| Contig-U05052-1 |
| Contig ID |
Contig-U05052-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
691 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
3405379 |
| End point |
3406046 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
2 |
| Link to clone list |
U05052 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 7. 9 |
| Homology vs DNA |
Query= Contig-U05052-1 (Contig-U05052-1Q) /CSM_Contig/Contig-U05052-1Q.Seq.d
(691 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 841 0.0 2
(C93242) Dictyostelium discoideum slug cDNA, clone SSM866. 504 e-138 1
(AU075069) Dictyostelium discoideum slug cDNA, clone SSM866. 476 e-130 1
(AU072506) Dictyostelium discoideum slug cDNA, clone SSE739. 337 3e-88 1
(AC112168) Homo sapiens chromosome 5 clone CTC-412J3, WORKIN... 40 0.010 4
(CR749743) Zebrafish DNA sequence from clone DKEY-97M3 in li... 36 0.019 2
(CU469119) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.075 3
(EJ154664) 1092343802353 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.080 2
(AC109826) Homo sapiens BAC clone RP11-764D5 from 2, complet... 48 0.11 2
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 40 0.20 18
(AC193616) Pan troglodytes BAC clone CH251-332N21 from chrom... 38 0.28 5
(DQ347960) Glycine max clone GM24D13, *** SEQUENCING IN PROG... 42 0.32 4
(AC017091) Homo sapiens BAC clone RP11-506N2 from 4, complet... 38 0.39 5
(AC181112) Strongylocentrotus purpuratus clone R3-3043G09, W... 38 0.43 7
(CR626961) Zebrafish DNA sequence from clone CH211-160F13 in... 48 0.46 1
(CR555290) Zebrafish DNA sequence from clone DKEYP-10A10 in ... 48 0.46 1
(CR550301) Zebrafish DNA sequence from clone DKEY-160K9 in l... 48 0.46 1
(CR394538) Zebrafish DNA sequence from clone DKEY-189I22 in ... 48 0.46 1
(CR387984) Zebrafish DNA sequence from clone DKEY-230E6 in l... 48 0.46 1
(BS000606) Pan troglodytes chromosome Y clone:PTBY-009G03, c... 48 0.46 1
(AC139190) Pan troglodytes BAC clone RP43-12I19 from chromos... 48 0.46 1
(AC009233) Homo sapiens BAC clone RP11-356K22 from Y, comple... 48 0.46 1
(AB053222) Homo sapiens gene for N-acetylglucosaminyltransfe... 48 0.46 1
(CU582971) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.46 1
(AC055746) Homo sapiens chromosome 3 clone RP11-352M9, WORKI... 48 0.46 1
(ER284597) 1092343540050 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.46 1
(EJ312514) 1095403234683 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.46 1
(EJ115050) 1092343267675 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.46 1
(EJ017837) 1095439021503 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.46 1
(CT472342) Sus scrofa genomic clone CH242-517J13, genomic su... 48 0.46 1
(BJ323629) Dictyostelium discoideum cDNA clone:dda11p08, 5' ... 48 0.46 1
(CU856140) Zebrafish DNA sequence from clone CH1073-460D17 i... 38 0.53 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 0.59 9
(DT052180) COT_EU_H05 Fiber and Ovule of Xu-142 Lambda Zap E... 40 0.75 2
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 34 0.78 12
(AL161514) Arabidopsis thaliana DNA chromosome 4, contig fra... 38 0.87 3
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ... 34 0.88 2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 34 0.99 13
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 34 0.99 13
(CU019563) Zebrafish DNA sequence from clone DKEYP-87A6 in l... 36 1.1 5
(BH516240) BOHJI71TF BOHJ Brassica oleracea genomic clone BO... 32 1.1 3
(CS255973) Sequence 1 from Patent EP1621547. 34 1.2 2
(A58932) Sequence 1 from Patent WO9641877. 34 1.2 2
(AR916605) Sequence 1 from patent US 7056518. 34 1.2 2
(AR131271) Sequence 1 from patent US 6191270. 34 1.2 2
(DD010061) Immunogenic compositions comprising Liver Stage M... 34 1.2 2
(AX536317) Sequence 1 from Patent WO0238176. 34 1.2 2
(AX428966) Sequence 1 from Patent EP1201250. 34 1.2 2
(AJ007010) Plasmodium falciparum LSA-3 gene, strain K1. 34 1.2 2
(CS255974) Sequence 2 from Patent EP1621547. 34 1.2 2
(A58933) Sequence 2 from Patent WO9641877. 34 1.2 2
(AR916606) Sequence 2 from patent US 7056518. 34 1.2 2
(AR131272) Sequence 2 from patent US 6191270. 34 1.2 2
(DL142458) High Throughput Proteomics. 34 1.2 2
(AC188109) Pongo abelii chromosome UNK clone CH276-68H12, co... 46 1.8 1
(AL512594) Human DNA sequence from clone RP11-549A6 on chrom... 46 1.8 1
