH3-domain kinase bindi... 43 0.009
AF051353_1(AF051353|pid:none) Acanthamoeba castellanii myosin IC... 43 0.009
CR859070_1(CR859070|pid:none) Pongo abelii mRNA; cDNA DKFZp469E0... 43 0.009
(P10569) RecName: Full=Myosin IC heavy chain; &J02974_1(J02974|... 43 0.009
BC084472_1(BC084472|pid:none) Xenopus tropicalis myosin IF, mRNA... 43 0.009
AL807371_6(AL807371|pid:none) Neurospora crassa DNA linkage grou... 43 0.009
AM393221_1(AM393221|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM393501_1(AM393501|pid:none) Synthetic construct Homo sapiens c... 42 0.011
EU832635_1(EU832635|pid:none) Synthetic construct Homo sapiens c... 42 0.011
BC046842_1(BC046842|pid:none) Xenopus laevis myosin I e, mRNA (c... 42 0.011
BC152821_1(BC152821|pid:none) Synthetic construct Mus musculus c... 42 0.011
AM392656_1(AM392656|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM393012_1(AM393012|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM393706_1(AM393706|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM393834_1(AM393834|pid:none) Synthetic construct Homo sapiens c... 42 0.011
BC011883_1(BC011883|pid:none) Homo sapiens sorbin and SH3 domain... 42 0.011
AM393693_1(AM393693|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM393190_1(AM393190|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AK122245_1(AK122245|pid:none) Mus musculus mRNA for mKIAA0318 pr... 42 0.011
AF230520_1(AF230520|pid:none) Rattus norvegicus SH3 domain-conta... 42 0.011
(O74352) RecName: Full=Protein hob1; AltName: Full=Homolog of Bi... 42 0.011
AM393014_1(AM393014|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AM392985_1(AM392985|pid:none) Synthetic construct Homo sapiens c... 42 0.011
BC148110_1(BC148110|pid:none) Bos taurus sorbin and SH3 domain c... 42 0.011
BC077088_1(BC077088|pid:none) Danio rerio v-crk sarcoma virus CT... 42 0.011
AK296461_1(AK296461|pid:none) Homo sapiens cDNA FLJ53348 complet... 42 0.011
AK056758_1(AK056758|pid:none) Homo sapiens cDNA FLJ32196 fis, cl... 42 0.011
BC114102_1(BC114102|pid:none) Bos taurus sorbin and SH3 domain c... 42 0.011
AM393267_1(AM393267|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AL935282_2(AL935282|pid:none) Zebrafish DNA sequence from clone ... 42 0.011
BC110717_1(BC110717|pid:none) Xenopus laevis myosin I e, mRNA (c... 42 0.011
(Q80U40) RecName: Full=RIMS-binding protein 2; Short=RI... 42 0.011
AF049884_1(AF049884|pid:none) Homo sapiens Arg/Abl-interacting p... 42 0.011
BX546482_10(BX546482|pid:none) Zebrafish DNA sequence from clone... 42 0.011
(Q9JLQ0) RecName: Full=CD2-associated protein; AltName: Full=Mes... 42 0.011
AF085185_1(AF085185|pid:none) Acanthamoeba castellanii Myosin-IA... 42 0.011
BC151100_1(BC151100|pid:none) Mus musculus RIMS binding protein ... 42 0.011
AM393127_1(AM393127|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AF077003_1(AF077003|pid:none) Mus musculus SH3 domain-containing... 42 0.011
AM393172_1(AM393172|pid:none) Synthetic construct Homo sapiens c... 42 0.011
AF329268_1(AF329268|pid:none) Homo sapiens SH3-domain kinase bin... 42 0.015
(Q96B97) RecName: Full=SH3 domain-containing kinase-binding prot... 42 0.015
(Q54CL3) RecName: Full=Probable peroxisomal membrane protein PEX... 42 0.015
A68194_1(A68194|pid:none) Sequence 1 from Patent WO9749808. 42 0.015
CR382128_547(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 42 0.015
AL732327_4(AL732327|pid:none) Human DNA sequence from clone RP11... 42 0.015
CS300519_1(CS300519|pid:none) Sequence 27 from Patent EP1661986. 42 0.015
