| Contig-U05787-1 |
| Contig ID |
Contig-U05787-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
620 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
2347437 |
| End point |
2346814 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U05787 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11. 6 |
| Homology vs DNA |
Query= Contig-U05787-1 (Contig-U05787-1Q) /CSM_Contig/Contig-U05787-1Q.Seq.d
(620 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU074697) Dictyostelium discoideum slug cDNA, clone SSL573. 172 9e-64 2
(EK498372) 1095505197154 Global-Ocean-Sampling_GS-32-01-01-1... 52 0.024 1
(AC163197) Bos taurus clone CH240-74A23, WORKING DRAFT SEQUE... 44 0.024 2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 34 0.028 16
(CP000048) Borrelia hermsii DAH, complete genome. 32 0.041 14
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.049 12
(AC161851) Bos taurus clone CH240-99E24, WORKING DRAFT SEQUE... 44 0.049 2
(EK274769) 1095462272251 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.095 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 42 0.15 16
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 38 0.16 2
(BX324130) Zebrafish DNA sequence from clone DKEY-30J16 in l... 40 0.18 2
(AE017263) Mesoplasma florum L1 complete genome. 36 0.19 13
(CR848041) Zebrafish DNA sequence from clone DKEY-4K21 in li... 48 0.19 4
(AL831812) Oryza sativa chromosome 12, . BAC OSJNBa0054H15 o... 38 0.22 2
(EJ073624) 1095458103663 Global-Ocean-Sampling_GS-26-01-01-1... 44 0.23 2
(AC208960) Nomascus leucogenys chromosome UNK clone CH271-17... 44 0.29 6
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 0.31 9
(BX119963) Zebrafish DNA sequence from clone DKEY-6A5 in lin... 38 0.36 8
(CU138573) Zebrafish DNA sequence from clone CH211-121H6. 48 0.38 1
(CR751567) Zebrafish DNA sequence from clone DKEY-47I3 in li... 48 0.38 1
(BX248743) Zebrafish DNA sequence from clone CH211-202P11. 48 0.38 1
(BX248308) Zebrafish DNA sequence from clone DKEY-247M21 in ... 48 0.38 1
(AC167467) Mus musculus BAC clone RP23-158E17 from chromosom... 48 0.38 1
(AC107851) Mus musculus chromosome 9, clone RP23-451B4, comp... 48 0.38 1
(AC129568) Mus musculus chromosome 9 clone RP23-81M22 map 9,... 48 0.38 1
(AC100672) Mus musculus clone RP23-167J9, LOW-PASS SEQUENCE ... 48 0.38 1
(CU207240) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.38 1
(BX248237) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 0.38 1
(ER419429) 1092963694313 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.38 1
(EJ520728) 1092955137636 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.38 1
(CR039353) Forward strand read from insert in 5'HPRT inserti... 48 0.38 1
(CP000411) Oenococcus oeni PSU-1, complete genome. 48 0.38 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 0.41 19
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 0.41 19
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 34 0.49 12
(CP000609) Methanococcus maripaludis C5, complete genome. 36 0.53 12
(DY791063) Sf1M08920-3-1 Spodoptera frugiperda Midgut cDNA L... 42 0.66 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.70 9