(AJ297815) Homo sapiens HSD17B7P1 gene. 46 1.8 1
(AC099571) Homo sapiens chromosome 1 clone RP11-438H8, compl... 46 1.8 1
(FP086615) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.8 1
(CU550658) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.8 1
(CU076087) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.8 1
(AL391558) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 1.8 1
(AC024287) Homo sapiens clone RP11-22O5, WORKING DRAFT SEQUE... 46 1.8 1
(FH199609) CHO_OF3067xn11r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 1.8 1
(FH199523) CHO_OF3067xn11f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 1.8 1
(EK289018) 1095462323820 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.8 1
(DX545342) GH_MBb0070H18f GH_MBb Gossypium hirsutum genomic ... 46 1.8 1
(DU096466) 111163 Tomato HindIII BAC Library Solanum lycoper... 46 1.8 1
(EG592781) SA626R silkglands of fifth instar larvae library ... 46 1.8 1
(EG592780) SA626F silkglands of fifth instar larvae library ... 46 1.8 1
(EG591824) F0256R one day old larvae library Antheraea mylit... 46 1.8 1
(EG591823) F0256F one day old larvae library Antheraea mylit... 46 1.8 1
(AC149472) Medicago truncatula clone mth2-77f21, complete se... 34 1.9 8
(AQ341929) RPCI11-113F7.TV RPCI-11 Homo sapiens genomic clon... 34 2.0 2
(AC178521) Strongylocentrotus purpuratus clone R3-3032D12, W... 40 2.0 3
(DQ366723) Uncultured Prochlorococcus marinus clone HF10-11H... 38 2.0 3
(CU179699) Zebrafish DNA sequence from clone CH211-185A18 in... 42 2.1 4
(CU633675) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.3 4
(AB325691) Schizosaccharomyces pombe SPBC460.01c, SPBC460.02... 38 2.4 3
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 2.5 16
(CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 34 2.6 18
(AC172428) Bos taurus clone CH240-525H17, WORKING DRAFT SEQU... 42 2.7 2
(AM429318) Vitis vinifera contig VV78X200575.15, whole genom... 34 2.7 3
(AC149914) Strongylocentrotus purpuratus clone R3-12I13, WOR... 36 2.8 9
(AC146769) Carollia perspicillata clone 110J12, WORKING DRAF... 40 2.8 2
(CU469202) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 2.9 9
(AC220401) Bos taurus clone CH240-360A23, WORKING DRAFT SEQU... 42 3.0 2
(CT954271) M.truncatula DNA sequence *** SEQUENCING IN PROGR... 32 3.2 8
(CU571398) Zebrafish DNA sequence from clone DKEY-110M18 in ... 36 3.2 5
(CU695008) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.3 2
(CR381583) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 3.4 2
(AC177526) Strongylocentrotus purpuratus clone R3-9P21, WORK... 36 3.4 4
(CR356243) Zebrafish DNA sequence from clone CH211-209O4 in ... 34 3.5 2
(BX323828) Zebrafish DNA sequence from clone DKEY-102M7 in l... 34 3.5 2
(AL935195) Zebrafish DNA sequence from clone CH211-277C7 in ... 34 3.5 2
(BX005329) Zebrafish DNA sequence from clone DKEY-222F2 in l... 34 3.5 2
(BX936450) Zebrafish DNA sequence from clone CH211-232I12 in... 34 3.5 2
(CU928074) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.5 2
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 34 3.5 2
(BX530031) Zebrafish DNA sequence from clone DKEY-175M17 in ... 34 3.5 2
(CR749170) Zebrafish DNA sequence from clone DKEY-190I13 in ... 34 3.6 2
(CT033768) Medicago truncatula chromosome 5 clone mte1-72b19... 32 3.6 2
(CW463793) fsbb001f212k16f0 Sorghum methylation filtered lib... 42 3.7 2
(CU463964) Zebrafish DNA sequence from clone CH211-150C8 in ... 34 3.9 2
(AM458766) Vitis vinifera contig VV78X044506.5, whole genome... 32 4.0 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 40 4.0 8
(ER657561) SB_BBc210-G14.F SB_BBc Sorghum bicolor genomic 5'... 42 4.1 2
(EI942582) VUH2-87H2TR VUUBBa (VUH2) Vigna unguiculata genom... 36 4.2 2
(AG869487) Oryza sativa Indica Group genomic DNA, BAC end se... 34 4.2 2
(AC124759) Mus musculus BAC clone RP23-132N7 from 1, complet... 36 4.3 4
(AZ535917) ENTBV14TR Entamoeba histolytica Sheared DNA Entam... 42 4.6 2
(BX182593) Danio rerio genomic clone DKEY-197A18, genomic su... 34 4.7 2
(CR315747) mte1-4G22RM1 BAC end, cultivar Jemalong A17 of Me... 32 4.8 2
(AC155104) Bos taurus clone CH240-36M14, WORKING DRAFT SEQUE... 36 4.8 6
(AP010096) Lotus japonicus genomic DNA, chromosome 1, clone:... 36 5.3 5
(AC184682) Strongylocentrotus purpuratus clone R3-3026B20, *... 38 5.6 2