AF542051_1(AF542051|pid:none) Homo sapiens CD2 binding protein C... 42 0.015
BC095582_1(BC095582|pid:none) Danio rerio zgc:111880, mRNA (cDNA... 42 0.015
CU633901_407(CU633901|pid:none) Podospora anserina genomic DNA c... 42 0.015
BC015806_1(BC015806|pid:none) Homo sapiens SH3-domain kinase bin... 42 0.015
(Q75DS3) RecName: Full=Class E vacuolar protein-sorting machiner... 42 0.015
AL732325_2(AL732325|pid:none) Human DNA sequence from clone RP11... 42 0.015
FN392320_120(FN392320|pid:none) Pichia pastoris GS115 chromosome... 42 0.015
AK173185_1(AK173185|pid:none) Mus musculus mRNA for mKIAA1494 pr... 42 0.019
BX001002_2(BX001002|pid:none) Zebrafish DNA sequence from clone ... 42 0.019
AK304653_1(AK304653|pid:none) Homo sapiens cDNA FLJ54581 complet... 42 0.019
DQ402497_1(DQ402497|pid:none) Homo sapiens nostrin mRNA, complet... 42 0.019
AC116330_30(AC116330|pid:none) Dictyostelium discoideum chromoso... 42 0.019
BC146252_1(BC146252|pid:none) Bos taurus embryonal Fyn-associate... 42 0.019
CU928169_407(CU928169|pid:none) Kluyveromyces thermotolerans str... 42 0.019
BX537102_4(BX537102|pid:none) Zebrafish DNA sequence from clone ... 42 0.019
BX255904_2(BX255904|pid:none) Zebrafish DNA sequence from clone ... 42 0.019
(A5D7F8) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 42 0.019
AK093444_1(AK093444|pid:none) Homo sapiens cDNA FLJ36125 fis, cl... 42 0.019
(Q69ZI1) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 42 0.019
BC041023_1(BC041023|pid:none) Homo sapiens SH3 domain containing... 42 0.019
(A5D8S5) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 42 0.019
BC141794_1(BC141794|pid:none) Danio rerio SH3 multiple domains 2... 42 0.019
U70668_1(U70668|pid:none) Human Fas-ligand associated factor 2 m... 41 0.025
AL158165_8(AL158165|pid:none) Human DNA sequence from clone RP11... 41 0.025
AF330623_1(AF330623|pid:none) Homo sapiens brain R85FL mRNA, com... 41 0.025
BX640814_1(BX640814|pid:none) Homo sapiens mRNA; cDNA DKFZp686N0... 41 0.025
(Q66II3) RecName: Full=Growth factor receptor-bound protein 2; A... 41 0.025
BC125934_1(BC125934|pid:none) Danio rerio si:dkey-9a20.6, mRNA (... 41 0.025
CR759951_10(CR759951|pid:none) Zebrafish DNA sequence from clone... 41 0.025
AM393056_1(AM393056|pid:none) Synthetic construct Homo sapiens c... 41 0.025
NRL(1GBRA) Growth factor receptor-bound protein 2 (grb2, n-termi... 41 0.025
(Q60631) RecName: Full=Growth factor receptor-bound protein 2; A... 41 0.025
AK293237_1(AK293237|pid:none) Homo sapiens cDNA FLJ54612 complet... 41 0.025
D49847_1(D49847|pid:none) Rat mRNA for Ash-s, complete cds. 41 0.025
FN392321_512(FN392321|pid:none) Pichia pastoris GS115 chromosome... 41 0.025
AC117070_15(AC117070|pid:none) Dictyostelium discoideum chromoso... 41 0.025
AB463276_1(AB463276|pid:none) Synthetic construct DNA, clone: pF... 41 0.025
AK304130_1(AK304130|pid:none) Homo sapiens cDNA FLJ53695 complet... 41 0.025
AY890715_1(AY890715|pid:none) Synthetic construct Homo sapiens c... 41 0.025
FN376313_10(FN376313|pid:none) Schistosoma mansoni genome sequen... 41 0.025
AL158165_6(AL158165|pid:none) Human DNA sequence from clone RP11... 41 0.025
L29511_1(L29511|pid:none) Human GRB2 isoform mRNA. 41 0.025
AF136380_1(AF136380|pid:none) Homo sapiens SH3P12 protein mRNA, ... 41 0.025
AF356527_1(AF356527|pid:none) Homo sapiens sorbin and SH3 domain... 41 0.025
AL158165_2(AL158165|pid:none) Human DNA sequence from clone RP11... 41 0.025
AL645852_1(AL645852|pid:none) Mouse DNA sequence from clone RP23... 41 0.025
AJ489942_1(AJ489942|pid:none) Homo sapiens mRNA for c-Cbl associ... 41 0.025
(Q5KFQ8) RecName: Full=Class E vacuolar protein-sorting machiner... 41 0.025
AE017341_341(AE017341|pid:none) Cryptococcus neoformans var. neo... 41 0.025
AB037717_1(AB037717|pid:none) Homo sapiens mRNA for KIAA1296 pro... 41 0.025
AF356525_1(AF356525|pid:none) Homo sapiens sorbin and SH3 domain... 41 0.025
BX005416_2(BX005416|pid:none) Zebrafish DNA sequence from clone ... 41 0.033
CR857305_1(CR857305|pid:none) Pongo abelii mRNA; cDNA DKFZp469L0... 41 0.033
AF114488_1(AF114488|pid:none) Homo sapiens intersectin short iso... 41 0.033
(A8PWF6) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 41 0.033
EF107689_1(EF107689|pid:none) Emericella nidulans AbpA (abpA) ge... 41 0.033
BC170413_1(BC170413|pid:none) Xenopus laevis intersectin, mRNA (... 41 0.033
(O42287) RecName: Full=Intersectin-1; &AF032118_1(AF032118|pid:... 41 0.033
BC083666_1(BC083666|pid:none) Rattus norvegicus sorbin and SH3 d... 41 0.033
AF064243_1(AF064243|pid:none) Homo sapiens intersectin short for... 41 0.033
EU120734_1(EU120734|pid:none) Homo sapiens intersectin 1 long fo... 41 0.033
(Q9R1Z8) RecName: Full=Vinexin; AltName: Full=Sorbin and SH3 dom... 41 0.033
(Q557J6) RecName: Full=Drebrin-like protein; AltName: Full=Actin... 41 0.033
EU120735_1(EU120735|pid:none) Homo sapiens intersectin 1 short f... 41 0.033
U89775_1(U89775|pid:none) Xenopus laevis SH2/SH3 adaptor Grb2 (G... 41 0.033
U61166_1(U61166|pid:none) Human SH3 domain-containing protein SH... 41 0.033
BC085549_1(BC085549|pid:none) Danio rerio zgc:103549, mRNA (cDNA... 41 0.033
AL606751_2(AL606751|pid:none) Zebrafish DNA sequence from clone ... 41 0.033
AB190911_1(AB190911|pid:none) Mus musculus mRNA for vinexin-g, c... 41 0.033
EU117382_1(EU117382|pid:none) Homo sapiens intersectin 1 long fo... 41 0.033
AB174135_1(AB174135|pid:none) Macaca fascicularis brain cDNA clo... 41 0.033
BC010146_1(BC010146|pid:none) Homo sapiens sorbin and SH3 domain... 41 0.033
EU120733_1(EU120733|pid:none) Homo sapiens intersectin 1 long fo... 41 0.033
DQ340865_1(DQ340865|pid:none) Homo sapiens intersectin 1 short f... 41 0.033
(Q09746) RecName: Full=Uncharacterized protein C12C2.05c; &CU32... 41 0.033
AF064244_1(AF064244|pid:none) Homo sapiens intersectin long form... 41 0.033
(P87379) RecName: Full=Growth factor receptor-bound protein 2-A;... 41 0.033
BC105355_1(BC105355|pid:none) Bos taurus hypothetical LOC508470,... 41 0.033
(Q15811) RecName: Full=Intersectin-1; AltName: Full=SH3 domain-c... 41 0.033
EU140800_1(EU140800|pid:none) Homo sapiens intersectin 1 short f... 41 0.033
DQ679754_1(DQ679754|pid:none) Homo sapiens intersectin 1 short f... 41 0.033
BX005416_1(BX005416|pid:none) Zebrafish DNA sequence from clone ... 41 0.033
BC163472_1(BC163472|pid:none) Danio rerio Abelson helper integra... 40 0.042
BC013361_1(BC013361|pid:none) Homo sapiens vav 1 guanine nucleot... 40 0.042
AK313307_1(AK313307|pid:none) Homo sapiens cDNA, FLJ93820, highl... 40 0.042
TVHUVV(B39576;S05382)transforming protein vav - human (fragments) 40 0.042
AL117204_39(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 40 0.042
T31504(T31504)hypothetical protein Y116A8C.36 - Caenorhabditis e... 40 0.042
(A6QLK6) RecName: Full=GRB2-related adapter protein; &BC147998_... 40 0.042
(Q6FN49) RecName: Full=Class E vacuolar protein-sorting machiner... 40 0.042
(P15498) RecName: Full=Proto-oncogene vav; &AF030227_1(AF030227... 40 0.042
BX511269_1(BX511269|pid:none) Zebrafish DNA sequence from clone ... 40 0.042
BC072737_1(BC072737|pid:none) Xenopus laevis MGC79086 protein, m... 40 0.042
BT059192_1(BT059192|pid:none) Salmo salar clone ssal-rgf-531-235... 40 0.042
AM270339_10(AM270339|pid:none) Aspergillus niger contig An15c012... 40 0.042
AL645647_6(AL645647|pid:none) Mouse DNA sequence from clone RP23... 40 0.042
AK301128_1(AK301128|pid:none) Homo sapiens cDNA FLJ53479 complet... 40 0.042
AM393034_1(AM393034|pid:none) Synthetic construct Homo sapiens c... 40 0.042
X16316_1(X16316|pid:none) Human mRNA for vav oncogene. 40 0.042
AE014135_43(AE014135|pid:none) Drosophila melanogaster chromosom... 40 0.055
AB098164_1(AB098164|pid:none) Monosiga ovata MoPTK-w mRNA for pr... 40 0.055
(Q4WHP5) RecName: Full=Class E vacuolar protein-sorting machiner... 40 0.055
(Q5BBL4) RecName: Full=Class E vacuolar protein-sorting machiner... 40 0.055
(Q1E878) RecName: Full=Class E vacuolar protein-sorting machiner... 40 0.055
AY205155_1(AY205155|pid:none) Rattus norvegicus CD2AP/CMS mRNA, ... 40 0.055
U97407_8(U97407|pid:none) Caenorhabditis elegans cosmid C34G6, c... 40 0.072
(Q0CJU8) RecName: Full=Class E vacuolar protein-sorting machiner... 40 0.072
AJ720324_1(AJ720324|pid:none) Gallus gallus mRNA for hypothetica... 40 0.072
BT081515_1(BT081515|pid:none) Rana catesbeiana clone rcat-evr-51... 40 0.072
AF521593_1(AF521593|pid:none) Mus musculus c-Cbl associated prot... 40 0.072
BC012703_1(BC012703|pid:none) Mus musculus sorbin and SH3 domain... 40 0.072
FJ594436_1(FJ594436|pid:none) Salmo salar NADPH oxidase cytosoli... 40 0.072
G87789(G87789)protein C34G6.7 [imported] - Caenorhabditis elegans 40 0.072
(Q07883) RecName: Full=Growth factor receptor-bound protein 2; A... 40 0.072
BC059450_1(BC059450|pid:none) Danio rerio growth factor receptor... 40 0.072
AF030131_1(AF030131|pid:none) Mus musculus Plenty of SH3s (POSH)... 40 0.072
U58883_1(U58883|pid:none) Mus musculus c-Cbl associated protein ... 40 0.072
AB058751_1(AB058751|pid:none) Homo sapiens mRNA for KIAA1848 pro... 39 0.095
AL954388_10(AL954388|pid:none) Mouse DNA sequence from clone RP2... 39 0.095
(Q08DK5) RecName: Full=Endophilin-B2; AltName: Full=SH3 domain-c... 39 0.095
AP007164_582(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.095
BT058722_1(BT058722|pid:none) Salmo salar clone ssal-rgf-001-079... 39 0.095
(P19706) RecName: Full=Myosin heavy chain IB; AltName: Full=Myos... 39 0.095
(Q9NR46) RecName: Full=Endophilin-B2; AltName: Full=SH3 domain-c... 39 0.095
FM992688_692(FM992688|pid:none) Candida dubliniensis CD36 chromo... 39 0.095
MWAXIB(JQ0095;B34448)myosin heavy chain IB - Acanthamoeba castel... 39 0.095
BC087652_1(BC087652|pid:none) Rattus norvegicus SH3-domain GRB2-... 39 0.095
AX443531_1(AX443531|pid:none) Sequence 18 from Patent WO0224739.... 39 0.095
AL954388_13(AL954388|pid:none) Mouse DNA sequence from clone RP2... 39 0.095
AB384306_1(AB384306|pid:none) Synthetic construct DNA, clone: pF... 39 0.095
(Q6CVE9) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 39 0.095
BC049513_1(BC049513|pid:none) Danio rerio SH3-domain GRB2-like 1... 39 0.095
(Q8R3V5) RecName: Full=Endophilin-B2; AltName: Full=SH3 domain-c... 39 0.095
AF370433_1(AF370433|pid:none) Homo sapiens PP9455 mRNA, complete... 39 0.095
AF258589_1(AF258589|pid:none) Homo sapiens PP578 mRNA, complete ... 39 0.095
AB384587_1(AB384587|pid:none) Synthetic construct DNA, clone: pF... 39 0.12
AF248540_1(AF248540|pid:none) Homo sapiens intersectin 2 (SH3D1B... 39 0.12
BC146779_1(BC146779|pid:none) Homo sapiens intersectin 2, mRNA (... 39 0.12
EU025708_9(EU025708|pid:none) Salmo salar EAP30 subunit of ELL c... 39 0.12
DQ214657_1(DQ214657|pid:none) Taeniopygia guttata clone 0058P004... 39 0.12
AF053957_1(AF053957|pid:none) Drosophila melanogaster dynamin as... 39 0.12
AL731780_5(AL731780|pid:none) Mouse DNA sequence from clone RP23... 39 0.12
AC116986_64(AC116986|pid:none) Dictyostelium discoideum chromoso... 39 0.12
BT024977_1(BT024977|pid:none) Drosophila melanogaster IP14822 fu... 39 0.12
AY812038_1(AY812038|pid:none) Schistosoma japonicum SJCHGC01829 ... 39 0.12
AY812778_1(AY812778|pid:none) Schistosoma japonicum clone SJCHGC... 39 0.12
AF182199_1(AF182199|pid:none) Homo sapiens intersectin 2 short i... 39 0.12
(Q6WKZ7) RecName: Full=Nostrin; AltName: Full=eNOS trafficking i... 39 0.12
DQ307286_1(DQ307286|pid:none) Homo sapiens plenty of SH3s-2 (POS... 39 0.12
(Q9NZM3) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 39 0.12
AB033082_1(AB033082|pid:none) Homo sapiens mRNA for KIAA1256 pro... 39 0.12
AF001630_1(AF001630|pid:none) Homo sapiens SH3P18-like WASP asso... 39 0.12
BC074140_1(BC074140|pid:none) Xenopus laevis MGC81877 protein, m... 39 0.12
(Q8TEJ3) RecName: Full=SH3 domain-containing RING finger protein... 39 0.12
AE014134_3450(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.12
(Q9JIR1) RecName: Full=RIMS-binding protein 2; Short=RI... 39 0.16
(O94885) RecName: Full=SAM and SH3 domain-containing protein 1; ... 39 0.16
A33284(A33284) myosin heavy chain IB - slime mold (Dictyostelium... 39 0.16
AB018333_1(AB018333|pid:none) Homo sapiens mRNA for KIAA0790 pro... 39 0.16
AF199336_1(AF199336|pid:none) Rattus norvegicus RIM binding prot... 39 0.16
U61167_1(U61167|pid:none) Human SH3 domain-containing protein SH... 39 0.16
(Q96JP2) RecName: Full=Putative myosin-XVB; AltName: Full=Unconv... 39 0.16
AE014296_19(AE014296|pid:none) Drosophila melanogaster chromosom... 39 0.16
BC063279_1(BC063279|pid:none) Homo sapiens SAM and SH3 domain co... 39 0.16
AB463240_1(AB463240|pid:none) Synthetic construct DNA, clone: pF... 39 0.16
(Q9JK48) RecName: Full=Endophilin-B1; AltName: Full=SH3 domain-c... 39 0.16
AE016816_470(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 39 0.16
AF272946_1(AF272946|pid:none) Mus musculus endophilin B1b mRNA, ... 39 0.16
AE014296_20(AE014296|pid:none) Drosophila melanogaster chromosom... 39 0.16
AF064260_1(AF064260|pid:none) Strongylocentrotus purpuratus SRC8... 38 0.21
CR788310_2(CR788310|pid:none) Zebrafish DNA sequence from clone ... 38 0.21
AE017346_249(AE017346|pid:none) Cryptococcus neoformans var. neo... 38 0.21
BC141790_1(BC141790|pid:none) Danio rerio hypothetical protein L... 38 0.21
AY812564_1(AY812564|pid:none) Schistosoma japonicum SJCHGC04407 ... 38 0.21
AL032631_15(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6... 38 0.21
BC076759_1(BC076759|pid:none) Xenopus laevis hypothetical protei... 38 0.21
FN392321_1185(FN392321|pid:none) Pichia pastoris GS115 chromosom... 38 0.28
U80955_10(U80955|pid:none) Caenorhabditis elegans cosmid T04C9, ... 38 0.28
AB192469_1(AB192469|pid:none) Oncorhynchus mykiss p67phox mRNA f... 38 0.28
BT059079_1(BT059079|pid:none) Salmo salar clone ssal-rgf-524-098... 38 0.28
AL392107_2(AL392107|pid:none) Human DNA sequence from clone RP11... 38 0.28
T29005(T29005)hypothetical protein ZK328.3 - Caenorhabditis eleg... 38 0.28
BX571674_4(BX571674|pid:none) Zebrafish DNA sequence from clone ... 37 0.36
AB463232_1(AB463232|pid:none) Synthetic construct DNA, clone: pF... 37 0.36
AY383729_1(AY383729|pid:none) Mus musculus TUBA mRNA, complete c... 37 0.36
(Q91X43) RecName: Full=SH3 domain-containing protein 19; AltName... 37 0.36
FN357301_47(FN357301|pid:none) Schistosoma mansoni genome sequen... 37 0.36
BX641152_1(BX641152|pid:none) Homo sapiens mRNA; cDNA DKFZp686I1... 37 0.36
BC077503_1(BC077503|pid:none) Xenopus laevis sorting nexin assoc... 37 0.36
(Q6AYE2) RecName: Full=Endophilin-B1; AltName: Full=SH3 domain-c... 37 0.36
BC160597_1(BC160597|pid:none) Xenopus tropicalis hypothetical pr... 37 0.36
AF257318_1(AF257318|pid:none) Homo sapiens SH3-containing protei... 37 0.36
AF263293_1(AF263293|pid:none) Homo sapiens endophilin B1 mRNA, c... 37 0.36
AK303710_1(AK303710|pid:none) Homo sapiens cDNA FLJ50346 complet... 37 0.36
AB179471_1(AB179471|pid:none) Macaca fascicularis testis cDNA cl... 37 0.36
(Q8QFX1) RecName: Full=RIMS-binding protein 2; Short=RI... 37 0.36
AC117075_43(AC117075|pid:none) Dictyostelium discoideum chromoso... 37 0.36
BC031117_1(BC031117|pid:none) Mus musculus SH3 domain protein D1... 37 0.36
AB002316_1(AB002316|pid:none) Human mRNA for KIAA0318 gene, part... 37 0.36
(Q6TXD4) RecName: Full=Dynamin-binding protein; AltName: Full=Sc... 37 0.36
AB007960_1(AB007960|pid:none) Homo sapiens KIAA0491 mRNA, partia... 37 0.36
AB290331_1(AB290331|pid:none) Cyprinus carpio p67phox mRNA for n... 37 0.47
BC095818_1(BC095818|pid:none) Danio rerio zgc:112450, mRNA (cDNA... 37 0.47
BC153241_1(BC153241|pid:none) Bos taurus protein kinase C and ca... 37 0.47
BT059454_1(BT059454|pid:none) Salmo salar clone ssal-rgf-501-329... 37 0.47
(Q13588) RecName: Full=GRB2-related adapter protein; &AY888503_... 37 0.47
(O13154) RecName: Full=Protein kinase C and casein kinase substr... 37 0.47
(A7MBI0) RecName: Full=Protein kinase C and casein kinase substr... 37 0.47
AB287408_1(AB287408|pid:none) Xenopus laevis XPLCG1a mRNA for ph... 37 0.47
AY891149_1(AY891149|pid:none) Synthetic construct Homo sapiens c... 37 0.47
BT059082_1(BT059082|pid:none) Salmo salar clone ssal-rgf-524-113... 37 0.47
AE014134_3331(AE014134|pid:none) Drosophila melanogaster chromos... 37 0.61
AM920431_119(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 37 0.61
BT082080_1(BT082080|pid:none) Drosophila melanogaster GH28580 fu... 37 0.61
AM270227_6(AM270227|pid:none) Aspergillus niger contig An11c0100... 37 0.61
T23612(T23612)hypothetical protein K11E4.4 - Caenorhabditis eleg... 37 0.61
BC149101_1(BC149101|pid:none) Bos taurus hypothetical LOC504513,... 37 0.61
AL022476_4(AL022476|pid:none) Human DNA sequence from clone RP3-... 37 0.61
CP000496_452(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 37 0.61
Z70211_5(Z70211|pid:none) Caenorhabditis elegans Cosmid K11E4, c... 37 0.61
BC148361_1(BC148361|pid:none) Synthetic construct Mus musculus c... 37 0.61
AE014296_1697(AE014296|pid:none) Drosophila melanogaster chromos... 37 0.61
AJ224676_1(AJ224676|pid:none) Drosophila melanogaster mRNA for r... 37 0.61
(Q9UNF0) RecName: Full=Protein kinase C and casein kinase substr... 37 0.61
BT066322_1(BT066322|pid:none) Drosophila melanogaster MIP06439 f... 37 0.61
DQ896161_1(DQ896161|pid:none) Synthetic construct Homo sapiens c... 37 0.61
(P38753) RecName: Full=Class E vacuolar protein-sorting machiner... 36 0.80
AY730462_1(AY730462|pid:none) Danio rerio cortactin isoform F mR... 36 0.80
AM270061_75(AM270061|pid:none) Aspergillus niger contig An03c020... 36 0.80
CR956640_6(CR956640|pid:none) Pig DNA sequence from clone CH242-... 36 0.80
(Q4R729) RecName: Full=SH3 domain-containing protein C1orf113 ho... 36 0.80
(Q5ZJ81) RecName: Full=Endophilin-B2; AltName: Full=SH3 domain-c... 36 0.80
BC143969_1(BC143969|pid:none) Homo sapiens vav 3 guanine nucleot... 36 0.80
(Q64355) RecName: Full=Embryonal Fyn-associated substrate; AltNa... 36 0.80
BC079736_1(BC079736|pid:none) Xenopus laevis MGC84055 protein, m... 36 0.80
T26940(T26940)hypothetical protein Y45F10D.13 - Caenorhabditis e... 36 0.80
AY119287_1(AY119287|pid:none) Drosophila melanogaster SD28142 fu... 36 0.80
AK030321_1(AK030321|pid:none) Mus musculus 11 days pregnant adul... 36 0.80
AK304088_1(AK304088|pid:none) Homo sapiens cDNA FLJ54045 complet... 36 0.80
(Q45FX5) RecName: Full=Protein vav-1; &DQ136172_1(DQ136172|pid:... 36 0.80
AF118886_1(AF118886|pid:none) Homo sapiens VAV-3 protein beta is... 36 0.80
AK297015_1(AK297015|pid:none) Homo sapiens cDNA FLJ58582 complet... 36 0.80
AK300474_1(AK300474|pid:none) Homo sapiens cDNA FLJ54061 complet... 36 0.80
(Q9UKW4) RecName: Full=Guanine nucleotide exchange factor VAV3; ... 36 0.80
(Q6CVA8) RecName: Full=Class E vacuolar protein-sorting machiner... 36 0.80
AL513206_2(AL513206|pid:none) Human DNA sequence from clone RP11... 36 0.80
U23520_5(U23520|pid:none) Caenorhabditis elegans cosmid C35B8, c... 36 0.80
BT045856_1(BT045856|pid:none) Salmo salar clone ssal-rgf-534-332... 36 0.80
(Q6BNP6) RecName: Full=Class E vacuolar protein-sorting machiner... 36 0.80
FN357303_47(FN357303|pid:none) Schistosoma mansoni genome sequen... 36 0.80
AK294654_1(AK294654|pid:none) Homo sapiens cDNA FLJ50500 complet... 36 1.0
AL808129_2(AL808129|pid:none) Zebrafish DNA sequence from clone ... 36 1.0
AY069438_1(AY069438|pid:none) Drosophila melanogaster LD14917 fu... 36 1.0
AB174658_1(AB174658|pid:none) Macaca fascicularis brain cDNA clo... 36 1.0
(Q9BY11) RecName: Full=Protein kinase C and casein kinase substr... 36 1.0
BX255972_4(BX255972|pid:none) Human DNA sequence from clone RP11... 36 1.0
AK316103_1(AK316103|pid:none) Homo sapiens cDNA, FLJ79002 comple... 36 1.0
(Q13625) RecName: Full=Apoptosis-stimulating of p53 protein 2; A... 36 1.0
AL022322_3(AL022322|pid:none) Human DNA sequence from clone CTA-... 36 1.0
BT011332_1(BT011332|pid:none) Drosophila melanogaster SD18415 fu... 36 1.0
(Q9V3Z6) RecName: Full=Myosin-VIIa; Short=DmVIIa; AltNa... 36 1.0
BC040247_1(BC040247|pid:none) Homo sapiens tumor protein p53 bin... 36 1.0
AK158686_1(AK158686|pid:none) Mus musculus visual cortex cDNA, R... 36 1.0
(Q9Z0W5) RecName: Full=Protein kinase C and casein kinase substr... 36 1.0
BC015619_1(BC015619|pid:none) Homo sapiens BAI1-associated prote... 36 1.0
FN392320_986(FN392320|pid:none) Pichia pastoris GS115 chromosome... 36 1.0
AP007162_207(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 36 1.0
BC068831_1(BC068831|pid:none) Xenopus laevis phospholipase C-gam... 35 1.4
EF043893_1(EF043893|pid:none) Synthetic construct clone ATCC 106... 35 1.4
AK147053_1(AK147053|pid:none) Mus musculus 17 days embryo stomac... 35 1.4
CR382138_1114(CR382138|pid:none) Debaryomyces hansenii strain CB... 35 1.4
(Q80Y61) RecName: Full=Brain-specific angiogenesis inhibitor 1-a... 35 1.4
AL671987_2(AL671987|pid:none) Mouse DNA sequence from clone RP23... 35 1.4
BC093196_1(BC093196|pid:none) Danio rerio zgc:112091, mRNA (cDNA... 35 1.4
AM920437_1543(AM920437|pid:none) Penicillium chrysogenum Wiscons... 35 1.4
DQ341373_1(DQ341373|pid:none) Siniperca chuatsi p67phox (p67phox... 35 1.4
BC091791_1(BC091791|pid:none) Danio rerio sorbin and SH3 domain ... 35 1.4
BC030586_1(BC030586|pid:none) Homo sapiens signal transducing ad... 35 1.4
(O35177) RecName: Full=Enhancer of filamentation 1; Sho... 35 1.8
BT044041_1(BT044041|pid:none) Salmo salar clone HM6_0740 nebulin... 35 1.8
AK054179_1(AK054179|pid:none) Mus musculus 2 days pregnant adult... 35 1.8
AC024763_4(AC024763|pid:none) Caenorhabditis elegans cosmid Y39A... 35 1.8
AK170726_1(AK170726|pid:none) Mus musculus NOD-derived CD11c +ve... 35 1.8
(Q7ZXQ9) RecName: Full=Drebrin-like protein A; &BC044296_1(BC04... 35 1.8
AK030985_1(AK030985|pid:none) Mus musculus adult male thymus cDN... 35 1.8
(P39743) RecName: Full=Reduced viability upon starvation protein... 35 1.8
AF104246_1(AF104246|pid:none) Gallus gallus enhancer of filament... 35 1.8
AL833787_4(AL833787|pid:none) Mouse DNA sequence from clone RP23... 35 1.8
BC085812_1(BC085812|pid:none) Rattus norvegicus neural precursor... 35 1.8
BC162101_1(BC162101|pid:none) Danio rerio sorting nexin 18b, mRN... 35 1.8
BC005022_1(BC005022|pid:none) Homo sapiens sorting nexin 9, mRNA... 35 1.8
AK033729_1(AK033729|pid:none) Mus musculus adult male cecum cDNA... 35 1.8
AF527956_1(AF527956|pid:none) Danio rerio cortactin mRNA, comple... 35 1.8
BC081365_1(BC081365|pid:none) Xenopus tropicalis MGC89895 protei... 35 1.8
BC074079_1(BC074079|pid:none) Danio rerio zgc:91835, mRNA (cDNA ... 35 1.8
CP000496_677(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 35 1.8
AF009366_1(AF009366|pid:none) Mus musculus neural precursor cell... 35 1.8
BC129976_1(BC129976|pid:none) Mus musculus Cas scaffolding prote... 35 1.8
(O43281) RecName: Full=Embryonal Fyn-associated substrate; AltNa... 35 1.8
BC084281_1(BC084281|pid:none) Xenopus laevis hypothetical LOC495... 35 1.8
(Q9Y5X1) RecName: Full=Sorting nexin-9; AltName: Full=SH3 and PX... 35 1.8
AE014298_2302(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.3
FM992695_111(FM992695|pid:none) Candida dubliniensis CD36 chromo... 35 2.3
X62852_1(X62852|pid:none) H.sapiens ash mRNA. 35 2.3
AF139493_1(AF139493|pid:none) Rattus norvegicus syndapin IIab mR... 35 2.3

>(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class VII
unconventional myosin; AltName: Full=DdMVII;
Short=DdM7; &A59249(A59249) &L35321_1(L35321|pid:none)
Length = 2357

Score = 166 bits (419), Expect = 7e-40
Identities = 79/79 (100%), Positives = 79/79 (100%)
Frame = +3

Query: 3 LYLRNNAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV 182
LYLRNNAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV
Sbjct: 1614 LYLRNNAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV 1673

Query: 183 EILLSDVPPPQPVHPVATL 239
EILLSDVPPPQPVHPVATL
Sbjct: 1674 EILLSDVPPPQPVHPVATL 1692

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 595,610,700
Number of extensions: 8245738
Number of successful extensions: 24214
Number of sequences better than 10.0: 658
Number of HSP's gapped: 24090
Number of HSP's successfully gapped: 731
Length of query: 210
Length of database: 1,061,185,681
Length adjustment: 123
Effective length of query: 87
Effective length of database: 659,166,577
Effective search space: 57347492199
Effective search space used: 57347492199
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.59 gvh: 0.24 alm: 0.53 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
44.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U04139-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0