(AC109882) Rattus norvegicus clone CH230-310L5, *** SEQUENCI... 46 0.70 2
(CU861625) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.79 2
(AC102096) Mus musculus chromosome 18, clone RP23-37J18, com... 36 0.79 2
(AC102859) Mus musculus clone RP24-511B3, LOW-PASS SEQUENCE ... 44 0.83 2
(EF125210) Homo sapiens clone TA68 MORC family CW-type zinc ... 40 0.86 2
(CT019891) KBrH130C15 genomic clone, KBrH (HindIII) BAC libr... 40 0.91 2
(AC093970) Rattus norvegicus clone CH230-5K17, *** SEQUENCIN... 38 0.96 4
(AC002403) Human Chromosome 11p15.5 pac pDJ608b4, complete s... 44 1.0 3
(AC124055) Homo sapiens chromosome 11, clone RP4-608B4, comp... 44 1.0 3
(BH555817) BOGHE21TR BOGH Brassica oleracea genomic clone BO... 32 1.0 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 34 1.2 10
(AG448585) Mus musculus molossinus DNA, clone:MSMg01-332J13.... 42 1.2 2
(AJ857536) Brassica rapa subsp. pekinensis GSS, clone KBrH05... 40 1.3 2
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet... 36 1.4 13
(CU062501) Zebrafish DNA sequence from clone CH73-204M7 in l... 46 1.5 1
(AC120933) Rattus norvegicus clone CH230-334A5, *** SEQUENCI... 46 1.5 1
(AC118329) Rattus norvegicus clone CH230-311E1, *** SEQUENCI... 46 1.5 1
(AC113782) Rattus norvegicus clone CH230-97B16, *** SEQUENCI... 46 1.5 1
(AC109545) Rattus norvegicus clone CH230-227G19, *** SEQUENC... 46 1.5 1
(AC095123) Rattus norvegicus clone CH230-8A15, WORKING DRAFT... 46 1.5 1
(EJ484204) 1095403488374 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.5 1
(DH591675) Rattus norvegicus DNA, BAC clone: RNB1-114E17, 3'... 46 1.5 1
(DH589598) Rattus norvegicus DNA, BAC clone: RNB1-111I04, 3'... 46 1.5 1
(BX242225) Danio rerio genomic clone DKEY-244D14, genomic su... 46 1.5 1
(CP000915) Francisella tularensis subsp. mediasiatica FSC147... 46 1.5 1
(CP000803) Francisella tularensis subsp. holarctica FTNF002-... 46 1.5 1
(CP000608) Francisella tularensis subsp. tularensis WY96-341... 46 1.5 1
(CP000439) Francisella tularensis subsp. novicida U112, comp... 46 1.5 1
(CP000437) Francisella tularensis subsp. holarctica OSU18, c... 46 1.5 1
(AM286280) Francisella tularensis subsp. tularensis strain F... 46 1.5 1
(AM233362) Francisella tularensis subsp. holarctica LVS comp... 46 1.5 1
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 46 1.5 1
(EL502188) B03_PFLAB1-LARGE-PLATE11B.AB1 Blood stage Plasmod... 42 1.7 2
(EJ530736) 1092955223212 Global-Ocean-Sampling_GS-29-01-01-1... 28 1.9 4
(ER625749) 1093017609562 Global-Ocean-Sampling_GS-36-01-01-2... 28 1.9 4
(AU270658) Dictyostelium discoideum vegetative cDNA clone:VS... 38 1.9 2
(FC811961) Sr_pASP6_09e10_SP6 S. ratti mixed stage pAMP Stro... 42 1.9 2
(AM432319) Vitis vinifera contig VV78X154707.2, whole genome... 34 2.0 3
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 34 2.1 16
(AC079906) Homo sapiens 12q BAC RP11-618L22 (Roswell Park Ca... 42 2.1 4
(DC381570) Homo sapiens cDNA, clone PLACE7004130, 5' end, mR... 36 2.1 2
(AU270659) Dictyostelium discoideum vegetative cDNA clone:VS... 38 2.1 2
(AC164892) Bos taurus clone CH240-163P16, WORKING DRAFT SEQU... 38 2.1 3
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 2.1 7