(AC167458) Bos taurus clone CH240-197D1, WORKING DRAFT SEQUE... 40 5.8 4
(DU048132) 156239 Tomato HindIII BAC Library Solanum lycoper... 36 5.9 3
(AC146829) Carollia perspicillata clone 9I15, WORKING DRAFT ... 40 6.0 3
(AC232704) Solanum lycopersicum cv. Heinz 1706, chromosome 5... 38 6.1 5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 42 6.2 9
(AC236496) Xenopus laevis clone CH219-111G13, *** SEQUENCING... 38 6.4 3
(AL713983) Mouse DNA sequence from clone RP23-244C21 on chro... 40 6.6 6
(AC176278) Strongylocentrotus purpuratus clone R3-3060G11, W... 36 6.7 4
(CU694558) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 6.8 5
(AC180271) Strongylocentrotus purpuratus clone R3-3123M09, W... 36 6.9 6
(BX294188) Zebrafish DNA sequence from clone DKEY-255G14. 44 7.2 1
(AL929016) Zebrafish DNA sequence from clone DKEY-24J9 in li... 44 7.2 1
(AB083363) Oryzias latipes GnRH-R3 mRNA for gonadotropin-rel... 44 7.2 1
(BV305913) S236P6337RB6.T0 AlaskanMalamute Canis familiaris ... 44 7.2 1
(AC167817) Mus musculus BAC clone RP23-146N9 from chromosome... 44 7.2 1
(AC165255) Mus musculus BAC clone RP23-239B8 from chromosome... 44 7.2 1
(AC128633) Rattus norvegicus NOVECTOR CH230-239P1 (Children... 44 7.2 1
(AC125046) Mus musculus BAC clone RP23-349O22 from 6, comple... 44 7.2 1
(AC121894) Mus musculus BAC clone RP24-157H5 from 6, complet... 44 7.2 1
(AC118547) Mus musculus strain C57BL/6J clone rp23-3g4 map 1... 44 7.2 1
(AC117217) Mus musculus BAC clone RP23-318C3 from 17, comple... 44 7.2 1
(AC116804) Mus musculus chromosome 17, clone RP24-343C24, co... 44 7.2 1
(AC116499) Mus musculus chromosome 8, clone RP24-294M17, com... 44 7.2 1
(AC116473) Mus musculus chromosome 8, clone RP23-385E22, com... 44 7.2 1
(AC111034) Mus musculus chromosome 8, clone RP23-202K1, comp... 44 7.2 1
(U12400) Arabidopsis thaliana Columbia Dwarf1 (DWF1) mRNA, c... 44 7.2 1
(L38520) Arabidopsis thaliana diminuto (DIM) mRNA, complete ... 44 7.2 1
(BT000367) Arabidopsis thaliana unknown protein mRNA, comple... 44 7.2 1
(AY096472) Arabidopsis thaliana putative cell elongation pro... 44 7.2 1
(AY081286) Arabidopsis thaliana unknown protein mRNA, comple... 44 7.2 1
(AY072216) Arabidopsis thaliana putative cell elongation pro... 44 7.2 1
(AK226335) Arabidopsis thaliana mRNA for cell elongation pro... 44 7.2 1
(AB493623) Arabidopsis thaliana At3g19820 mRNA for hypotheti... 44 7.2 1
(AB025631) Arabidopsis thaliana genomic DNA, chromosome 3, P... 44 7.2 1
(AX505793) Sequence 488 from Patent WO0216655. 44 7.2 1
(GC881166) Sequence 196411 from patent US 6812339. 44 7.2 1
(GC881165) Sequence 196410 from patent US 6812339. 44 7.2 1
(GC881164) Sequence 196409 from patent US 6812339. 44 7.2 1
(GC702060) Sequence 17305 from patent US 6812339. 44 7.2 1
(GC697651) Sequence 12896 from patent US 6812339. 44 7.2 1
(CT476813) L.saxatilis DNA sequence from clone CH317-88D12. 44 7.2 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 7.2 1
(AP006197) Homo sapiens genomic DNA, chromosome 6, clone:RP1... 44 7.2 1
(AP006195) Homo sapiens genomic DNA, chromosome 6, clone:RP1... 44 7.2 1
(AP002530) Homo sapiens genomic DNA, chromosome 6q21, anti-o... 44 7.2 1
(AL359174) Human DNA sequence from clone RP11-423D17 on chro... 44 7.2 1
(AL357712) Human DNA sequence from clone GS1-756B1 on chromo... 44 7.2 1
(AL133457) Human DNA sequence from clone RP1-149C7 on chromo... 44 7.2 1
(AC103834) Homo sapiens chromosome 8, clone RP11-1081K18, co... 44 7.2 1
(AB041512) Homo sapiens genomic DNA, chromosome 6q21, clone:... 44 7.2 1
(AC161611) Mus musculus chromosome 6 clone RP23-34G2, WORKIN... 44 7.2 1
(AC103850) Homo sapiens chromosome 8 clone RP11-77B14 map 8,... 44 7.2 1
(CU928657) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.2 1
(AL139104) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 7.2 1
(AF481054) Mus musculus strain 129S6/SvEvTac chromosome 17 c... 44 7.2 1
(AB041992) Homo sapiens genomic DNA, chromosome 6q21, clone:... 44 7.2 1
(ER864461) PPTAH90TR Solanum tuberosum RHPOTKEY BAC ends Sol... 44 7.2 1
(EI972437) SB_BBc88-I02.F SB_BBc Sorghum bicolor genomic 5',... 44 7.2 1
(DE555965) Bombyx mori genomic DNA, Fosmid clone:GBMFno194_b... 44 7.2 1
(CW445529) fsbb001f170l17k0 Sorghum methylation filtered lib... 44 7.2 1
(CT085397) Sus scrofa genomic clone CH242-131D20, genomic su... 44 7.2 1
(AG392309) Mus musculus molossinus DNA, clone:MSMg01-210A04.... 44 7.2 1
(AG390322) Mus musculus molossinus DNA, clone:MSMg01-206O01.... 44 7.2 1
(ES055859) 087606_3704_3698 Arabidopsis ovule high throughpu... 44 7.2 1
(ES003955) 039540_2638_1545 Arabidopsis ovule high throughpu... 44 7.2 1
(EL212339) EB3RODY02IQPEF 8-day Arabidopsis seedlings, aeria... 44 7.2 1
(EG834170) EST_ssal_eve_46045 ssaleve thyroid Salmo salar cD... 44 7.2 1
(EG501545) AYBGS36TR pooled cDNA populations Arabidopsis tha... 44 7.2 1
(AV551466) Arabidopsis thaliana cDNA clone:RZ127b09R, 5' end. 44 7.2 1
(AV524408) Arabidopsis thaliana cDNA clone:APD01f06R, 5' end. 44 7.2 1
(DR369784) 6913498 CERES-AN10 Arabidopsis thaliana cDNA clon... 44 7.2 1
(DR355700) 11074823 CERES-AN65 Arabidopsis thaliana cDNA clo... 44 7.2 1
(DB663196) Saccharomyces cerevisiae mRNA, clone: Y083_N22_F.... 44 7.2 1
(DB441657) Asterina pectinifera cDNA clone:apg40k15, 3' end. 44 7.2 1
(DB441500) Asterina pectinifera cDNA clone:apg40d18, 3' end. 44 7.2 1
(DB441233) Asterina pectinifera cDNA clone:apg39i05, 3' end. 44 7.2 1
(DB441108) Asterina pectinifera cDNA clone:apg39c19, 3' end. 44 7.2 1
(DB439806) Asterina pectinifera cDNA clone:apg35j21, 3' end. 44 7.2 1
(DB437971) Asterina pectinifera cDNA clone:apg30j10, 3' end. 44 7.2 1
(DB437874) Asterina pectinifera cDNA clone:apg30f05, 3' end. 44 7.2 1
(DB435663) Asterina pectinifera cDNA clone:apg24f04, 3' end. 44 7.2 1
(DB433678) Asterina pectinifera cDNA clone:apg18o21, 3' end. 44 7.2 1
(DB433508) Asterina pectinifera cDNA clone:apg18h17, 3' end. 44 7.2 1
(DB433431) Asterina pectinifera cDNA clone:apg18e06, 3' end. 44 7.2 1
(DB432756) Asterina pectinifera cDNA clone:apg16g15, 3' end. 44 7.2 1
(DB431911) Asterina pectinifera cDNA clone:apg14b05, 3' end. 44 7.2 1
(DB431198) Asterina pectinifera cDNA clone:apg12b13, 3' end. 44 7.2 1
(DB430831) Asterina pectinifera cDNA clone:apg11b13, 3' end. 44 7.2 1
(DB429039) Asterina pectinifera cDNA clone:apg6c16, 3' end. 44 7.2 1
(DB423376) Asterina pectinifera cDNA clone:apg30j10, 5' end. 44 7.2 1
(DB423278) Asterina pectinifera cDNA clone:apg30f05, 5' end. 44 7.2 1
(DB417661) Asterina pectinifera cDNA clone:apg15c01, 5' end. 44 7.2 1
(DB416190) Asterina pectinifera cDNA clone:apg11b13, 5' end. 44 7.2 1
(CK119450) 212f11.p1 AtM1 Arabidopsis thaliana cDNA clone MP... 44 7.2 1
(BU636191) 005D03 Infected Arabidopsis Leaf Arabidopsis thal... 44 7.2 1
(BM879832) ku01d12.y1 Strongyloides ratti PA female naive pA... 44 7.2 1
(AA728659) 33713 CD4-6 Arabidopsis thaliana cDNA clone K3F6T... 44 7.2 1
(T21567) 3575 Lambda-PRL2 Arabidopsis thaliana cDNA clone 94... 44 7.2 1
(GR116171) CCBG7338.g1 CCBG Mimulus guttatus IM62 floral bud... 44 7.2 1
(FE791447) CCAG18118.g1 CCAG Petrolisthes cinctipes heart, g... 44 7.2 1
(FD763108) Afi06_20_B12_C014.g1 Aristolochia fimbriata mixed... 44 7.2 1
(FC818516) Sr_pAMT7_012d06_T7 S. ratti mixed stage pAMP Stro... 44 7.2 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 44 7.2 1
(AC006518) Homo sapiens 12 BAC RPCI11-144O23 (Roswell Park C... 34 7.5 5
(ES510183) BIG_AF_18000 Brine Shrimp embryos, 10 hours after... 36 7.5 2
(FF625159) G825P5313FD6.T0 Acorn worm normalized gastrula pE... 34 7.5 3
(AC193940) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 34 7.7 8
(AC170960) Bos taurus clone CH240-253B2, WORKING DRAFT SEQUE... 36 7.7 5
(CU570929) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 7.8 4
(AP003259) Oryza sativa Japonica Group genomic DNA, chromoso... 34 7.9 5
(CP001083) Clostridium botulinum Ba4 str. 657, complete genome. 32 8.0 18
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete... 40 8.0 17
(AC220033) Bos taurus clone CH240-315M22, WORKING DRAFT SEQU... 36 8.1 5
(BX914195) Zebrafish DNA sequence from clone CH211-170L6 in ... 36 8.2 6
(CR936559) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 8.2 5
(AC224538) Bos taurus clone CH240-483B22, WORKING DRAFT SEQU... 42 8.2 3
(CT583730) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 8.6 8
(AC232102) Solanum tuberosum strain Diploid genotype RH89-03... 36 8.7 3
(BX538350) Cryptosporidium parvum chromosome 6, complete seq... 36 9.0 6
(AC069289) Homo sapiens chromosome 7 clone RP11-487K9, WORKI... 38 9.5 4
(FP090905) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 9.8 3
>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875
strain AX4, complete sequence.
Length = 541399
Score = 841 bits (424), Expect(2) = 0.0
Identities = 424/424 (100%)
Strand = Plus / Minus
Query: 181 gtatccagttaaccaagtttatagtgttattataaaagttgaagattataaagaattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340828 gtatccagttaaccaagtttatagtgttattataaaagttgaagattataaagaattttt 340769
Query: 241 accattttgtttaaattcaacaatattgaaaagagaaaaagataaaaatcattttgaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340768 accattttgtttaaattcaacaatattgaaaagagaaaaagataaaaatcattttgaagc 340709
Query: 301 tgaattagaagttggacaaggtacgattaaagaaagttatgttagtaaagttgtatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340708 tgaattagaagttggacaaggtacgattaaagaaagttatgttagtaaagttgtatataa 340649
Query: 361 agagaacaaattcattgaatccactgcaactgatacaccactatttcataaattaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340648 agagaacaaattcattgaatccactgcaactgatacaccactatttcataaattaattaa 340589
Query: 421 tacttggagttttaaacaaggtcaaactccaaataccaccattgctcattgtaaattaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340588 tacttggagttttaaacaaggtcaaactccaaataccaccattgctcattgtaaattaat 340529
Query: 481 atatcaattcaaatcaccattctatgcaactttaatggaaaatttctttgcctcttcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340528 atatcaattcaaatcaccattctatgcaactttaatggaaaatttctttgcctcttcttt 340469
Query: 541 agatgtaatgattaattctttcgataaacgttgtgatgaattatatggtagttcaaattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340468 agatgtaatgattaattctttcgataaacgttgtgatgaattatatggtagttcaaattc 340409
Query: 601 tttc 604
||||
Sbjct: 340408 tttc 340405
Score = 363 bits (183), Expect(2) = 0.0
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1 aaaatattcaaatttagttataccaaaaacaaagtcaatccttaaaagtggttgcaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341093 aaaatattcaaatttagttataccaaaaacaaagtcaatccttaaaagtggttgcaataa 341034
Query: 61 taatattggatatggagatagatactttttcaataaattatttggtagcaacgatgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341033 taatattggatatggagatagatactttttcaataaattatttggtagcaacgatgcaag 340974
Query: 121 tgatacacataatcaaccaaccacaaaaatagttacaaaagaaatgactaaagaattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340973 tgatacacataatcaaccaaccacaaaaatagttacaaaagaaatgactaaagaattaaa 340914
Query: 181 gta 183
|||
Sbjct: 340913 gta 340911
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 942,577,860
Number of extensions: 61624197
Number of successful extensions: 5426938
Number of sequences better than 10.0: 239
Length of query: 691
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 667
Effective length of database: 102,084,959,077
Effective search space: 68090667704359
Effective search space used: 68090667704359
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.31 |
| Homology vs Protein |
Query= Contig-U05052-1 (Contig-U05052-1Q) /CSM_Contig/Contig-U05052-1Q.Seq.d
(691 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q556V1) RecName: Full=Coenzyme Q-binding protein COQ10, mitocho... 404 e-111
EU965238_1(EU965238|pid:none) Zea mays clone 284715 protein COQ1... 105 1e-21
BT037446_1(BT037446|pid:none) Zea mays full-length cDNA clone ZM... 105 1e-21
AF370345_1(AF370345|pid:none) Arabidopsis thaliana unknown prote... 102 1e-20
AY087949_1(AY087949|pid:none) Arabidopsis thaliana clone 39872 m... 102 1e-20
DQ336954_17(DQ336954|pid:none) Glycine max cultivar Williams 82 ... 93 7e-18
CR940352_789(CR940352|pid:none) Theileria annulata strain Ankara... 92 1e-17
AY814292_1(AY814292|pid:none) Schistosoma japonicum SJCHGC04817 ... 92 1e-17
CR382127_93(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 91 4e-17
(Q6PBN4) RecName: Full=Probable protein COQ10, mitochondrial; Fl... 80 5e-14
(Q5I0I9) RecName: Full=Protein COQ10 B, mitochondrial; Flags: Pr... 78 3e-13
AC183496_34(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 78 3e-13
CU459003_1531(CU459003|pid:none) Magnetospirillum gryphiswaldens... 77 4e-13
BC116072_1(BC116072|pid:none) Bos taurus coenzyme Q10 homolog B ... 77 4e-13
FM992692_323(FM992692|pid:none) Candida dubliniensis CD36 chromo... 77 4e-13
(Q6DFA6) RecName: Full=Protein COQ10 A, mitochondrial; Flags: Pr... 77 5e-13
(Q9H8M1) RecName: Full=Protein COQ10 B, mitochondrial; Flags: Pr... 77 7e-13
AK294093_1(AK294093|pid:none) Homo sapiens cDNA FLJ52258 complet... 77 7e-13
CP000230_1871(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 76 1e-12
AK136258_1(AK136258|pid:none) Mus musculus in vitro fertilized e... 75 1e-12
(Q3THF9) RecName: Full=Protein COQ10 B, mitochondrial; Flags: Pr... 75 1e-12
AX118921_1(AX118921|pid:none) Sequence 85 from Patent WO0129221. 74 3e-12
AY358861_1(AY358861|pid:none) Homo sapiens clone DNA142949 RFLT6... 74 3e-12
AK057014_1(AK057014|pid:none) Homo sapiens cDNA FLJ32452 fis, cl... 74 3e-12
CQ797920_1(CQ797920|pid:none) Sequence 18 from Patent WO20040296... 74 3e-12
CR761163_1(CR761163|pid:none) Xenopus tropicalis finished cDNA, ... 74 3e-12
BC047444_1(BC047444|pid:none) Homo sapiens coenzyme Q10 homolog ... 74 3e-12
BC114817_1(BC114817|pid:none) Bos taurus coenzyme Q10 homolog A ... 74 4e-12
(Q6GNP0) RecName: Full=Protein COQ10 B, mitochondrial; Flags: Pr... 74 4e-12
(Q567E6) RecName: Full=Protein COQ10 B, mitochondrial; Flags: Pr... 74 4e-12
(Q8MLL3) RecName: Full=Protein COQ10, mitochondrial; Flags: Prec... 74 6e-12
BT011406_1(BT011406|pid:none) Drosophila melanogaster AT21859 fu... 74 6e-12
BT047909_1(BT047909|pid:none) Salmo salar clone ssal-rgb-553-237... 72 1e-11
CP000084_930(CP000084|pid:none) Candidatus Pelagibacter ubique H... 70 5e-11
FN392321_275(FN392321|pid:none) Pichia pastoris GS115 chromosome... 70 6e-11
CR628337_411(CR628337|pid:none) Legionella pneumophila str. Lens... 69 2e-10
CR382138_814(CR382138|pid:none) Debaryomyces hansenii strain CBS... 68 3e-10
AL591688_1459(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 67 7e-10
CP000675_427(CP000675|pid:none) Legionella pneumophila str. Corb... 67 7e-10
CP001280_511(CP001280|pid:none) Methylocella silvestris BL2, com... 67 7e-10
CP000738_1076(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 66 9e-10
BX511039_7(BX511039|pid:none) Ustilago maydis p-locus on chromos... 66 1e-09
CP000908_2762(CP000908|pid:none) Methylobacterium extorquens PA1... 65 2e-09
CP001562_589(CP001562|pid:none) Bartonella grahamii as4aup, comp... 65 3e-09
CP000264_2231(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 64 3e-09
AE017345_170(AE017345|pid:none) Cryptococcus neoformans var. neo... 64 4e-09
AM920433_567(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 64 4e-09
AM270149_10(AM270149|pid:none) Aspergillus niger contig An07c032... 64 6e-09
CP000157_1261(CP000157|pid:none) Erythrobacter litoralis HTCC259... 63 1e-08
CP000499_228(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 63 1e-08
AE007869_1415(AE007869|pid:none) Agrobacterium tumefaciens str. ... 63 1e-08
CP001001_2143(CP001001|pid:none) Methylobacterium radiotolerans ... 62 1e-08
CP001349_6251(CP001349|pid:none) Methylobacterium nodulans ORS 2... 62 1e-08
CP000680_3603(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 62 2e-08
BA000012_301(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 62 2e-08
BX897699_571(BX897699|pid:none) Bartonella henselae strain Houst... 61 3e-08
CP000009_2228(CP000009|pid:none) Gluconobacter oxydans 621H, com... 61 3e-08
CP000926_4703(CP000926|pid:none) Pseudomonas putida GB-1, comple... 61 4e-08
CT573326_692(CT573326|pid:none) Pseudomonas entomophila str. L48... 61 4e-08
CP000438_5076(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 60 5e-08
CP000633_1552(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 60 5e-08
CU928175_301(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 60 5e-08
(O68560) RecName: Full=UPF0083 protein PA4767; &AE004091_4763(A... 60 5e-08
CP000949_699(CP000949|pid:none) Pseudomonas putida W619, complet... 60 6e-08
CP000744_5413(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 60 8e-08
CP001157_4157(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 59 1e-07
AM260525_767(AM260525|pid:none) Bartonella tribocorum CIP 105476... 59 1e-07
CP001020_1029(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 58 2e-07
AP007151_1358(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 58 2e-07
CR380951_96(CR380951|pid:none) Candida glabrata strain CBS138 ch... 58 3e-07
CP001074_2004(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 57 4e-07
EU747040_1(EU747040|pid:none) Acidithiobacillus caldus oligoketi... 57 5e-07
CP000781_3863(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 57 5e-07
CP001607_1319(CP001607|pid:none) Aggregatibacter aphrophilus NJ8... 57 7e-07
CP000094_756(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 56 9e-07
CP001408_2503(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 56 9e-07
BX571965_2155(BX571965|pid:none) Burkholderia pseudomallei strai... 56 9e-07
CP000539_2453(CP000539|pid:none) Acidovorax sp. JS42, complete g... 56 1e-06
CP000269_2037(CP000269|pid:none) Janthinobacterium sp. Marseille... 56 1e-06
CP000394_1189(CP000394|pid:none) Granulibacter bethesdensis CGDN... 56 1e-06
AE004439_165(AE004439|pid:none) Pasteurella multocida subsp. mul... 56 1e-06
AM236080_2257(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 55 2e-06
CP000569_259(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 55 2e-06
AM286415_948(AM286415|pid:none) Yersinia enterocolitica subsp. e... 55 2e-06
CP000086_2014(CP000086|pid:none) Burkholderia thailandensis E264... 55 2e-06
CP000868_1271(CP000868|pid:none) Burkholderia multivorans ATCC 1... 55 2e-06
CP000304_3254(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 55 2e-06
CP000380_591(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 55 2e-06
CP000783_610(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 55 2e-06
AM181176_5158(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 55 2e-06
CP000377_1367(CP000377|pid:none) Silicibacter sp. TM1040, comple... 55 3e-06
CU928167_450(CU928167|pid:none) Kluyveromyces thermotolerans str... 55 3e-06
AP009384_1748(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 54 3e-06
CP000614_1879(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 54 3e-06
T16757(T16757)hypothetical protein R144.3 - Caenorhabditis elegans 54 3e-06
CP000937_52(CP000937|pid:none) Francisella philomiragia subsp. p... 54 3e-06
BX571870_147(BX571870|pid:none) Photorhabdus luminescens subsp. ... 54 5e-06
CP000109_1409(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 54 5e-06
AE009952_3032(AE009952|pid:none) Yersinia pestis KIM, complete g... 54 5e-06
CP000720_2851(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 54 5e-06
CP001503_1240(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 54 5e-06
CP001132_448(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 54 6e-06
AF490983_4(AF490983|pid:none) Azotobacter vinelandii L-lactate p... 53 8e-06
CP001391_916(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 53 8e-06
CP000058_4020(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 53 8e-06
CP000250_2877(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 53 1e-05
CU928162_2985(CU928162|pid:none) Escherichia coli ED1a chromosom... 53 1e-05
AB0835(AB0835) conserved hypothetical protein STY2873 [imported]... 53 1e-05
CP000544_1456(CP000544|pid:none) Halorhodospira halophila SL1, c... 53 1e-05
CP000880_233(CP000880|pid:none) Salmonella enterica subsp. arizo... 52 1e-05
CP001127_2687(CP001127|pid:none) Salmonella enterica subsp. ente... 52 1e-05
CP001052_2377(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 52 1e-05
AC159451_16(AC159451|pid:none) Trypanosoma brucei chromosome 8 c... 52 1e-05
CP000026_2376(CP000026|pid:none) Salmonella enterica subsp. ente... 52 1e-05
BX572601_132(BX572601|pid:none) Rhodopseudomonas palustris CGA00... 52 1e-05
CP000821_1406(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 52 1e-05
CP001096_2803(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 52 1e-05
AE017197_152(AE017197|pid:none) Rickettsia typhi str. Wilmington... 52 2e-05
AL844507_68(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 52 2e-05
CP000076_804(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 52 2e-05
CP000961_1508(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 52 2e-05
AP009240_2902(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 51 3e-05
CP000450_565(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 51 3e-05
CP000510_1529(CP000510|pid:none) Psychromonas ingrahamii 37, com... 51 3e-05
CP000143_1376(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 51 3e-05
CP000947_1731(CP000947|pid:none) Haemophilus somnus 2336, comple... 51 4e-05
AE014075_3066(AE014075|pid:none) Escherichia coli CFT073, comple... 51 4e-05
AE014299_1448(AE014299|pid:none) Shewanella oneidensis MR-1, com... 51 4e-05
CP000822_3835(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 51 4e-05
CP000089_2318(CP000089|pid:none) Dechloromonas aromatica RCB, co... 51 4e-05
CP000931_1337(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 50 5e-05
AE005674_2678(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 50 5e-05
CU633749_1622(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 50 5e-05
CP001644_1342(CP001644|pid:none) Ralstonia pickettii 12D chromos... 50 5e-05
CP000563_1289(CP000563|pid:none) Shewanella baltica OS155, compl... 50 5e-05
AE017196_942(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 50 5e-05
CP000083_3709(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 50 5e-05
CP001025_1879(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 50 7e-05
CP001635_2717(CP001635|pid:none) Variovorax paradoxus S110 chrom... 50 7e-05
CU640366_314(CU640366|pid:none) Podospora anserina genomic DNA c... 50 7e-05
CP000283_2574(CP000283|pid:none) Rhodopseudomonas palustris BisB... 50 7e-05
CP000362_2569(CP000362|pid:none) Roseobacter denitrificans OCh 1... 50 7e-05
CP000851_1281(CP000851|pid:none) Shewanella pealeana ATCC 700345... 50 9e-05
AJ749949_1185(AJ749949|pid:none) Francisella tularensis subsp. t... 50 9e-05
CP000115_1433(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 50 9e-05
AL161546_46(AL161546|pid:none) Arabidopsis thaliana DNA chromoso... 50 9e-05
CP000444_2831(CP000444|pid:none) Shewanella sp. MR-7, complete g... 50 9e-05
CP000608_998(CP000608|pid:none) Francisella tularensis subsp. tu... 50 9e-05
AE016825_3463(AE016825|pid:none) Chromobacterium violaceum ATCC ... 49 1e-04
CP000606_1266(CP000606|pid:none) Shewanella loihica PV-4, comple... 49 1e-04
AP006725_3810(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 49 1e-04
CU914168_1415(CU914168|pid:none) Ralstonia solanacearum strain I... 49 1e-04
CP000503_2839(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 49 1e-04
CP000237_310(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 49 1e-04
AL954747_429(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 49 1e-04
CP000647_2886(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 49 1e-04
CP001321_653(CP001321|pid:none) Haemophilus parasuis SH0165, com... 49 2e-04
CP000964_1158(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 49 2e-04
CP000644_2711(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 49 2e-04
CP001654_3165(CP001654|pid:none) Dickeya dadantii Ech703, comple... 48 2e-04
CP000886_3306(CP000886|pid:none) Salmonella enterica subsp. ente... 48 2e-04
CP000301_2544(CP000301|pid:none) Rhodopseudomonas palustris BisB... 48 2e-04
CR860965_1(CR860965|pid:none) Pongo abelii mRNA; cDNA DKFZp469E1... 48 3e-04
CP000661_1034(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 48 3e-04
CP000463_2729(CP000463|pid:none) Rhodopseudomonas palustris BisA... 47 4e-04
CP000352_1454(CP000352|pid:none) Ralstonia metallidurans CH34, c... 47 4e-04
CU695238_264(CU695238|pid:none) Ralstonia solanacearum strain Mo... 47 4e-04
AM942759_1886(AM942759|pid:none) Proteus mirabilis strain HI4320... 47 4e-04
CP001150_1093(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 47 4e-04
CP000555_1617(CP000555|pid:none) Methylibium petroleiphilum PM1,... 47 4e-04
CP000030_572(CP000030|pid:none) Anaplasma marginale str. St. Mar... 47 6e-04
AY774498_1(AY774498|pid:none) Synthetic construct Francisella tu... 47 6e-04
AE003852_833(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 47 6e-04
AP008981_87(AP008981|pid:none) Orientia tsutsugamushi str. Ikeda... 47 7e-04
CP000884_2996(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 47 7e-04
CP000488_343(CP000488|pid:none) Candidatus Ruthia magnifica str.... 47 7e-04
AE017282_1599(AE017282|pid:none) Methylococcus capsulatus str. B... 46 0.001
AM260479_1982(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 46 0.001
CP000388_1728(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 45 0.002
AM494475_389(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 45 0.002
CP000507_2379(CP000507|pid:none) Shewanella amazonensis SB2B, co... 45 0.002
AP007255_4260(AP007255|pid:none) Magnetospirillum magneticum AMB... 45 0.002
CP001600_2957(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 45 0.003
AM426652_1(AM426652|pid:none) Vitis vinifera contig VV78X169859.... 45 0.003
BA000031_645(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 44 0.004
AM167904_1752(AM167904|pid:none) Bordetella avium 197N complete ... 44 0.004
BX950851_826(BX950851|pid:none) Erwinia carotovora subsp. atrose... 44 0.004
CP001013_2049(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 44 0.004
CP000514_3331(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 44 0.005
AM902716_2524(AM902716|pid:none) Bordetella petrii strain DSM 12... 44 0.006
CP001154_776(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 44 0.006
CP001103_1794(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 43 0.008
CP000116_1755(CP000116|pid:none) Thiobacillus denitrificans ATCC... 42 0.014
(Q9USM9) RecName: Full=Coenzyme Q-binding protein coq10, mitocho... 42 0.014
CP001010_459(CP001010|pid:none) Polynucleobacter necessarius sub... 42 0.018
CR954214_300(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 42 0.018
BX248583_517(BX248583|pid:none) Blochmannia floridanus complete ... 41 0.031
FM954972_578(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 41 0.031
BX640415_118(BX640415|pid:none) Bordetella pertussis strain Toha... 41 0.031
CP000655_1417(CP000655|pid:none) Polynucleobacter necessarius su... 40 0.052
CP000236_454(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 40 0.052
CU459003_1492(CU459003|pid:none) Magnetospirillum gryphiswaldens... 40 0.068
CP000246_195(CP000246|pid:none) Clostridium perfringens ATCC 131... 40 0.089
CP000789_1054(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 39 0.12
CP000934_3292(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 39 0.15
CP000697_338(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 38 0.26
AY552545_119(AY552545|pid:none) Uncultured marine gamma proteoba... 37 0.44
BA000016_216(BA000016|pid:none) Clostridium perfringens str. 13 ... 37 0.44
CP000312_189(CP000312|pid:none) Clostridium perfringens SM101, c... 37 0.58
CP001227_533(CP001227|pid:none) Rickettsia peacockii str. Rustic... 36 0.97
CP000848_412(CP000848|pid:none) Rickettsia rickettsii str. 'Shei... 36 0.97
AL157959_900(AL157959|pid:none) Neisseria meningitidis serogroup... 36 0.98
AE004969_352(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 36 0.98
AE002098_769(AE002098|pid:none) Neisseria meningitidis MC58, com... 36 0.98
AM502234_117(AM502234|pid:none) Leishmania infantum chromosome 16. 36 1.3
AM421808_711(AM421808|pid:none) Neisseria meningitidis serogroup... 35 1.7
FM992694_108(FM992694|pid:none) Candida dubliniensis CD36 chromo... 35 1.7
CT005255_117(CT005255|pid:none) Leishmania major strain Friedlin... 35 2.2
AE017333_3863(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 35 2.9
AE000511_354(AE000511|pid:none) Helicobacter pylori 26695, compl... 34 3.7
CP000103_349(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 34 3.7
CP001443_7(CP001443|pid:none) Borrelia burgdorferi WI91-23 plasm... 34 3.7
AM910990_67(AM910990|pid:none) Plasmodium knowlesi strain H chro... 34 3.7
DQ832717_40(DQ832717|pid:none) Phytophthora sojae mitochondrion,... 34 4.9
(Q6GJ46) RecName: Full=Putative antiporter subunit mnhB2; AltNam... 34 4.9
CP001217_1054(CP001217|pid:none) Helicobacter pylori P12, comple... 33 6.4
CP000383_2564(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 33 6.4
CP000776_1048(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 33 6.4
>(Q556V1) RecName: Full=Coenzyme Q-binding protein COQ10,
mitochondrial; Flags: Precursor;
&AC116984_133(AC116984|pid:none)
Length = 205
Score = 404 bits (1037), Expect = e-111
Identities = 196/196 (100%), Positives = 196/196 (100%)
Frame = +2
Query: 2 KYSNLVIPKTKSILKSGCNNNIGYGDRYFFNKLFGSNDASDTHNQPTTKIVTKEMTKELK 181
KYSNLVIPKTKSILKSGCNNNIGYGDRYFFNKLFGSNDASDTHNQPTTKIVTKEMTKELK
Sbjct: 3 KYSNLVIPKTKSILKSGCNNNIGYGDRYFFNKLFGSNDASDTHNQPTTKIVTKEMTKELK 62
Query: 182 YPVNQVYSVIIKVEDYKEFLPFCLNSTILKREKDKNHFEAELEVGQGTIKESYVSKVVYK 361
YPVNQVYSVIIKVEDYKEFLPFCLNSTILKREKDKNHFEAELEVGQGTIKESYVSKVVYK
Sbjct: 63 YPVNQVYSVIIKVEDYKEFLPFCLNSTILKREKDKNHFEAELEVGQGTIKESYVSKVVYK 122
Query: 362 ENKFIESTATDTPLFHKLINTWSFKQGQTPNTTIAHCKLIYQFKSPFYATLMENFFASSL 541
ENKFIESTATDTPLFHKLINTWSFKQGQTPNTTIAHCKLIYQFKSPFYATLMENFFASSL
Sbjct: 123 ENKFIESTATDTPLFHKLINTWSFKQGQTPNTTIAHCKLIYQFKSPFYATLMENFFASSL 182
Query: 542 DVMINSFDKRCDELYG 589
DVMINSFDKRCDELYG
Sbjct: 183 DVMINSFDKRCDELYG 198
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 912,726,129
Number of extensions: 16147998
Number of successful extensions: 38803
Number of sequences better than 10.0: 228
Number of HSP's gapped: 38699
Number of HSP's successfully gapped: 229
Length of query: 230
Length of database: 1,061,185,681
Length adjustment: 124
Effective length of query: 106
Effective length of database: 655,898,129
Effective search space: 69525201674
Effective search space used: 69525201674
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |