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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04257-1
Contig ID Contig-U04257-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U04257-1 (Contig-U04257-1Q) /CSM_Contig/Contig-U04257-1Q.Seq.d
GTGCTGTTTTATACATATAATTATATAAAAATTAAAATGATCTCAAGAGT
ATCACTCAATAAATGTTTTTCAACTTTATCAAAGTTAAAGTGCAACAACA
ATACATTATATAGCACTCGTTTATTCACAACAGAACCAGAAAAAGTTAAC
CTTAAACTTACCACAATTGAAAATGGTAAATCCTCAACAGAAGTTGCTGA
TTTAGTCGAAAGAATCTCAAAACTTTCCATTTTGGACGTTATGGATTTAA
CCCAACATTTACAAAAAAAATTAAGTATTCCAGATATTGATCTTTCCAGT
CTCGGTTCAGGTGCCCCAGCAGGTGGAGCTGCCCCAGCTGCCGCTGCTGC
ACCAGCCGCTGTTGCCAAAACAGATTTCCAAGTTAGACTCGTTAAAGTAC
CAGATGGTGCCAAATATAAGATTATTAAAGAATTAAGAGAAGTCAAACCA
TCACTCAGTTTAATGGAAACTAAAGGTCTCGTTGAAAAGATTCCTTCAGT
TATTGCCGATAAAGTTTCAAAAGAAGAAGCAGAAAAGATTATTGCTAAAT
TAAAGGCTTCTGGTGCTGAACTTGAAATGGCTTAAATTATATAAAAAAAA
AAAAAAAAAA
Gap no gap
Contig length 610
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4644322
End point 4643712
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U04257
List of clone(s) 

est1=SLJ383F,1,293
est2=SSJ606E,1,611
est3=SLJ383Z,322,595
Translated Amino Acid sequence 
VLFYTYNYIKIKMISRVSLNKCFSTLSKLKCNNNTLYSTRLFTTEPEKVNLKLTTIENGK
SSTEVADLVERISKLSILDVMDLTQHLQKKLSIPDIDLSSLGSGAPAGGAAPAAAAAPAA
VAKTDFQVRLVKVPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSKEEAEKI
IAKLKASGAELEMA*ii*kkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
VLFYTYNYIKIKMISRVSLNKCFSTLSKLKCNNNTLYSTRLFTTEPEKVNLKLTTIENGK
SSTEVADLVERISKLSILDVMDLTQHLQKKLSIPDIDLSSLGSGAPAGGAAPAAAAAPAA
VAKTDFQVRLVKVPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSKEEAEKI
IAKLKASGAELEMA*ii*kkkkk


Frame B:
ccfihiii*klk*sqeyhsinvfqlyqs*sattihyialvysqqnqkkltlnlpqlkmvn
pqqklli*skesqnfpfwtlwi*pniykkn*vfqilifpvsvqvpqqvelpqlpllhqpl
lpkqiskldslkyqmvpnirllkn*eksnhhsv*wklkvslkrflqllpikfqkkkqkrl
lln*rllvlnlkwlklykkkkkk


Frame C:
avlyi*lykn*ndlksitq*mffnfikvkvqqqyii*hsfihnrtrks*p*tyhn*kw*i
lnrsc*fsrknlktfhfgrygfnptftkkikysry*sfqsrfrcpsrwscpscrcctsrc
cqnrfps*tr*strwcqi*dy*rikrsqtitqfngn*rsr*kdsfsycr*sfkrrsrkdy
c*ikgfwc*t*nglnyikkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04257-1 (Contig-U04257-1Q)
/CSM_Contig/Contig-U04257-1Q.Seq.d
         (610 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04257-1 (Contig-U04257-1Q) /CSM_Contig/Conti...  1126  0.0
Contig-U14854-1 (Contig-U14854-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U10820-1 (Contig-U10820-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U06982-1 (Contig-U06982-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U08426-1 (Contig-U08426-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U05805-1 (Contig-U05805-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U03709-1 (Contig-U03709-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U01424-1 (Contig-U01424-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U00515-1 (Contig-U00515-1Q) /CSM_Contig/Conti...    36  0.043
Contig-U11851-1 (Contig-U11851-1Q) /CSM_Contig/Conti...    34  0.17

>Contig-U04257-1 (Contig-U04257-1Q) /CSM_Contig/Contig-U04257-1Q.Seq.d
          Length = 610

 Score = 1126 bits (568), Expect = 0.0
 Identities = 584/592 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgctgttttatacatataattatataaaaattaaaatgatctcaagagtatcactcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtgctgttttatacatataattatataaaaattaaaatgatctcaagagtatcactcaat 60

                                                                       
Query: 61  aaatgtttttcaactttatcaaagttaaagtgcaacaacaatacattatatagcactcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaatgtttttcaactttatcaaagttaaagtgcaacaacaatacattatatagcactcgt 120

                                                                       
Query: 121 ttattcacaacagaaccagaaaaagttaaccttaaacttaccacaattgaaaatggtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttattcacaacagaaccagaaaaagttaaccttaaacttaccacaattgaaaatggtaaa 180

                                                                       
Query: 181 tcctcaacagaagttgctgatttagtcgaaagaatctcaaaactttccattttggacgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctcaacagaagttgctgatttagtcgaaagaatctcaaaactttccattttggacgtt 240

                                                                       
Query: 241 atggatttaacccaacatttacnnnnnnnnttaagtattccagatattgatctttccagt 300
           ||||||||||||||||||||||        ||||||||||||||||||||||||||||||
Sbjct: 241 atggatttaacccaacatttacaaaaaaaattaagtattccagatattgatctttccagt 300

                                                                       
Query: 301 ctcggttcaggtgccccagcaggtggagctgccccagctgccgctgctgcaccagccgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcggttcaggtgccccagcaggtggagctgccccagctgccgctgctgcaccagccgct 360

                                                                       
Query: 361 gttgccaaaacagatttccaagttagactcgttaaagtaccagatggtgccaaatataag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgccaaaacagatttccaagttagactcgttaaagtaccagatggtgccaaatataag 420

                                                                       
Query: 421 attattaaagaattaagagaagtcaaaccatcactcagtttaatggaaactaaaggtctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attattaaagaattaagagaagtcaaaccatcactcagtttaatggaaactaaaggtctc 480

                                                                       
Query: 481 gttgaaaagattccttcagttattgccgataaagtttcaaaagaagaagcagaaaagatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttgaaaagattccttcagttattgccgataaagtttcaaaagaagaagcagaaaagatt 540

                                                               
Query: 541 attgctaaattaaaggcttctggtgctgaacttgaaatggcttaaattatat 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attgctaaattaaaggcttctggtgctgaacttgaaatggcttaaattatat 592


>Contig-U14854-1 (Contig-U14854-1Q) /CSM_Contig/Contig-U14854-1Q.Seq.d
          Length = 417

 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 328 gctgccccagctgccgctgctgcaccag 355
           ||||||||||||||||||||||| ||||
Sbjct: 234 gctgccccagctgccgctgctgctccag 261


>Contig-U10820-1 (Contig-U10820-1Q) /CSM_Contig/Contig-U10820-1Q.Seq.d
          Length = 1642

 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   aattatataaaaattaaaa 37
            |||||||||||||||||||
Sbjct: 1430 aattatataaaaattaaaa 1448


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7750
Number of Sequences: 6905
Number of extensions: 7750
Number of successful extensions: 891
Number of sequences better than 10.0: 105
length of query: 610
length of database: 5,674,871
effective HSP length: 16
effective length of query: 594
effective length of database: 5,564,391
effective search space: 3305248254
effective search space used: 3305248254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.14
Homology vs DNA 
Query= Contig-U04257-1 (Contig-U04257-1Q) /CSM_Contig/Contig-U04257-1Q.Seq.d
         (610 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...   638   0.0    3
(C90673) Dictyostelium discoideum slug cDNA, clone SSJ606.        638   0.0    2
(AU060352) Dictyostelium discoideum slug cDNA, clone SLJ383.      519   e-150  2
(AU053676) Dictyostelium discoideum slug cDNA, clone SLJ383.      537   e-148  1
(AU074136) Dictyostelium discoideum slug cDNA, clone SSJ606.      476   e-130  1
(EV413616) Dari\anon-EST:Kelleher498 Drosophila arizonae fem...    38   4e-04  2
(AU228089) Arabidopsis thaliana cDNA clone:RAFL15-46-J17, 3'...    54   0.006  1
(BP655306) Arabidopsis thaliana cDNA clone:RAFL19-20-M11, 3'...    54   0.006  1
(BP636587) Arabidopsis thaliana cDNA clone:RAFL19-01-B02, 3'...    54   0.006  1
(BP593382) Arabidopsis thaliana cDNA clone:RAFL15-21-O05, 3'...    54   0.006  1
(DU917688) 336350 Tomato EcoRI BAC Library Solanum lycopersi...    48   0.018  2
(EJ605681) 1092962005949 Global-Ocean-Sampling_GS-29-01-01-1...    52   0.025  1
(EJ284364) 1095368009357 Global-Ocean-Sampling_GS-27-01-01-1...    52   0.025  1
(CN941108) 010917AVBC020023PG (AVBC) Royal Gala young shoot ...    44   0.041  2
(AF362474) Arabidopsis thaliana Ler glycine-rich protein gen...    46   0.063  2
(AC125124) Mus musculus BAC clone RP24-273N19 from chromosom...    50   0.067  4
(EB605108) AGENCOURT_54965062 D. mojavensis EST Drosophila m...    38   0.079  2
(FD699444) HA_MX2_60f10_SP6 Lobster Multiple Tissues, Normal...    34   0.079  2
(EB622738) AGENCOURT_54965471 D. mojavensis EST Drosophila m...    38   0.079  2
(EB616238) AGENCOURT_54970564 D. mojavensis EST Drosophila m...    38   0.079  2
(EB611673) AGENCOURT_54979117 D. mojavensis EST Drosophila m...    38   0.079  2
(CU633543) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.10   1
(CU137722) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.10   1
(AL844509) Plasmodium falciparum chromosome 13.                    50   0.10   1
(EJ962271) 1093022010362 Global-Ocean-Sampling_GS-30-02-01-1...    50   0.10   1
(EH502968) FDR107-P00054-DEPE-F_A07 FDR107 Danio rerio cDNA ...    50   0.10   1
(CV220094) EST879804 non-normalized T1 cDNA library Trichomo...    50   0.10   1
(CV220093) EST879803 non-normalized T1 cDNA library Trichomo...    50   0.10   1
(CR930413) Danio rerio EST sequence, clone 250-E12-2.              50   0.10   1
(GH171240) Nas120_H11_2005-03-10_081.ab1 Nasturtium 22 days ...    50   0.10   1
(GH164153) Nas31_E12_2004-11-30_088.ab1 Nasturtium 22 days p...    50   0.10   1
(FC797217) CBGC2466.fwd CBGC Lottia gigantea 15h 18h embryos...    50   0.10   1
(FC797094) CBGC24589.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC797093) CBGC24589.rev CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC795831) CBGC23813.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC794396) CBGC22887.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC794395) CBGC22887.rev CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC793450) CBGC22272.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC792573) CBGC21709.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC790205) CBGC20197.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC788848) CBGC1934.fwd CBGC Lottia gigantea 15h 18h embryos...    50   0.10   1
(FC785673) CBGC15928.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC784855) CBGC15426.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC784200) CBGC14822.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC783515) CBGC14396.fwd CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC783514) CBGC14396.rev CBGC Lottia gigantea 15h 18h embryo...    50   0.10   1
(FC762261) CBBN13192.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar...    50   0.10   1
(FC762260) CBBN13192.rev CBBN Lottia gigantea 3,4,5,6.5d Lar...    50   0.10   1
(FC754435) CBBI7995.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    50   0.10   1
(FC749934) CBBI4821.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    50   0.10   1
(FC749933) CBBI4821.rev CBBI Lottia gigantea 26h,37h,61h Lar...    50   0.10   1
(FC748898) CBBI4203.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    50   0.10   1
(FC742492) CBBI13102.fwd CBBI Lottia gigantea 26h,37h,61h La...    50   0.10   1
(FC735932) CBBG9995.fwd CBBG Lottia gigantea 12,15,18h embry...    50   0.10   1
(FC734222) CBBG8841.fwd CBBG Lottia gigantea 12,15,18h embry...    50   0.10   1
(FC733909) CBBG8240.fwd CBBG Lottia gigantea 12,15,18h embry...    50   0.10   1
(FC720923) CBBG13723.fwd CBBG Lottia gigantea 12,15,18h embr...    50   0.10   1
(FC715238) CAXY998.fwd CAXY Lottia gigantea from male gonad ...    50   0.10   1
(FC714820) CAXY9060.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC714819) CAXY9060.rev CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC710592) CAXY6428.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC709037) CAXY5573.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC709036) CAXY5573.rev CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC707766) CAXY4864.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC706924) CAXY4396.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC704887) CAXY2836.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC704886) CAXY2836.rev CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC702630) CAXY1114.fwd CAXY Lottia gigantea from male gonad...    50   0.10   1
(FC698310) CAXX6984.fwd CAXX Lottia gigantea from male gonad...    50   0.10   1
(FC695040) CAXX4744.fwd CAXX Lottia gigantea from male gonad...    50   0.10   1
(FC687605) CAXX19573.fwd CAXX Lottia gigantea from male gona...    50   0.10   1
(FC678769) CAXX12777.fwd CAXX Lottia gigantea from male gona...    50   0.10   1
(FC672361) CAXW8756.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC669395) CAXW6974.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC669394) CAXW6974.rev CAXW Lottia gigantea from female gon...    50   0.10   1
(FC668699) CAXW6560.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC668405) CAXW6367.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC667185) CAXW5317.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC662322) CAXW2588.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC656890) CAXW1506.fwd CAXW Lottia gigantea from female gon...    50   0.10   1
(FC656415) CAXW14779.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC655170) CAXW14064.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC652121) CAXW12304.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC651776) CAXW12111.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC651775) CAXW12111.rev CAXW Lottia gigantea from female go...    50   0.10   1
(FC651200) CAXW11791.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC651199) CAXW11791.rev CAXW Lottia gigantea from female go...    50   0.10   1
(FC649636) CAXW10825.fwd CAXW Lottia gigantea from female go...    50   0.10   1
(FC645414) CAXU7735.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC643879) CAXU6842.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC643343) CAXU6519.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC641985) CAXU5719.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC641984) CAXU5719.rev CAXU Lottia gigantea from female gon...    50   0.10   1
(FC639990) CAXU454.fwd CAXU Lottia gigantea from female gona...    50   0.10   1
(FC639686) CAXU4360.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC636210) CAXU1393.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC635858) CAXU1156.fwd CAXU Lottia gigantea from female gon...    50   0.10   1
(FC635857) CAXU1156.rev CAXU Lottia gigantea from female gon...    50   0.10   1
(FC634177) CAXT9107.rev CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC627092) CAXT5350.fwd CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC625758) CAXT4647.fwd CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC622397) CAXT2730.fwd CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC622396) CAXT2730.rev CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC620888) CAXT1474.fwd CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC620887) CAXT1474.rev CAXT Lottia gigantea from mantle Lot...    50   0.10   1
(FC616324) CAXS8192.fwd CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC616323) CAXS8192.rev CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC615412) CAXS7681.fwd CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC611887) CAXS5787.fwd CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC611886) CAXS5787.rev CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC609163) CAXS4304.fwd CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC609162) CAXS4304.rev CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC608449) CAXS3931.fwd CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC608448) CAXS3931.rev CAXS Lottia gigantea from head, foot...    50   0.10   1
(FC602620) CAXS14206.fwd CAXS Lottia gigantea from head, foo...    50   0.10   1
(FC571536) CAWG451.fwd CAWG Lottia gigantea from mantle (L) ...    50   0.10   1
(FC571535) CAWG451.rev CAWG Lottia gigantea from mantle (L) ...    50   0.10   1
(FC557652) CAWC725.fwd CAWC Lottia gigantea from head (L) Lo...    50   0.10   1
(FC557651) CAWC725.rev CAWC Lottia gigantea from head (L) Lo...    50   0.10   1
(AC158816) Bos taurus clone CH240-62E19, WORKING DRAFT SEQUE...    42   0.18   5
(EK491580) 1095505089417 Global-Ocean-Sampling_GS-32-01-01-1...    38   0.29   2
(EK491172) 1095505087073 Global-Ocean-Sampling_GS-32-01-01-1...    38   0.29   2
(DX913987) gSpTor-1527.bT7 Spironucleus Zap GSS Library Spir...    36   0.29   2
(DX914572) gSpTor-575.bT7 Spironucleus Zap GSS Library Spiro...    36   0.29   2
(BH482512) BOHRL19TF BOHR Brassica oleracea genomic clone BO...    34   0.29   2
(DY029091) 47RDOAH_UP_037_F05_17AUG2004_037 O. Alba 47RDOAH ...    34   0.30   2
(BH737860) BOHXD31TR BO_2_3_KB Brassica oleracea genomic clo...    34   0.30   2
(DX914041) gSpTor-1582.bT7 Spironucleus Zap GSS Library Spir...    36   0.30   2
(ES947736) 49RDOAT_UP_055_A02_27JAN2006_016 Brassica olerace...    34   0.30   2
(EE517512) 36RDBRG_UP_017_A08_11JUN2004_064 Brassica rapa 36...    34   0.30   2
(DY028821) 47RDOAH_UP_034_F01_17AUG2004_005 O. Alba 47RDOAH ...    34   0.30   2
(EX520841) HOPS-CTAB-41_2007-08-12/HOPS-CTAB-41_P06_009_1 Hu...    38   0.30   2
(AM062179) Brassica oleracea var. alboglabra EST, clone  AAF...    34   0.30   2
(DY018512) 48RDOAM_UP_031_F05_13SEP2004_037 O. Alba 48RDOAM ...    34   0.30   2
(BH694779) BOHUD40TR BO_2_3_KB Brassica oleracea genomic clo...    34   0.30   2
(EH426171) OL7486R Brassica oleracea var. alboglabra leaf cD...    34   0.30   2
(EH426167) OL7486F Brassica oleracea var. alboglabra leaf cD...    34   0.30   2
(EE520938) 36RDBRG_UP_058_F04_24NOV2005_022 Brassica rapa 36...    34   0.30   2
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    48   0.40   1
(AE001377) Plasmodium falciparum 3D7 chromosome 2 section 14...    48   0.40   1
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    48   0.40   1
(DU402891) 1098448270442 CHORI-243 Ovis aries genomic clone ...    48   0.40   1
(DU400920) 1098448230122 CHORI-243 Ovis aries genomic clone ...    48   0.40   1
(EL483220) CHUM5135.b1_N11.ab1 CHU(LMS) puzzle sunflower Hel...    48   0.40   1
(EL479670) CHUM1646.b1_L03.ab1 CHU(LMS) puzzle sunflower Hel...    48   0.40   1
(EL474614) CHUL2558.b1_K16.ab1 CHU(LMS) puzzle sunflower Hel...    48   0.40   1
(EL474613) CHUL2557.b1_I16.ab1 CHU(LMS) puzzle sunflower Hel...    48   0.40   1
(DY304244) KN0AAQ8YC16RM1 CitNFL Citrus clementina cDNA 5', ...    48   0.40   1
(AU267732) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(AU267731) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(AU266131) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(AU266130) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(AU261736) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(AU261658) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.40   1
(DR152179) 47487509 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR151058) 49259277 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR147394) 49053788 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR140703) 45440896 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR137491) 49236175 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR134401) 49259037 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR130306) 49053488 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DR122851) 45431784 Drosophila pseudoobscura embryonic cDNA ...    48   0.40   1
(DN196343) USDA-FP_133054 5th Instar Glassy-winged Sharpshoo...    48   0.40   1
(AM765538) Sycon raphanus EST, 5' end sequence, clone IL0ADA...    48   0.40   1
(CO639394) USDA-FP_108131 Adult Glassy-winged Sharpshooter H...    48   0.40   1
(CF083270) QHL19P06.yg.ab1 QH_L sunflower H.paradoxus (salt ...    48   0.40   1
(BM635281) 17000687557694 A.Gam.ad.cDNA1 Anopheles gambiae c...    48   0.40   1
(BJ444074) Dictyostelium discoideum cDNA clone:ddv55l01, 3' ...    48   0.40   1
(BJ425259) Dictyostelium discoideum cDNA clone:ddv55l01, 5' ...    48   0.40   1
(FL507531) vfase1ng_UP_059_F08_02DEC2005_054 Vicia faba cv. ...    48   0.40   1
(FL505455) vfase1ng_UP_031_B02_07NOV2005_014 Vicia faba cv. ...    48   0.40   1
(AL163912) Arabidopsis thaliana DNA chromosome 5, BAC clone ...    46   0.41   2
(CR933821) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    40   0.63   5
(CU915351) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.95   4
(EA680824) Sequence 59703 from patent US 7365185.                  40   1.0    3
(EY444442) CBAY7059.fwd CBAY Tubifex tubifex Embryos and juv...    36   1.1    2
(EY444441) CBAY7059.rev CBAY Tubifex tubifex Embryos and juv...    36   1.1    2
(EY441209) CBAY467.fwd CBAY Tubifex tubifex Embryos and juve...    36   1.1    2
(EY447245) CBAY9189.fwd CBAY Tubifex tubifex Embryos and juv...    36   1.1    2
(EY447244) CBAY9189.rev CBAY Tubifex tubifex Embryos and juv...    36   1.1    2
(EY441208) CBAY467.rev CBAY Tubifex tubifex Embryos and juve...    36   1.1    2
(DN686822) CGX49-C06.x1d-t SHGC-CGX Gasterosteus aculeatus c...    44   1.3    2
(AL772371) Mouse DNA sequence from clone RP23-234N12 on chro...    46   1.6    1
(AC166969) Mus musculus chromosome 1, clone RP23-226P1, comp...    46   1.6    1
(AC164551) Mus musculus BAC clone RP23-365G9 from chromosome...    46   1.6    1
(AC129320) Mus musculus BAC clone RP24-133J7 from chromosome...    46   1.6    1
(AC102788) Mus musculus chromosome 1, clone RP23-437G8, comp...    46   1.6    1
(CR380953) Candida glabrata strain CBS138 chromosome G compl...    46   1.6    1
(BT005466) Arabidopsis thaliana clone U20999 putative glycin...    46   1.6    1
(BT004110) Arabidopsis thaliana clone RAFL15-46-J17 (R20999)...    46   1.6    1
(AY350714) Olimarabidopsis pumila clone BAC Op37I22, complet...    46   1.6    1
(AF362477) Arabidopsis thaliana Kas-1 glycine-rich protein G...    46   1.6    1
(AF362476) Arabidopsis thaliana Ws-2 glycine-rich protein GR...    46   1.6    1
(GC570046) Sequence 7899 from patent US 7420044.                   46   1.6    1
(CU207339) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.6    1
(CU207320) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.6    1
(AC222223) Bos taurus clone CH240-412H5, WORKING DRAFT SEQUE...    46   1.6    1
(BX841726) Arabidopsis thaliana Full-length cDNA Complete se...    46   1.6    1
(BX833927) Arabidopsis thaliana Full-length cDNA Complete se...    46   1.6    1
(BX832819) Arabidopsis thaliana Full-length cDNA Complete se...    46   1.6    1
(ET034296) MUGQ_CH252P336P05Sp6_CP624_017 CHORI-252 Vervet M...    46   1.6    1
(EK233554) 1095460190812 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.6    1
(EK142158) 1095454136983 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.6    1
(CR227252) Forward strand read from insert in 5'HPRT inserti...    46   1.6    1
(CR015428) Forward strand read from insert in 5'HPRT inserti...    46   1.6    1
(BZ383550) SALK_134093.40.80.x Arabidopsis thaliana TDNA ins...    46   1.6    1
(AG260032) Lotus japonicus DNA, clone:LjT49j17_not.                46   1.6    1
(EL464933) CHTS3880.b1_O09.ab1 CHT(LMS) Jerusalem artichoke ...    46   1.6    1
(EC760431) PSE00004645 rw_mgpallid Polysphondylium pallidum ...    46   1.6    1
(AV534797) Arabidopsis thaliana cDNA clone:FB086b06F, 3' end.      46   1.6    1
(AV534531) Arabidopsis thaliana cDNA clone:FB081g07F, 3' end.      46   1.6    1
(AV532725) Arabidopsis thaliana cDNA clone:FB048h09F, 3' end.      46   1.6    1
(AV532617) Arabidopsis thaliana cDNA clone:FB045e05F, 3' end.      46   1.6    1
(AV532405) Arabidopsis thaliana cDNA clone:FB041f06F, 3' end.      46   1.6    1
(DY931230) CHAZ6158.b1_K03.ab1 CHA(XYZ) common wild sunflowe...    46   1.6    1
(DY926453) CHAY9977.b1_B24.ab1 CHA(XYZ) common wild sunflowe...    46   1.6    1
(DY923552) CHAY6727.b1_M02.ab1 CHA(XYZ) common wild sunflowe...    46   1.6    1
(DT700412) s13dFA61D08LF062_257958 Tall fescue, Festuca arun...    46   1.6    1
(DT685303) s13dFA12A11FS085_519754 Tall fescue, Festuca arun...    46   1.6    1
(DR369720) 46385 CERES-147 Arabidopsis thaliana cDNA clone 1...    46   1.6    1
(DR369718) 35371 CERES-149 Arabidopsis thaliana cDNA clone 5...    46   1.6    1
(DR369717) 112364 CERES-147 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369716) 35882 CERES-149 Arabidopsis thaliana cDNA clone 1...    46   1.6    1
(DR369707) 970682 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369706) 136380 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369704) 1105015 CERES-147 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR369702) 142328 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369700) 138141 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369698) 49532 CERES-147 Arabidopsis thaliana cDNA clone 1...    46   1.6    1
(DR369697) 162044 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369693) 1136441 CERES-147 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR369688) 1081725 CERES-148 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR369685) 129876 CERES-147 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369683) 130204 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369682) 38437 CERES-147 Arabidopsis thaliana cDNA clone 3...    46   1.6    1
(DR369681) 40576 CERES-147 Arabidopsis thaliana cDNA clone 5...    46   1.6    1
(DR369680) 64141 CERES-147 Arabidopsis thaliana cDNA clone 2...    46   1.6    1
(DR369678) 65413 CERES-149 Arabidopsis thaliana cDNA clone 3...    46   1.6    1
(DR369677) 129856 CERES-147 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369676) 135657 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369675) 70120 CERES-147 Arabidopsis thaliana cDNA clone 3...    46   1.6    1
(DR369671) 163494 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369670) 134715 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369669) 139241 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369661) 113646 CERES-147 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369658) 151969 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369656) 169557 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR369652) 1133260 CERES-148 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292122) 160415 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292121) 4524080 CERES-149 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292115) 64901 CERES-147 Arabidopsis thaliana cDNA clone 3...    46   1.6    1
(DR292114) 136102 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292111) 149353 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292108) 1133788 CERES-147 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292102) 4499985 CERES-148 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292100) 4515999 CERES-149 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292099) 4520321 CERES-149 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292096) 5741387 CERES-AL46 Arabidopsis thaliana cDNA clon...    46   1.6    1
(DR292095) 140979 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292094) 159540 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292093) 961584 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292092) 42028 CERES-147 Arabidopsis thaliana cDNA clone 7...    46   1.6    1
(DR292091) 11062699 CERES-AN65 Arabidopsis thaliana cDNA clo...    46   1.6    1
(DR292090) 971794 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292079) 4523468 CERES-149 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292076) 153736 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292075) 11065538 CERES-AN65 Arabidopsis thaliana cDNA clo...    46   1.6    1
(DR292073) 11055339 CERES-AN65 Arabidopsis thaliana cDNA clo...    46   1.6    1
(DR292072) 12848310 CERES-AN65 Arabidopsis thaliana cDNA clo...    46   1.6    1
(DR292064) 130941 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292063) 114179 CERES-149 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292059) 52356 CERES-149 Arabidopsis thaliana cDNA clone 1...    46   1.6    1
(DR292058) 46353 CERES-147 Arabidopsis thaliana cDNA clone 1...    46   1.6    1
(DR292057) 155064 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DR292054) 1150673 CERES-147 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292048) 4522940 CERES-149 Arabidopsis thaliana cDNA clone...    46   1.6    1
(DR292047) 958239 CERES-148 Arabidopsis thaliana cDNA clone ...    46   1.6    1
(DK435850) Drosophila simulans mRNA, adult full-length cDNA ...    46   1.6    1
(DK434590) Drosophila simulans mRNA, adult full-length cDNA ...    46   1.6    1
(DK429514) Drosophila simulans mRNA, adult full-length cDNA ...    46   1.6    1
(CO391902) WS#3_B09_03RxOF5-31-02 FemaleRT Drosophila simula...    46   1.6    1
(CI999990) Capra hircus cDNA, clone:R116, unspecified EST.         46   1.6    1
(AJ828073) Helianthus annuus EST, clone HaHeaR005B20.              46   1.6    1
(AJ542264) Helianthus annuus EST, clone HN0007A1.                  46   1.6    1
(CF094149) QHN16P21.yg.ab1 QH_N sunflower H.argophyllus (dro...    46   1.6    1
(CD855617) DH0AF22ZB05ZM1 HaDevR7 Helianthus annuus cDNA clo...    46   1.6    1
(CD851000) DH0AL3ZH10ZM1 HaDevR5 Helianthus annuus cDNA clon...    46   1.6    1
(CD850936) DH0AL3ZB05ZM1 HaDevR5 Helianthus annuus cDNA clon...    46   1.6    1
(CD849546) DH0AC021ZE06FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(CD849472) DH0AC020ZF03FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(CD848567) DH0AC008ZC07FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(CD848469) DH0AC006ZG10FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(CD848278) DH0AC004ZA09FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(CD848218) DH0AC003ZB10FM1 HaDevR2 Helianthus annuus cDNA cl...    46   1.6    1
(BI513815) BB160013B20H01.5 Bee Brain Normalized Library, BB...    46   1.6    1
(AA728423) 33602 CD4-6 Arabidopsis thaliana cDNA clone K2E5R...    46   1.6    1
(GE503756) CCFT3978.g1_D11.ab1 CCF(STU) sunflower Helianthus...    46   1.6    1
(GE499179) CCFT1598.g1_K15.ab1 CCF(STU) sunflower Helianthus...    46   1.6    1
(GE498146) CCFT1059.g1_F02.ab1 CCF(STU) sunflower Helianthus...    46   1.6    1
(FE671867) mh1_0011_A09 Drought-stressed chickpea leave libr...    46   1.6    1
(FE671281) mh1_0003_H10 Drought-stressed chickpea leave libr...    46   1.6    1
(FE669818) mh2_0020_G08 Chickpea leave library Cicer arietin...    46   1.6    1
(FE669572) mh2_0018_A12 Chickpea leave library Cicer arietin...    46   1.6    1
(FE669126) mh2_0013_B03 Chickpea leave library Cicer arietin...    46   1.6    1
(FE303391) CANP4035.fwd CANP_Daphnia_pulex_Log50_Library_2 D...    46   1.6    1
(FE303390) CANP4035.rev CANP_Daphnia_pulex_Log50_Library_2 D...    46   1.6    1
(FC668149) CAXW6190.fwd CAXW Lottia gigantea from female gon...    46   1.6    1
(EV954620) rcli31b_d24.y1 cli Sus scrofa cDNA 5', mRNA seque...    46   1.6    1
(EV923285) rcga35b_i14.y1 cga Sus scrofa cDNA 5', mRNA seque...    46   1.6    1
(EV445419) agen0049_031_a03_q1ca Goat early pregnancy (d4-8)...    46   1.6    1
(EV445418) agen0049_031_a03_p1ca Goat early pregnancy (d4-8)...    46   1.6    1
(EV444910) agen0049_015d_e12_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV443339) agen0049_013b_g01_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV443127) agen0049_013a_d03_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV443126) agen0049_013a_d03_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV442468) agen0049_011d_a10_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV442467) agen0049_011d_a10_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV441985) agen0049_010d_h01_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV440803) agen0049_009a_c03_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV440774) agen0049_009a_a09_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV440773) agen0049_009a_a09_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV440030) agen0049_007d_c05_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV440029) agen0049_007d_c05_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV439193) agen0049_006c_b01_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV438768) agen0049_005d_c12_q1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV438767) agen0049_005d_c12_p1ca Goat early pregnancy (d4-8...    46   1.6    1
(EV157247) 0081109 Brassica napus Bud library Brassica napus...    46   1.6    1
(CR378666) Photobacterium profundum SS9; segment 4/12.             46   1.6    1
(BA000023) Sulfolobus tokodaii str. 7 DNA, complete genome.        46   1.6    1
(AC205622) Zea mays chromosome 1 clone CH201-238P14; ZMMBBc0...    40   1.7    3
(AG310648) Mus musculus molossinus DNA, clone:MSMg01-093B24....    40   2.1    2
(FG451072) 010602KAFB005012HT (KAFB) Actinidia deliciosa bud...    42   2.3    2
(CT033839) Zebrafish DNA sequence from clone CH73-91I15 in l...    42   2.6    2
(DE271118) Oryzias latipes DNA, clone: ola1-201O24.R, genomi...    42   2.6    2
(EJ090309) 1095460168875 Global-Ocean-Sampling_GS-26-01-01-1...    38   2.8    2
(CR955012) Medicago truncatula chromosome 5 clone mth2-84f14...    38   2.9    3
(AC025828) Homo sapiens, clone RP11-13I24, complete sequence.      34   3.1    2
(AC091639) Homo sapiens chromosome 8, clone RP11-61K18, comp...    34   3.1    2
(CR788265) Human DNA sequence *** SEQUENCING CANCELLED *** f...    34   3.2    2
(AF362475) Arabidopsis thaliana Cvi-0 glycine-rich protein g...    40   3.3    2
(ER553835) 1093016279976 Global-Ocean-Sampling_GS-35-01-01-1...    38   3.3    2
(EJ668260) 1092955049207 Global-Ocean-Sampling_GS-30-02-01-1...    40   3.4    2
(EJ001504) 1091120850457 Global-Ocean-Sampling_GS-26-01-01-1...    38   3.5    2
(EJ057807) 1095456040005 Global-Ocean-Sampling_GS-26-01-01-1...    38   3.5    2
(EJ705443) 1092956051669 Global-Ocean-Sampling_GS-30-02-01-1...    40   3.6    2
(AJ304035) Plasmodium chabaudi genome survey sequence, clone...    34   3.8    2
(BG817594) ESSU0016 S.scabiei cDNA library Sarcoptes scabiei...    32   4.1    2
(AC111722) Rattus norvegicus clone CH230-63K18, *** SEQUENCI...    36   4.1    6
(DY011740) BNSCSICT_UP_031_D03_21DEC2004_025 Brassica napus ...    32   4.1    2
(DQ244755) Zea mays clone 10510 mRNA sequence.                     32   4.1    2
(DW997538) BNDH2DCT_UP_006_F06_12JUN2004_038 Brassica napus ...    32   4.1    2
(EE405882) 17ACDHMS_UP_026_B09_28OCT2004_077 Brassica napus ...    32   4.1    2
(EE454571) BNBS4DCT_UP_016_A05_24MAR2005_047 Brassica napus ...    32   4.1    2
(EE507776) 24RDBNH_UP_048_F04_28FEB2004_022 Brassica napus 2...    32   4.1    2
(BM522030) ESSU0567 S.scabiei cDNA library Sarcoptes scabiei...    32   4.1    2
(ES953817) 9RDBNGA_UP_115_A03_15SEP2005_031 Brassica napus 9...    32   4.1    2
(DY002175) 54ACDHPE_UP_012_F12_08NOV2004_086 Brassica napus ...    32   4.1    2
(EE417754) 58ACPE48_UP_009_D07_17SEP2004_057 Brassica napus ...    32   4.1    2
(EV057150) BNSCS3CT_UP_255_G12_17MAY2007_084 Brassica napus ...    32   4.1    2
(EV048161) BNSCS3CT_UP_145_A06_10MAY2007_048 Brassica napus ...    32   4.1    2
(BM521897) ESSU0434 S.scabiei cDNA library Sarcoptes scabiei...    32   4.1    2
(EE479546) BNYS6DCT_UP_019_D07_05MAY2005_057 Brassica napus ...    32   4.1    2
(BG465680) RHIZ2_47_D06.b1_A003 Rhizome2 (RHIZ2) Sorghum pro...    32   4.2    2
(BG241847) RHIZ2_51_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum pro...    32   4.2    2
(BG052814) RHIZ2_14_C12.b1_A003 Rhizome2 (RHIZ2) Sorghum pro...    32   4.2    2
(BG817740) ESSU0162 S.scabiei cDNA library Sarcoptes scabiei...    32   4.2    2
(EE438344) 64ETCOT5_T3_014_E03_30JAN2005_023 Brassica napus ...    32   4.2    2
(EE415067) 57ACPE6_UP_008_A10_10SEP2004_080 Brassica napus D...    32   4.2    2
(BM522095) ESSU0632 S.scabiei cDNA library Sarcoptes scabiei...    32   4.2    2
(DY020707) 53COT5_T3_009_C06_19JUL2004_044 Brassica napus 36...    32   4.2    2
(EE543982) 9RDBNGA_UP_046_C12_05DEC2003_092 Brassica napus -...    32   4.2    2
(AC119742) Homo sapiens chromosome 3 clone RP11-769B17, *** ...    32   4.2    8
(BM522203) ESSU0741 S.scabiei cDNA library Sarcoptes scabiei...    32   4.2    2
(BG558782) RHIZ2_56_E05.b1_A003 Rhizome2 (RHIZ2) Sorghum pro...    32   4.2    2
(CX281585) JKBNHS1_UP_007_F07_02JUL2004_053 Brassica napus J...    32   4.2    2
(AC092796) Homo sapiens chromosome 3 clone RP11-11F9, comple...    44   4.4    3
(AC178527) Strongylocentrotus purpuratus clone R3-113H21, WO...    38   4.8    6
(AM433353) Vitis vinifera contig VV78X066558.22, whole genom...    40   4.9    4
(AC090897) Homo sapiens chromosome 18, clone RP11-61D1, comp...    36   4.9    4
(DQ084046) Oxyuranus scutellatus mitochondrial protein L12-l...    44   6.2    1
(CR753899) Zebrafish DNA sequence from clone DKEY-267F18 in ...    44   6.2    1
(BX908393) Zebrafish DNA sequence from clone CH211-180H19 in...    44   6.2    1
(AB072811) Scomber japonicus mlc1 mRNA for myosin light chai...    44   6.2    1
(AC215774) Pongo abelii BAC clone CH276-59F17 from chromosom...    44   6.2    1
(AC195408) Pan troglodytes BAC clone CH251-519K17 from chrom...    44   6.2    1
(EF533129) Oryza rufipogon ecotype W1294 RLD12 locus, partia...    44   6.2    1
(EF533128) Oryza rufipogon ecotype W1236 RLD12 locus, partia...    44   6.2    1
(EF533127) Oryza rufipogon ecotype SN RLD12 locus, partial s...    44   6.2    1
(EF533126) Oryza rufipogon ecotype CB22 RLD12 locus, partial...    44   6.2    1
(EF533125) Oryza rufipogon ecotype YG2A RLD12 locus, partial...    44   6.2    1
(EF533124) Oryza rufipogon ecotype CT55 RLD12 locus, partial...    44   6.2    1
(EF533123) Oryza sativa (japonica cultivar-group) cultivar K...    44   6.2    1
(EF533122) Oryza sativa (japonica cultivar-group) cultivar Y...    44   6.2    1
(EF533121) Oryza sativa (japonica cultivar-group) cultivar S...    44   6.2    1
(EF533120) Oryza sativa (japonica cultivar-group) cultivar H...    44   6.2    1
(EF533119) Oryza sativa (japonica cultivar-group) cultivar K...    44   6.2    1
(EF533118) Oryza barthii ecotype W720 RLD12 locus, partial s...    44   6.2    1
(EF533117) Oryza sativa cultivar W1300 RLD12 locus, partial ...    44   6.2    1
(EF533116) Oryza glumipatula ecotype W1169 RLD12 locus, part...    44   6.2    1
(EF533115) Oryza rufipogon ecotype W1965 RLD12 locus, partia...    44   6.2    1
(EF533114) Oryza rufipogon ecotype W1964 RLD12 locus, partia...    44   6.2    1
(EF533113) Oryza rufipogon ecotype W1956 RLD12 locus, partia...    44   6.2    1
(EF533112) Oryza rufipogon ecotype W108 RLD12 locus, partial...    44   6.2    1
(EF533111) Oryza glaberrima ecotype W440 RLD12 locus, partia...    44   6.2    1
(EF533110) Oryza glaberrima ecotype W401 RLD12 locus, partia...    44   6.2    1
(EF533109) Oryza sativa (indica cultivar-group) cultivar C80...    44   6.2    1
(EF533108) Oryza sativa (indica cultivar-group) cultivar 103...    44   6.2    1
(EF533107) Oryza sativa (indica cultivar-group) cultivar 435...    44   6.2    1
(EF533106) Oryza sativa (indica cultivar-group) cultivar 415...    44   6.2    1
(EF533105) Oryza sativa (indica cultivar-group) cultivar 101...    44   6.2    1
(EF533104) Oryza sativa (indica cultivar-group) cultivar IR3...    44   6.2    1
(EF533103) Oryza sativa (japonica cultivar-group) cultivar N...    44   6.2    1
(EF533102) Oryza sativa (indica cultivar-group) cultivar Kas...    44   6.2    1
(EF533101) Oryza sativa (japonica cultivar-group) cultivar D...    44   6.2    1
(EF533100) Oryza sativa (japonica cultivar-group) cultivar A...    44   6.2    1
(EF533099) Oryza sativa (japonica cultivar-group) cultivar I...    44   6.2    1
(EF533098) Oryza sativa (japonica cultivar-group) cultivar U...    44   6.2    1
(EF380354) Illicium oligandrum chloroplast, complete genome.       44   6.2    1
(AY145325) Illicium floridanum trnT-trnL intergenic spacer, ...    44   6.2    1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN...    44   6.2    1
(AP004997) Oryza sativa Japonica Group genomic DNA, chromoso...    44   6.2    1
(AM483958) Vitis vinifera, whole genome shotgun sequence, co...    44   6.2    1
(AK100898) Oryza sativa Japonica Group cDNA clone:J023131C20...    44   6.2    1
(AK072646) Oryza sativa Japonica Group cDNA clone:J023129P11...    44   6.2    1
(AC210349) Solanum lycopersicum chromosome 7 clone C07HBa002...    44   6.2    1
(AC189299) Brassica rapa subsp. pekinensis clone KBrB028K05,...    44   6.2    1
(AB260333) Oryza rufipogon DNA, locus RLD12, clone:12SNP99W1...    44   6.2    1
(AB260332) Oryza rufipogon DNA, locus RLD12, clone:12SNP98W1...    44   6.2    1
(AB260331) Oryza rufipogon DNA, locus RLD12, clone:12SNP96W1...    44   6.2    1
(AB260330) Oryza rufipogon DNA, locus RLD12, clone:12SNP91W108.    44   6.2    1
(AB260329) Oryza glaberrima DNA, locus RLD12, clone:12SNP87W...    44   6.2    1
(AB260328) Oryza glaberrima DNA, locus RLD12, clone:12SNP85W...    44   6.2    1
(AB260327) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260326) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260325) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260324) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260323) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260322) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260321) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260320) Oryza sativa Indica Group DNA, locus RLD12, clone...    44   6.2    1
(AB260319) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260318) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260317) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260316) Oryza rufipogon DNA, locus RLD12, clone:12SNP375W...    44   6.2    1
(AB260315) Oryza rufipogon DNA, locus RLD12, clone:12SNP374W...    44   6.2    1
(AB260314) Oryza rufipogon DNA, locus RLD12, clone:12SNP369_SN.    44   6.2    1
(AB260313) Oryza rufipogon DNA, locus RLD12, clone:12SNP362_...    44   6.2    1
(AB260312) Oryza rufipogon DNA, locus RLD12, clone:12SNP358_...    44   6.2    1
(AB260311) Oryza rufipogon DNA, locus RLD12, clone:12SNP356_...    44   6.2    1
(AB260310) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260309) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260308) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260307) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260306) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260305) Oryza sativa Japonica Group DNA, locus RLD12, clo...    44   6.2    1
(AB260304) Oryza barthii DNA, locus RLD12, clone:12SNP114W720.     44   6.2    1
(AB260303) Oryza meridionalis DNA, locus RLD12, clone:12SNP1...    44   6.2    1
(AB260302) Oryza glumipatula DNA, locus RLD12, clone:12SNP10...    44   6.2    1
(FB910599) Sequence 129872 from Patent WO2008034648.               44   6.2    1
(FB910589) Sequence 129862 from Patent WO2008034648.               44   6.2    1
(FB902200) Sequence 121473 from Patent WO2008034648.               44   6.2    1
(FB900268) Sequence 119541 from Patent WO2008034648.               44   6.2    1
(AX346286) Sequence 1357 from Patent WO0200928.                    44   6.2    1
(GC701686) Sequence 16931 from patent US 6812339.                  44   6.2    1
(GC701685) Sequence 16930 from patent US 6812339.                  44   6.2    1
(GC701684) Sequence 16929 from patent US 6812339.                  44   6.2    1
(GC701683) Sequence 16928 from patent US 6812339.                  44   6.2    1
(GC699363) Sequence 14608 from patent US 6812339.                  44   6.2    1
(GC699102) Sequence 14347 from patent US 6812339.                  44   6.2    1
(GC699101) Sequence 14346 from patent US 6812339.                  44   6.2    1
(GC699100) Sequence 14345 from patent US 6812339.                  44   6.2    1
(GC699099) Sequence 14344 from patent US 6812339.                  44   6.2    1
(GC699098) Sequence 14343 from patent US 6812339.                  44   6.2    1
(GC699097) Sequence 14342 from patent US 6812339.                  44   6.2    1
(GC699096) Sequence 14341 from patent US 6812339.                  44   6.2    1
(GC699095) Sequence 14340 from patent US 6812339.                  44   6.2    1
(AY833022) Plasmodium vivax strain Thailand MS127 merozoite ...    44   6.2    1
(AY568073) Entamoeba moshkovskii strain FIC alanyl-tRNA synt...    44   6.2    1
(AC099561) Homo sapiens chromosome 1 clone RP11-193H16, comp...    44   6.2    1
(AC092795) Homo sapiens chromosome 3 clone RP11-9J18, comple...    44   6.2    1
(AC002366) Human Xp22 BAC CT-285I15 (from CalTech/Research G...    44   6.2    1
(AC027598) Homo sapiens chromosome 17 clone RP11-81G16 map 1...    44   6.2    1
(AL844507) Plasmodium falciparum chromosome 8.                     44   6.2    1
(AL139146) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   6.2    1
(AC233023) Monodelphis domestica clone VMRC18-868M10, WORKIN...    44   6.2    1
(AC232633) Solanum lycopersicum chromosome 7 clone C07SLe009...    44   6.2    1
(AC231739) Zea mays chromosome 1 clone CH201-517A3; ZMMBBc05...    44   6.2    1
(AC229645) Monodelphis domestica clone VMRC18-920F5, WORKING...    44   6.2    1
(AC226473) Monodelphis domestica clone VMRC18-104A21, WORKIN...    44   6.2    1
(AC225539) Medicago truncatula clone mth2-69c17, WORKING DRA...    44   6.2    1
(AC205157) Zea mays chromosome 10 clone CH201-157H10; ZMMBBc...    44   6.2    1
(AC204931) Zea mays chromosome 1 clone ZMMBBb-581I14; ZMMBBb...    44   6.2    1
(AC199185) Zea mays chromosome 10 clone CH201-390M19; ZMMBBc...    44   6.2    1
(AC187827) Zea mays chromosome 4 clone CH201-316N15; ZMMBBc0...    44   6.2    1
(AC185469) Zea mays chromosome 4 clone CH201-272M16; ZMMBBc0...    44   6.2    1
(AC182407) Bos taurus clone CH240-515K22, WORKING DRAFT SEQU...    44   6.2    1
(AC166043) Bos taurus clone CH240-165J11, WORKING DRAFT SEQU...    44   6.2    1
(AC022771) Homo sapiens clone RP11-368G6, WORKING DRAFT SEQU...    44   6.2    1
(ET821245) CHO_OF760xo02r1.ab1 CHO_OF Nicotiana tabacum geno...    44   6.2    1
(ER819512) POTM039TR Solanum tuberosum RHPOTKEY BAC ends Sol...    44   6.2    1

>(AC116956) Dictyostelium discoideum chromosome 2 map 1418423-1684967
              strain AX4, complete sequence.
          Length = 266544

 Score =  638 bits (322), Expect(3) = 0.0
 Identities = 322/322 (100%)
 Strand = Plus / Plus


Query: 271    ttaagtattccagatattgatctttccagtctcggttcaggtgccccagcaggtggagct 330
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262820 ttaagtattccagatattgatctttccagtctcggttcaggtgccccagcaggtggagct 262879


Query: 331    gccccagctgccgctgctgcaccagccgctgttgccaaaacagatttccaagttagactc 390
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262880 gccccagctgccgctgctgcaccagccgctgttgccaaaacagatttccaagttagactc 262939


Query: 391    gttaaagtaccagatggtgccaaatataagattattaaagaattaagagaagtcaaacca 450
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262940 gttaaagtaccagatggtgccaaatataagattattaaagaattaagagaagtcaaacca 262999


Query: 451    tcactcagtttaatggaaactaaaggtctcgttgaaaagattccttcagttattgccgat 510
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263000 tcactcagtttaatggaaactaaaggtctcgttgaaaagattccttcagttattgccgat 263059


Query: 511    aaagtttcaaaagaagaagcagaaaagattattgctaaattaaaggcttctggtgctgaa 570
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263060 aaagtttcaaaagaagaagcagaaaagattattgctaaattaaaggcttctggtgctgaa 263119


Query: 571    cttgaaatggcttaaattatat 592
              ||||||||||||||||||||||
Sbjct: 263120 cttgaaatggcttaaattatat 263141

 Score =  355 bits (179), Expect(3) = 0.0
 Identities = 179/179 (100%)
 Strand = Plus / Plus


Query: 84     gttaaagtgcaacaacaatacattatatagcactcgtttattcacaacagaaccagaaaa 143
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262125 gttaaagtgcaacaacaatacattatatagcactcgtttattcacaacagaaccagaaaa 262184


Query: 144    agttaaccttaaacttaccacaattgaaaatggtaaatcctcaacagaagttgctgattt 203
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262185 agttaaccttaaacttaccacaattgaaaatggtaaatcctcaacagaagttgctgattt 262244


Query: 204    agtcgaaagaatctcaaaactttccattttggacgttatggatttaacccaacatttac 262
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262245 agtcgaaagaatctcaaaactttccattttggacgttatggatttaacccaacatttac 262303

 Score =  168 bits (85), Expect(3) = 0.0
 Identities = 85/85 (100%)
 Strand = Plus / Plus


Query: 1      gtgctgttttatacatataattatataaaaattaaaatgatctcaagagtatcactcaat 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261651 gtgctgttttatacatataattatataaaaattaaaatgatctcaagagtatcactcaat 261710


Query: 61     aaatgtttttcaactttatcaaagt 85
              |||||||||||||||||||||||||
Sbjct: 261711 aaatgtttttcaactttatcaaagt 261735

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 775,797,737
Number of extensions: 50433290
Number of successful extensions: 4690549
Number of sequences better than 10.0: 682
Length of query: 610
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 587
Effective length of database: 99,442,330,388
Effective search space: 58372647937756
Effective search space used: 58372647937756
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U04257-1 (Contig-U04257-1Q) /CSM_Contig/Contig-U04257-1Q.Seq.d
         (610 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116956_94(AC116956|pid:none) Dictyostelium discoideum chromoso...   277   1e-73
T26299(T26299) hypothetical protein W09D10.3 - Caenorhabditis el...    63   8e-09
AB264724_1(AB264724|pid:none) Papilio xuthus mRNA for similar to...    60   5e-08
BC093312_1(BC093312|pid:none) Danio rerio mitochondrial ribosoma...    58   2e-07
BT074838_1(BT074838|pid:none) Osmerus mordax clone omor-eva-508-...    57   4e-07
AF370294_1(AF370294|pid:none) Arabidopsis thaliana putative ribo...    57   5e-07
BT064957_1(BT064957|pid:none) Zea mays full-length cDNA clone ZM...    56   9e-07
CR380954_144(CR380954|pid:none) Candida glabrata strain CBS138 c...    55   1e-06
AM270081_38(AM270081|pid:none) Aspergillus niger contig An04c020...    55   1e-06
CR382124_129(CR382124|pid:none) Kluyveromyces lactis strain NRRL...    55   2e-06
DQ214259_1(DQ214259|pid:none) Taeniopygia guttata clone 0058P000...    54   4e-06
CR855493_1(CR855493|pid:none) Xenopus tropicalis finished cDNA, ...    54   4e-06
AP007155_1085(AP007155|pid:none) Aspergillus oryzae RIB40 genomi...    53   8e-06
X79865_1(X79865|pid:none) H.sapiens Mrp17 mRNA.                        52   1e-05
(P52815) RecName: Full=39S ribosomal protein L12, mitochondrial;...    52   1e-05
(Q9USJ9) RecName: Full=60 ribosomal protein L12, mitochondrial; ...    52   1e-05
AK340347_1(AK340347|pid:none) Acyrthosiphon pisum ACYPI008498 mR...    52   1e-05
(Q9DB15) RecName: Full=39S ribosomal protein L12, mitochondrial;...    52   2e-05
BC142005_1(BC142005|pid:none) Bos taurus mitochondrial ribosomal...    51   2e-05
(Q7YR75) RecName: Full=39S ribosomal protein L12, mitochondrial;...    51   2e-05
BT071991_1(BT071991|pid:none) Salmo salar clone ssal-rgf-506-327...    51   3e-05
AC002062_9(AC002062|pid:none) Sequence of BAC F20P5 from Arabido...    51   3e-05
CU928180_179(CU928180|pid:none) Kluyveromyces thermotolerans str...    50   4e-05
CU928179_362(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    50   4e-05
(P52827) RecName: Full=39S ribosomal protein L12, mitochondrial;...    50   5e-05
CR382132_729(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    50   7e-05
(Q89B19) RecName: Full=50S ribosomal protein L7/L12;  &AE016826_...    49   9e-05
(Q9AAU7) RecName: Full=50S ribosomal protein L7/L12;  &AE005673_...    49   1e-04
EU976986_1(EU976986|pid:none) Zea mays clone 995576 50S ribosoma...    48   2e-04
AE014296_1645(AE014296|pid:none) Drosophila melanogaster chromos...    48   2e-04
DQ138692_1(DQ138692|pid:none) Drosophila melanogaster strain Ral...    47   3e-04
EU313674_1(EU313674|pid:none) Drosophila simulans strain 03FG mi...    47   3e-04
(B0SUP3) RecName: Full=50S ribosomal protein L7/L12;  &CP000927_...    47   3e-04
DQ138696_1(DQ138696|pid:none) Drosophila yakuba strain T33 CG501...    47   3e-04
DQ138695_1(DQ138695|pid:none) Drosophila yakuba strain Tai18 CG5...    47   3e-04
EF122254_7(EF122254|pid:none) Candidatus Liberibacter americanus...    46   7e-04
(P36688) RecName: Full=50S ribosomal protein L12, chloroplastic;...    45   0.001
(P24929) RecName: Full=50S ribosomal protein L12, chloroplastic;...    45   0.001
AC068073_2(AC068073|pid:none) Arabidopsis thaliana chromosome 3 ...    45   0.002
(Q0BYA6) RecName: Full=50S ribosomal protein L7/L12;  &CP000158_...    45   0.002
CP001327_43(CP001327|pid:none) Micromonas sp. RCC299 chromosome ...    44   0.003
AE017321_644(AE017321|pid:none) Wolbachia endosymbiont strain TR...    44   0.003
CP000568_2680(CP000568|pid:none) Clostridium thermocellum ATCC 2...    44   0.004
(Q6B905) RecName: Full=50S ribosomal protein L12, chloroplastic;...    44   0.004
(A9B5G8) RecName: Full=50S ribosomal protein L7/L12;  &CP000875_...    44   0.004
(O22386) RecName: Full=50S ribosomal protein L12, chloroplastic;...    44   0.004
BT036688_1(BT036688|pid:none) Zea mays full-length cDNA clone ZM...    43   0.006
(Q7VRP6) RecName: Full=50S ribosomal protein L7/L12;  &BX248583_...    43   0.006
(B2UQY3) RecName: Full=50S ribosomal protein L7/L12;  &CP001071_...    43   0.006
X68325_1(X68325|pid:none) S.cereale L12-1 mRNA for ribosomal pro...    43   0.006
AL844504_243(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    43   0.008
(Q85G10) RecName: Full=50S ribosomal protein L12, chloroplastic;...    43   0.008
EU966733_1(EU966733|pid:none) Zea mays clone 296827 50S ribosoma...    42   0.011
AM494968_321(AM494968|pid:none) Leishmania braziliensis chromoso...    42   0.011
(Q5L5I2) RecName: Full=50S ribosomal protein L7/L12;  &CR848038_...    42   0.011
(B4S496) RecName: Full=50S ribosomal protein L7/L12;  &CP001108_...    42   0.014
(A7I3U0) RecName: Full=50S ribosomal protein L7/L12;  &CP000776_...    42   0.014
DQ444221_1(DQ444221|pid:none) Nicotiana plumbaginifolia Joka20 m...    42   0.018
AC096689_14(AC096689|pid:none) Oryza sativa chromosome 3 BAC OSJ...    42   0.018
DQ229107_75(DQ229107|pid:none) Chara vulgaris chloroplast, compl...    42   0.018
AB022673_1(AB022673|pid:none) Oryza sativa Japonica Group rpl12-...    41   0.024
CP000975_798(CP000975|pid:none) Methylacidiphilum infernorum V4,...    41   0.024
EU952302_1(EU952302|pid:none) Zea mays clone 1276810 50S ribosom...    41   0.024
(P02398) RecName: Full=50S ribosomal protein L12, chloroplastic;...    41   0.031
AK070231_1(AK070231|pid:none) Oryza sativa Japonica Group cDNA c...    41   0.031
(P53163) RecName: Full=54S ribosomal protein L12, mitochondrial;...    41   0.031
AC079815_33(AC079815|pid:none) Trypanosoma brucei chromosome 4 c...    41   0.031
(Q9Z9A1) RecName: Full=50S ribosomal protein L7/L12;  &AE001363_...    40   0.040
BT034500_1(BT034500|pid:none) Zea mays full-length cDNA clone ZM...    40   0.053
EU965303_1(EU965303|pid:none) Zea mays clone 285128 60S ribosoma...    40   0.053
(B3EL60) RecName: Full=50S ribosomal protein L7/L12;  &CP001101_...    40   0.069
(Q03ST6) RecName: Full=50S ribosomal protein L7/L12;  &CP000416_...    40   0.069
(A7MQP6) RecName: Full=50S ribosomal protein L7/L12;  &CP000783_...    40   0.069
(P58138) RecName: Full=50S ribosomal protein L12, plastid;  &AJ2...    39   0.090
AM502249_356(AM502249|pid:none) Leishmania infantum chromosome 31.     39   0.12
(B0B7N2) RecName: Full=50S ribosomal protein L7/L12;  &(B0BBU7) ...    39   0.12
AF010581_1(AF010581|pid:none) Oryza sativa ribosomal protein L12...    39   0.15
(A7ZUK0) RecName: Full=50S ribosomal protein L7/L12;  &(A8A785) ...    39   0.15
BT037242_1(BT037242|pid:none) Zea mays full-length cDNA clone ZM...    39   0.15
(P41188) RecName: Full=50S ribosomal protein L7/L12;  &AE013218_...    39   0.15
AE017245_413(AE017245|pid:none) Mycoplasma synoviae 53, complete...    39   0.15
FJ498805_2(FJ498805|pid:none) Candidatus Liberibacter sp. Burns ...    39   0.15
(A9MHF3) RecName: Full=50S ribosomal protein L7/L12;  &CP000880_...    38   0.20
CP001655_3792(CP001655|pid:none) Dickeya zeae Ech1591, complete ...    38   0.20
(Q67JT2) RecName: Full=50S ribosomal protein L7/L12;  &AP006840_...    38   0.26
(B8FEU2) RecName: Full=50S ribosomal protein L7/L12;  &CP001322_...    38   0.26
(B0TC46) RecName: Full=50S ribosomal protein L7/L12;  &CP000930_...    37   0.34
EF145706_1(EF145706|pid:none) Populus trichocarpa clone WS0112_M...    37   0.44
EU834131_2(EU834131|pid:none) Candidatus Liberibacter solanacear...    37   0.44
(Q31QK6) RecName: Full=50S ribosomal protein L7/L12;  &(Q5N3N6) ...    37   0.44
FJ498803_2(FJ498803|pid:none) Candidatus Liberibacter sp. CA DP-...    37   0.44
AY342001_7(AY342001|pid:none) Candidatus Liberibacter asiaticus ...    37   0.58
(B2S2I7) RecName: Full=50S ribosomal protein L7/L12;  &(O83268) ...    37   0.58
(A4W5A6) RecName: Full=50S ribosomal protein L7/L12;  &CP000653_...    37   0.58
AF289262_24(AF289262|pid:none) Porcine adenovirus 5, complete ge...    36   0.75
(P23349) RecName: Full=50S ribosomal protein L7/L12;  &BA000022_...    36   0.76
EU919514_2(EU919514|pid:none) Candidatus Liberibacter solanacear...    36   0.76
(Q3MA16) RecName: Full=50S ribosomal protein L7/L12;  &CP000117_...    36   0.99
AF105278_1(AF105278|pid:none) Homo sapiens 5c5-2 protein mRNA, c...    36   0.99
AP008957_1721(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...    35   1.3
CP000806_222(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul...    35   1.3
(B2KEN2) RecName: Full=50S ribosomal protein L7/L12;  &CP001055_...    35   1.3
(P36255) RecName: Full=50S ribosomal protein L7/L12;  &A64240(A6...    35   1.3
(A0T0Q7) RecName: Full=50S ribosomal protein L12, chloroplastic;...    35   1.3
EF083543_1(EF083543|pid:none) Picea sitchensis clone WS02723_F09...    35   1.7
AP011115_1653(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp...    35   2.2
(Q7NK76) RecName: Full=50S ribosomal protein L7/L12;  &BA000045_...    35   2.2
(P41189) RecName: Full=50S ribosomal protein L7/L12;  &U09675_2(...    35   2.2
(Q8YLJ5) RecName: Full=50S ribosomal protein L7/L12;  &AG2468(AG...    35   2.2
(Q7VDY8) RecName: Full=50S ribosomal protein L7/L12;  &AE017126_...    35   2.2
DQ084046_1(DQ084046|pid:none) Oxyuranus scutellatus mitochondria...    34   2.9
CP001601_365(CP001601|pid:none) Corynebacterium aurimucosum ATCC...    34   2.9
(A3Q974) RecName: Full=50S ribosomal protein L7/L12;  &CP000606_...    34   3.8
CR382136_771(CR382136|pid:none) Debaryomyces hansenii strain CBS...    34   3.8
(B1XJG9) RecName: Full=50S ribosomal protein L7/L12;  &CP000951_...    34   3.8
AB292635_1(AB292635|pid:none) Eptatretus burgeri EbRAR2 mRNA for...    34   3.8
(A0T0C0) RecName: Full=50S ribosomal protein L12, chloroplastic;...    34   3.8
AE017220_4036(AE017220|pid:none) Salmonella enterica subsp. ente...    34   3.8
(B5Y931) RecName: Full=50S ribosomal protein L7/L12;  &CP001145_...    34   3.8
(A9R0H7) RecName: Full=50S ribosomal protein L7/L12;  &CP000901_...    33   4.9
(A8G8E6) RecName: Full=50S ribosomal protein L7/L12;  &CP000826_...    33   4.9
(Q8DUG9) RecName: Full=50S ribosomal protein L7/L12;  &AE014133_...    33   4.9
AP008971_1330(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA...    33   6.4
AM910996_416(AM910996|pid:none) Plasmodium knowlesi strain H chr...    33   6.4
AF040570_2(AF040570|pid:none) Amycolatopsis mediterranei rifamyc...    33   6.4
(Q65W43) RecName: Full=50S ribosomal protein L7/L12;  &AE016827_...    33   6.4
(Q8A468) RecName: Full=50S ribosomal protein L7/L12;  &AE015928_...    33   6.4
AL844506_188(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    33   6.4
AM910986_105(AM910986|pid:none) Plasmodium knowlesi strain H chr...    33   6.4
AP010872_500(AP010872|pid:none) Candidatus Ishikawaella capsulat...    33   6.4
(Q1WST5) RecName: Full=50S ribosomal protein L7/L12;  &CP000233_...    33   8.4
S31143(S31143) ribosomal protein L7/L12 - Mycobacterium leprae  ...    33   8.4

>AC116956_94(AC116956|pid:none) Dictyostelium discoideum chromosome
           2 map 1418423-1684967 strain AX4, complete sequence.
          Length = 182

 Score =  277 bits (709), Expect = 1e-73
 Identities = 152/182 (83%), Positives = 152/182 (83%)
 Frame = +1

Query: 37  MISRVSLNKCFSTLSKLKCNNNTLYSTRLFTTEPEKVNLKLTTIENGKSSTEVADLVERI 216
           MISRVSLNKCFSTLSKLKCNNNTLYSTRLFTTEPEKVNLKLTTIENGKSSTEVADLVERI
Sbjct: 1   MISRVSLNKCFSTLSKLKCNNNTLYSTRLFTTEPEKVNLKLTTIENGKSSTEVADLVERI 60

Query: 217 SKLSILDVMDLTQHLQKKLSIPDIDLSSLGSXXXXXXXXXXXXXXXXXVAKTDFQVRLVK 396
           SKLSILDVMDLTQHLQKKLSIPDIDLSSLGS                 VAKTDFQVRLVK
Sbjct: 61  SKLSILDVMDLTQHLQKKLSIPDIDLSSLGSGAPAGGAAPAAAAAPAAVAKTDFQVRLVK 120

Query: 397 VPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSXXXXXXXXXXXXXSGAELE 576
           VPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVS             SGAELE
Sbjct: 121 VPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSKEEAEKIIAKLKASGAELE 180

Query: 577 MA 582
           MA
Sbjct: 181 MA 182

Lambda     K      H
   0.314    0.131    0.344

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 770,086,597
Number of extensions: 11819699
Number of successful extensions: 33690
Number of sequences better than 10.0: 132
Number of HSP's gapped: 33671
Number of HSP's successfully gapped: 133
Length of query: 203
Length of database: 1,061,185,681
Length adjustment: 122
Effective length of query: 81
Effective length of database: 662,435,025
Effective search space: 53657237025
Effective search space used: 53657237025
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.67  gvh: 0.32  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.45  mip: 0.08
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: mitochondrial
	 24.0 %: nuclear
	 12.0 %: cytoplasmic
	  4.0 %: peroxisomal

>> prediction for Contig-U04257-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0