(DY891062) CeleSEQ7583 Cunninghamella elegans pBluescript (E... 34 2.2 3
(AF248865) Mycoplasma agalactiae conserved hypothetical prot... 38 2.2 2
(AY195887) Mycoplasma agalactiae strain variant 627#3 Mar (m... 38 2.2 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 32 2.3 13
(AY168953) Mycoplasma fermentans strain PG18 LicA (licA), an... 36 2.5 4
(AC210180) Pan troglodytes chromosome 7 clone CH251-93K5, WO... 38 2.7 5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 32 2.8 13
(AC160489) Bos taurus clone CH240-92K19, WORKING DRAFT SEQUE... 40 2.8 3
(AC223534) Bos taurus clone CH240-467E17, WORKING DRAFT SEQU... 32 2.9 2
(BD142887) Method of simple and quick determination of base ... 34 3.1 3
(AX399615) Sequence 19 from Patent EP1191108. 34 3.1 3
(AR634817) Sequence 19 from patent US 6852489. 34 3.1 3
(BD142885) Method of simple and quick determination of base ... 34 3.1 3
(AX399613) Sequence 17 from Patent EP1191108. 34 3.1 3
(AR634815) Sequence 17 from patent US 6852489. 34 3.1 3
(CQ719383) Sequence 5317 from Patent WO02068579. 36 3.1 2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 3.3 9
(BF272231) GA__Eb0014E20f Gossypium arboreum 7-10 dpa fiber ... 36 3.4 2
>(AU074697) Dictyostelium discoideum slug cDNA, clone SSL573.
Length = 240
Score = 172 bits (87), Expect(2) = 9e-64
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 gcaaaagaatgtagtgatattataaaagaaacaataccatatgcagaactttggatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaaagaatgtagtgatattataaaagaaacaataccatatgcagaactttggatgggt 60
Query: 61 gatcatgttagtgcgccatcaaaagtt 87
|||||||||||||||||||||||||||
Sbjct: 61 gatcatgttagtgcgccatcaaaagtt 87
Score = 107 bits (54), Expect(2) = 9e-64
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 187 attagaggtgaaattgttgaaaaaagatttggtaatgattttccatttttattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 attagaggtgaaattgttgaaaaaagatttggtaatgattttccatttttattt 240
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 776,592,612
Number of extensions: 52950758
Number of successful extensions: 4774026
Number of sequences better than 10.0: 328
Length of query: 620
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 597
Effective length of database: 93,106,754,628
Effective search space: 55584732512916
Effective search space used: 55584732512916
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.20 |
| Homology vs Protein |
Query= Contig-U05787-1 (Contig-U05787-1Q) /CSM_Contig/Contig-U05787-1Q.Seq.d
(620 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54PA0) RecName: Full=Probable mannose-6-phosphate isomerase; ... 344 1e-93
CR382128_733(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 129 7e-29
BT076759_1(BT076759|pid:none) Caligus rogercresseyi clone crog-e... 124 2e-27
AC021640_20(AC021640|pid:none) Arabidopsis thaliana chromosome I... 123 5e-27
AY812397_1(AY812397|pid:none) Schistosoma japonicum SJCHGC09301 ... 122 8e-27
AM425582_2(AM425582|pid:none) Vitis vinifera contig VV78X264454.... 120 4e-26
EU220022_1(EU220022|pid:none) Mytilus edulis isolate BHI14 manno... 120 4e-26
EU220020_1(EU220020|pid:none) Mytilus edulis isolate MES14 manno... 120 4e-26
EU220023_1(EU220023|pid:none) Mytilus edulis isolate DES28 manno... 119 5e-26
EF570417_1(EF570417|pid:none) Mytilus edulis mannose-6-phosphate... 119 5e-26
EU220021_1(EU220021|pid:none) Mytilus edulis isolate DAS20 manno... 119 9e-26
EU220019_1(EU220019|pid:none) Mytilus edulis isolate MES12 manno... 118 1e-25
EF570419_1(EF570419|pid:none) Mytilus trossulus mannose-6-phosph... 117 2e-25
(Q870Y1) RecName: Full=Mannose-6-phosphate isomerase; E... 115 1e-24
(P29951) RecName: Full=Mannose-6-phosphate isomerase; E... 114 2e-24
(Q66WM4) RecName: Full=Mannose-6-phosphate isomerase; E... 113 4e-24
AF504648_1(AF504648|pid:none) Homo sapiens tissue-type brain man... 113 4e-24
(A5A6K3) RecName: Full=Mannose-6-phosphate isomerase; E... 113 4e-24
AB169810_1(AB169810|pid:none) Macaca fascicularis brain cDNA, cl... 113 5e-24
A63583_1(A63583|pid:none) Sequence 1 from Patent WO9720937. &AY... 113 5e-24
AC007152_12(AC007152|pid:none) Arabidopsis thaliana chromosome I... 113 5e-24
FJ668147_1(FJ668147|pid:none) Daphnia pulex strain BW102 mannose... 112 8e-24
DQ440447_1(DQ440447|pid:none) Aedes aegypti clone AET-6017 manno... 112 1e-23
FJ668114_1(FJ668114|pid:none) Daphnia parvula strain A60 mannose... 112 1e-23
(Q8HXX2) RecName: Full=Mannose-6-phosphate isomerase; E... 111 1e-23
(Q8J093) RecName: Full=Mannose-6-phosphate isomerase; E... 111 2e-23
FJ668151_1(FJ668151|pid:none) Daphnia pulex strain LP8 mannose-p... 110 3e-23
(P34948) RecName: Full=Mannose-6-phosphate isomerase; E... 110 3e-23
CP001330_455(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 110 3e-23
FN392321_1148(FN392321|pid:none) Pichia pastoris GS115 chromosom... 110 4e-23
AB173541_1(AB173541|pid:none) Macaca fascicularis brain cDNA clo... 110 4e-23
(Q76IQ2) RecName: Full=Mannose-6-phosphate isomerase; E... 110 4e-23
CU928176_406(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 109 7e-23
EF570416_1(EF570416|pid:none) Mytilus edulis mannose-6-phosphate... 109 7e-23
(Q924M7) RecName: Full=Mannose-6-phosphate isomerase; E... 108 9e-23
FM992689_873(FM992689|pid:none) Candida dubliniensis CD36 chromo... 108 1e-22
EU220014_1(EU220014|pid:none) Mytilus edulis isolate MES14 manno... 108 2e-22
BC106453_1(BC106453|pid:none) Xenopus laevis hypothetical protei... 108 2e-22
EU327894_1(EU327894|pid:none) Leishmania braziliensis strain MHO... 107 2e-22
EU220017_1(EU220017|pid:none) Mytilus edulis isolate BHI14 manno... 107 2e-22
EU053116_1(EU053116|pid:none) Leishmania braziliensis strain MHO... 107 2e-22
EU327901_1(EU327901|pid:none) Leishmania sp. strain MHOM/PE/90/B... 107 2e-22
EU327899_1(EU327899|pid:none) Leishmania sp. strain MHOM/PE/86/P... 107 2e-22
EU327902_1(EU327902|pid:none) Leishmania sp. strain MHOM/PE/90/B... 107 2e-22
DQ288170_1(DQ288170|pid:none) Leishmania peruviana strain MHOM/P... 107 2e-22
AM494969_175(AM494969|pid:none) Leishmania braziliensis chromoso... 107 2e-22
BC103483_1(BC103483|pid:none) Danio rerio zgc:110773, mRNA (cDNA... 107 3e-22
CR382134_399(CR382134|pid:none) Debaryomyces hansenii strain CBS... 107 3e-22
EU973111_1(EU973111|pid:none) Zea mays clone 393466 mannose-6-ph... 107 3e-22
EU053122_1(EU053122|pid:none) Leishmania lainsoni strain MHOM/PE... 106 5e-22
M85238_1(M85238|pid:none) Saccharomyces cerevisiae phosphomannos... 106 6e-22
EF570418_1(EF570418|pid:none) Mytilus trossulus mannose-6-phosph... 105 8e-22
EU220015_1(EU220015|pid:none) Mytilus edulis isolate DAS20 manno... 105 8e-22
AJ300464_1(AJ300464|pid:none) Leishmania mexicana pmi gene for p... 105 1e-21
EU053123_1(EU053123|pid:none) Leishmania amazonensis strain MHOM... 105 1e-21
BT039023_1(BT039023|pid:none) Zea mays full-length cDNA clone ZM... 105 1e-21
DQ449766_1(DQ449766|pid:none) Leishmania infantum strain MHOM/IT... 104 2e-21
AF291701_1(AF291701|pid:none) Filobasidiella neoformans var. neo... 104 2e-21
CR382124_578(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 103 3e-21
CT005269_164(CT005269|pid:none) Leishmania major strain Friedlin... 103 5e-21
DQ449759_1(DQ449759|pid:none) Leishmania infantum strain MHOM/SD... 102 1e-20
(Q75AB5) RecName: Full=Mannose-6-phosphate isomerase; E... 99 1e-19
AK301370_1(AK301370|pid:none) Homo sapiens cDNA FLJ59446 complet... 99 1e-19
CP000859_2009(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 95 2e-18
FJ668073_1(FJ668073|pid:none) Daphnia magna strain CZ1 mannose-p... 94 3e-18
FJ668072_1(FJ668072|pid:none) Daphnia magna strain CA1 mannose-p... 94 3e-18
FJ668076_1(FJ668076|pid:none) Daphnia magna strain HU1 mannose-p... 94 3e-18
FJ668071_1(FJ668071|pid:none) Daphnia magna strain BE1 mannose-p... 94 3e-18
AF016430_10(AF016430|pid:none) Caenorhabditis elegans cosmid C05... 92 9e-18
AP007157_638(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 92 2e-17
FJ668070_1(FJ668070|pid:none) Daphnia magna strain FI2 mannose-p... 91 2e-17
CR522870_2458(CR522870|pid:none) Desulfotalea psychrophila LSv54... 91 2e-17
AE014297_1053(AE014297|pid:none) Drosophila melanogaster chromos... 89 1e-16
AY232213_1(AY232213|pid:none) Drosophila yakuba clone yak-ad_CG8... 89 1e-16
CU928158_1358(CU928158|pid:none) Escherichia fergusonii ATCC 354... 87 5e-16
FM180568_1698(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 87 5e-16
EU900672_1(EU900672|pid:none) Escherichia coli strain 87-14 mann... 86 6e-16
CP000800_1733(CP000800|pid:none) Escherichia coli E24377A, compl... 86 8e-16
CU928164_1438(CU928164|pid:none) Escherichia coli IAI39 chromoso... 85 2e-15
CP000822_1577(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 85 2e-15
EU900670_1(EU900670|pid:none) Escherichia coli strain 493/89 man... 85 2e-15
CP000970_1524(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 85 2e-15
CU928145_1742(CU928145|pid:none) Escherichia coli 55989 chromoso... 84 2e-15
CP000036_1407(CP000036|pid:none) Shigella boydii Sb227, complete... 84 2e-15
CP000243_1769(CP000243|pid:none) Escherichia coli UTI89, complet... 84 2e-15
AP009240_1734(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 84 3e-15
AE014075_1943(AE014075|pid:none) Escherichia coli CFT073, comple... 84 4e-15
CU651637_1540(CU651637|pid:none) Escherichia coli LF82 chromosom... 84 4e-15
CP000886_1801(CP000886|pid:none) Salmonella enterica subsp. ente... 82 9e-15
CP001113_1486(CP001113|pid:none) Salmonella enterica subsp. ente... 82 9e-15
CP001120_1534(CP001120|pid:none) Salmonella enterica subsp. ente... 82 9e-15
AM933172_1572(AM933172|pid:none) Salmonella enterica subsp. ente... 82 9e-15
AE017042_1992(AE017042|pid:none) Yersinia pestis biovar Microtus... 82 1e-14
CP000582_27(CP000582|pid:none) Ostreococcus lucimarinus CCE9901 ... 82 1e-14
CP000720_1845(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 82 1e-14
AE009952_2072(AE009952|pid:none) Yersinia pestis KIM, complete g... 82 1e-14
JQ1192(JQ1192;S18748) mannose-6-phosphate isomerase (EC 5.3.1.8)... 82 1e-14
BX936398_2183(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 82 1e-14
(P25081) RecName: Full=Mannose-6-phosphate isomerase; E... 82 1e-14
AE017220_1484(AE017220|pid:none) Salmonella enterica subsp. ente... 82 2e-14
CP000569_1371(CP000569|pid:none) Actinobacillus pleuropneumoniae... 82 2e-14
CP000790_458(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 81 2e-14
CP000026_1291(CP000026|pid:none) Salmonella enterica subsp. ente... 81 2e-14
BX950851_2242(BX950851|pid:none) Erwinia carotovora subsp. atros... 80 5e-14
CP001048_2218(CP001048|pid:none) Yersinia pseudotuberculosis PB1... 79 8e-14
CP000647_1485(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 79 8e-14
AB353134_47(AB353134|pid:none) Vibrio parahaemolyticus DNA, O an... 78 2e-13
CP001321_1542(CP001321|pid:none) Haemophilus parasuis SH0165, co... 77 3e-13
CP001485_1513(CP001485|pid:none) Vibrio cholerae MJ-1236 chromos... 77 5e-13
CP000481_2094(CP000481|pid:none) Acidothermus cellulolyticus 11B... 76 9e-13
AE016796_1255(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos... 75 1e-12
AP008232_1461(AP008232|pid:none) Sodalis glossinidius str. 'mors... 75 1e-12
AP008215_534(AP008215|pid:none) Oryza sativa (japonica cultivar-... 75 2e-12
S40936(S40936)hypothetical protein ZK632.4 - Caenorhabditis eleg... 75 2e-12
CU466930_1501(CU466930|pid:none) Candidatus Cloacamonas acidamin... 73 7e-12
AE017143_646(AE017143|pid:none) Haemophilus ducreyi strain 35000... 72 1e-11
AM286415_3934(AM286415|pid:none) Yersinia enterocolitica subsp. ... 72 1e-11
CP000644_2731(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 72 1e-11
CP000656_4696(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 72 1e-11
AE017350_170(AE017350|pid:none) Cryptococcus neoformans var. neo... 72 2e-11
CP001600_1993(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 72 2e-11
CP000910_2987(CP000910|pid:none) Renibacterium salmoninarum ATCC... 71 2e-11
FM178379_1613(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 71 3e-11
AL939114_244(AL939114|pid:none) Streptomyces coelicolor A3(2) co... 71 3e-11
AE004439_829(AE004439|pid:none) Pasteurella multocida subsp. mul... 70 4e-11
AX065227_1(AX065227|pid:none) Sequence 353 from Patent WO0100844... 70 4e-11
AP009044_868(AP009044|pid:none) Corynebacterium glutamicum R DNA... 70 4e-11
AE016827_614(AE016827|pid:none) Mannheimia succiniciproducens MB... 70 4e-11
CP000746_920(CP000746|pid:none) Actinobacillus succinogenes 130Z... 70 5e-11
BA000038_1390(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 70 5e-11
BA000035_764(BA000035|pid:none) Corynebacterium efficiens YS-314... 68 2e-10
CP001601_668(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 68 2e-10
AF527174_1(AF527174|pid:none) Mycobacterium smegmatis mc2155 pho... 67 3e-10
CP000511_1711(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 67 3e-10
CR954202_577(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 67 4e-10
EU834702_13(EU834702|pid:none) Streptomyces nodosus GDP-mannose ... 66 7e-10
CP000395_413(CP000395|pid:none) Borrelia afzelii PKo, complete g... 66 7e-10
CP000947_933(CP000947|pid:none) Haemophilus somnus 2336, complet... 66 9e-10
FM178380_895(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 65 1e-09
CP001341_1245(CP001341|pid:none) Arthrobacter chlorophenolicus A... 64 3e-09
AY529119_1(AY529119|pid:none) Plutella xylostella mannose-6-phos... 64 3e-09
CP000454_1179(CP000454|pid:none) Arthrobacter sp. FB24, complete... 64 3e-09
AM849034_640(AM849034|pid:none) Clavibacter michiganensis subsp.... 64 3e-09
CP000013_400(CP000013|pid:none) Borrelia garinii PBi, complete g... 64 3e-09
CP000854_1274(CP000854|pid:none) Mycobacterium marinum M, comple... 64 3e-09
CP001620_1442(CP001620|pid:none) Corynebacterium kroppenstedtii ... 64 4e-09
A70594(A70594) probable manA protein - Mycobacterium tuberculosi... 63 8e-09
CP001616_2465(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 62 1e-08
CP000431_5380(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 62 1e-08
CP000048_389(CP000048|pid:none) Borrelia hermsii DAH, complete g... 60 6e-08
CP000976_391(CP000976|pid:none) Borrelia duttonii Ly, complete g... 60 6e-08
CP000474_1253(CP000474|pid:none) Arthrobacter aurescens TC1, com... 58 2e-07
CU458896_3573(CU458896|pid:none) Mycobacterium abscessus chromos... 58 2e-07
AE016822_389(AE016822|pid:none) Leifsonia xyli subsp. xyli str. ... 58 2e-07
AM420293_6271(AM420293|pid:none) Saccharopolyspora erythraea NRR... 57 3e-07
CP000750_3841(CP000750|pid:none) Kineococcus radiotolerans SRS30... 57 4e-07
CP000820_5738(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 54 5e-06
CP001618_1166(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 53 6e-06
AP009152_330(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 52 1e-05
AX886437_1(AX886437|pid:none) Sequence 2300 from Patent EP1033401. 52 1e-05
AE016796_484(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 49 9e-05
CT573213_1228(CT573213|pid:none) Frankia alni str. ACN14A chromo... 49 1e-04
CP000249_737(CP000249|pid:none) Frankia sp. CcI3, complete genome. 47 3e-04
BX251410_121(BX251410|pid:none) Tropheryma whipplei TW08/27, com... 45 0.001
CU207366_1672(CU207366|pid:none) Gramella forsetii KT0803 comple... 44 0.004
CP000140_1677(CP000140|pid:none) Parabacteroides distasonis ATCC... 43 0.006
EU220327_1(EU220327|pid:none) Rhogeessa tumida voucher TK20516 m... 41 0.031
EU220335_1(EU220335|pid:none) Rhogeessa io voucher TK15164 manos... 41 0.031
EU220301_1(EU220301|pid:none) Rhogeessa aeneus voucher TK20704 m... 41 0.031
CS560082_1(CS560082|pid:none) Sequence 669 from Patent WO2006032... 41 0.031
EU220384_1(EU220384|pid:none) Rhogeessa tumida voucher AK25022 m... 41 0.031
EU220319_1(EU220319|pid:none) Rhogeessa aeneus voucher FN30463 m... 41 0.031
EU220317_1(EU220317|pid:none) Rhogeessa aeneus voucher FN30462 m... 41 0.031
CP000875_881(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 40 0.040
EU220298_1(EU220298|pid:none) Myotis yumanensis voucher TK48587 ... 40 0.040
EU220328_1(EU220328|pid:none) Rhogeessa tumida voucher TK27068 m... 40 0.040
EU220348_1(EU220348|pid:none) Rhogeessa tumida voucher TK40360 m... 40 0.040
AM398681_1736(AM398681|pid:none) Flavobacterium psychrophilum JI... 40 0.040
EU220392_1(EU220392|pid:none) Rhogeessa gracilis voucher AK11059... 40 0.040
EU220391_1(EU220391|pid:none) Rhogeessa mira voucher TK45014 man... 40 0.040
AP006841_1655(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 40 0.053
CP000383_462(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 38 0.26
EU220363_1(EU220363|pid:none) Rhogeessa tumida voucher TK40186 m... 37 0.34
CP001276_483(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 35 2.2
CP000716_1498(CP000716|pid:none) Thermosipho melanesiensis BI429... 34 3.8
CP000812_675(CP000812|pid:none) Thermotoga lettingae TMO, comple... 34 3.8
AE015929_2229(AE015929|pid:none) Staphylococcus epidermidis ATCC... 34 3.8
CP000879_444(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 33 4.9
CR954253_54(CR954253|pid:none) Lactobacillus delbrueckii subsp. ... 33 6.4
CP000412_42(CP000412|pid:none) Lactobacillus delbrueckii subsp. ... 33 6.4
CP000771_861(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 33 8.4
AD1709(AD1709) mannnose-6 phospate isomerase homolog lin2215 [im... 33 8.4
FM242711_2100(FM242711|pid:none) Listeria monocytogenes Clip8145... 33 8.4
AM295250_2427(AM295250|pid:none) Staphylococcus carnosus subsp. ... 33 8.4
CP000916_1848(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 33 8.4
AF1338(AF1338) mannnose-6 phospate isomerase homolog lmo2110 [im... 33 8.4
>(Q54PA0) RecName: Full=Probable mannose-6-phosphate isomerase;
EC=5.3.1.8; AltName: Full=Phosphomannose isomerase;
Short=PMI; AltName: Full=Phosphohexomutase;
Length = 452
Score = 344 bits (882), Expect = 1e-93
Identities = 173/183 (94%), Positives = 173/183 (94%)
Frame = +1
Query: 1 AKECSDIIKETIPYAELWMGDHVSAPSKVEYKNKELKLREYIDTVQKEINEKXXXXXXXX 180
AKECSDIIKETIPYAELWMGDHVSAPSKVEYKNKELKLREYIDTVQKEINEK
Sbjct: 50 AKECSDIIKETIPYAELWMGDHVSAPSKVEYKNKELKLREYIDTVQKEINEKSSTSSSSS 109
Query: 181 XXIRGEIVEKRFGNDFPFLFKVLSIRTALSIQAHPDSQLAQVLFKKYPNIYKDPYHKPEI 360
IRGEIVEKRFGNDFPFLFKVLSIRTALSIQAHPDSQLAQVLFKKYPNIYKDPYHKPEI
Sbjct: 110 SSIRGEIVEKRFGNDFPFLFKVLSIRTALSIQAHPDSQLAQVLFKKYPNIYKDPYHKPEI 169
Query: 361 AIATTPFEALCSFRPLSEIQSFIDTIPEFKNSLPNNLIKLDDCKEYLKSIVTSLLKADGL 540
AIATTPFEALCSFRPLSEIQSFIDTIPEFKNSLPNNLIKLDDCKEYLKSIVTSLLKADGL
Sbjct: 170 AIATTPFEALCSFRPLSEIQSFIDTIPEFKNSLPNNLIKLDDCKEYLKSIVTSLLKADGL 229
Query: 541 LIS 549
LIS
Sbjct: 230 LIS 232
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 781,060,889
Number of extensions: 13298825
Number of successful extensions: 36170
Number of sequences better than 10.0: 196
Number of HSP's gapped: 35933
Number of HSP's successfully gapped: 206
Length of query: 206
Length of database: 1,040,966,779
Length adjustment: 123
Effective length of query: 83
Effective length of database: 646,839,724
Effective search space: 53687697092
Effective search space used: 53687697092
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |