Contig-U01337-1
Contig ID Contig-U01337-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01337-1 (Contig-U01337-1Q) /CSM_Contig/Contig-U01337-1Q.Seq.d
AAACTCTTTAGTGTCTGAAGTTAATAATAATAATACCACTACCATCACTA
ATACCACCTCTGACAATATCACAACGACATCAATAGCAGTCTCCACACCA
ATGGATGGAATAGAGTCTAAAGATTTAAATATCACCGCAACAATAGCTGA
AAACGAAATCTCAACAGCAACAACCACATTAATAAATACTGAAGAAGCAG
AAGCAACAACCACCACATTCACAAATACAGAGGAAACAACTACTACTACA
ACAACAAAAGAAATAGATCAAATACCTATTAATGGAGAGGTGATAAATGG
TAATGAAATTCCGGGAGATAATGTTGCTCAACAAATGAAAGTTGATAGTG
ATAACACCAATGAAACTAATCAAAAAGAAAATAATCAAAATGATAATAAT
AGTCAAAGTATAAATCCAACAACCAGCAATCAAACTAATAAAATTACAAA
TGACAATGTTAATAATAGCGAAACAGATCAAATTTTAAATTTTATACAGG
ATAA----------TAATAATAATAATAATAATAGTAATAGCGAAAATAA
TAATGATAACAATAATGATAATAACAATCAAGGTTTAAATAGTTTAATGA
AAAATGAAAAAGGAATTGTAAATAATAATAATGATAGTAATAATATTGAT
AATACAACAAATACAAGTAACCAACCTACACTATCCAATCAAGATGATTA
TAATAATAATAATAATAATACGATCATTCCTCAAAGTTTAAATCCCACGA
ATAATACTGAGGTTATTTAATAATGACTCTCATAAATATAATAATTCTTA
AATAAAAAAAAATT

Gap gap included
Contig length 804
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 293783
End point 292978
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 4
Link to clone list U01337
List of clone(s)

est1=SLG390F,1,505
est2=SLJ336F,1,193
est3=SLJ336Z,506,806
est4=SLG390Z,553,806
Translated Amino Acid sequence
NSLVSEVNNNNTTTITNTTSDNITTTSIAVSTPMDGIESKDLNITATIAENEISTATTTL
INTEEAEATTTTFTNTEETTTTTTTKEIDQIPINGEVINGNEIPGDNVAQQMKVDSDNTN
ETNQKENNQNDNNSQSINPTTSNQTNKITNDNVNNSETDQILNFIQD---

---NNNNNNSNSENNNDNNNDNNNQGLNSLMKNEKGIVNNNNDSNNIDNTTNTSNQPTLS
NQDDYNNNNNNTIIPQSLNPTNNTEVI***ls*i**flnkkk


Translated Amino Acid sequence (All Frames)
Frame A:
klfsv*s****yhyhh*yhl*qyhndinsslhtngwnrv*rfkyhrnns*krnlnsnnhi
nky*rsrsnnhhihkyrgnnyyynnkrnrsnty*wrgdkw**nsgr*ccstnes****hq
*n*skrk*sk****skyksnnqqsn**nyk*qc***rnrsnfkfytg*---

---*********rk****q****qsrfk*fnek*krnck*******y**ynkyk*ptyti
qsr*l******ydhsskfkshe*y*gylimtliniiilk*kki

Frame B:
NSLVSEVNNNNTTTITNTTSDNITTTSIAVSTPMDGIESKDLNITATIAENEISTATTTL
INTEEAEATTTTFTNTEETTTTTTTKEIDQIPINGEVINGNEIPGDNVAQQMKVDSDNTN
ETNQKENNQNDNNSQSINPTTSNQTNKITNDNVNNSETDQILNFIQD---

---NNNNNNSNSENNNDNNNDNNNQGLNSLMKNEKGIVNNNNDSNNIDNTTNTSNQPTLS
NQDDYNNNNNNTIIPQSLNPTNNTEVI***ls*i**flnkkk

Frame C:
tl*clkliiiiplpslippltisqrhq*qsphqwme*slki*ispqq*lktksqqqqph*
*ilkkqkqqpphsqiqrkqlllqqqkk*ikyllmer**mvmkfreimllnk*klivitpm
klikkkiikmiiivkv*iqqpaikliklqmtmliiakqikf*ilyri---

---iiiiiiviakiimitimiitikv*iv**kmkkel*iiimiviiliiqqiqvtnlhyp
ikmiiiiiiiirsflkv*ipriilrlfnndshkynns*ikkn

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01337-1 (Contig-U01337-1Q)
/CSM_Contig/Contig-U01337-1Q.Seq.d
(814 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01337-1 (Contig-U01337-1Q) /CSM_Contig/Conti... 999 0.0
Contig-U11798-1 (Contig-U11798-1Q) /CSM_Contig/Conti... 46 8e-05
Contig-U14228-1 (Contig-U14228-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U08537-1 (Contig-U08537-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11995-1 (Contig-U11995-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11767-1 (Contig-U11767-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11144-1 (Contig-U11144-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U01624-1 (Contig-U01624-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U01555-1 (Contig-U01555-1Q) /CSM_Contig/Conti... 40 0.005

>Contig-U01337-1 (Contig-U01337-1Q) /CSM_Contig/Contig-U01337-1Q.Seq.d
Length = 814

Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus


Query: 1 aaactctttagtgtctgaagttaataataataataccactaccatcactaataccacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaactctttagtgtctgaagttaataataataataccactaccatcactaataccacctc 60


Query: 61 tgacaatatcacaacgacatcaatagcagtctccacaccaatggatggaatagagtctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacaatatcacaacgacatcaatagcagtctccacaccaatggatggaatagagtctaa 120


Query: 121 agatttaaatatcaccgcaacaatagctgaaaacgaaatctcaacagcaacaaccacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatttaaatatcaccgcaacaatagctgaaaacgaaatctcaacagcaacaaccacatt 180


Query: 181 aataaatactgaagaagcagaagcaacaaccaccacattcacaaatacagaggaaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaatactgaagaagcagaagcaacaaccaccacattcacaaatacagaggaaacaac 240


Query: 241 tactactacaacaacaaaagaaatagatcaaatacctattaatggagaggtgataaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactactacaacaacaaaagaaatagatcaaatacctattaatggagaggtgataaatgg 300


Query: 301 taatgaaattccgggagataatgttgctcaacaaatgaaagttgatagtgataacaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatgaaattccgggagataatgttgctcaacaaatgaaagttgatagtgataacaccaa 360


Query: 361 tgaaactaatcaaaaagaaaataatcaaaatgataataatagtcaaagtataaatccaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaaactaatcaaaaagaaaataatcaaaatgataataatagtcaaagtataaatccaac 420


Query: 421 aaccagcaatcaaactaataaaattacaaatgacaatgttaataatagcgaaacagatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaccagcaatcaaactaataaaattacaaatgacaatgttaataatagcgaaacagatca 480


Query: 481 aattttaaattttatacaggataa 504
||||||||||||||||||||||||
Sbjct: 481 aattttaaattttatacaggataa 504


Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus


Query: 721 cgatcattcctcaaagtttaaatcccacgaataatactgaggttatttaataatgactct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgatcattcctcaaagtttaaatcccacgaataatactgaggttatttaataatgactct 780


Query: 781 cataaatataataattcttaaat 803
|||||||||||||||||||||||
Sbjct: 781 cataaatataataattcttaaat 803


Score = 89.7 bits (45), Expect = 6e-18
Identities = 45/45 (100%)
Strand = Plus / Plus


Query: 655 caacaaatacaagtaaccaacctacactatccaatcaagatgatt 699
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 caacaaatacaagtaaccaacctacactatccaatcaagatgatt 699


Score = 75.8 bits (38), Expect = 9e-14
Identities = 38/38 (100%)
Strand = Plus / Plus


Query: 575 caatcaaggtttaaatagtttaatgaaaaatgaaaaag 612
||||||||||||||||||||||||||||||||||||||
Sbjct: 575 caatcaaggtttaaatagtttaatgaaaaatgaaaaag 612


Score = 30.2 bits (15), Expect = 4.9
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 22 taataataataatac 36
|||||||||||||||
Sbjct: 707 taataataataatac 721


>Contig-U11798-1 (Contig-U11798-1Q) /CSM_Contig/Contig-U11798-1Q.Seq.d
Length = 2226

Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 235 aacaactactactacaacaacaa 257
|||||||||||||||||||||||
Sbjct: 529 aacaactactactacaacaacaa 551


Score = 30.2 bits (15), Expect = 4.9
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 22 taataataataataccact 40
|||||||||||||| ||||
Sbjct: 656 taataataataataacact 674


Score = 30.2 bits (15), Expect = 4.9
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 235 aacaactactactacaacaacaa 257
|||||| || |||||||||||||
Sbjct: 496 aacaacaacaactacaacaacaa 518


Score = 30.2 bits (15), Expect = 4.9
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 22 taataataataatac 36
|||||||||||||||
Sbjct: 1864 taataataataatac 1878


>Contig-U14228-1 (Contig-U14228-1Q) /CSM_Contig/Contig-U14228-1Q.Seq.d
Length = 622

Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 21 ttaataataataataccactac 42
||||||||||||||||||||||
Sbjct: 292 ttaataataataataccactac 313


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 38,656
Number of Sequences: 8361
Number of extensions: 38656
Number of successful extensions: 14851
Number of sequences better than 10.0: 841
length of query: 814
length of database: 7,895,291
effective HSP length: 16
effective length of query: 798
effective length of database: 7,761,515
effective search space: 6193688970
effective search space used: 6193688970
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.26
Homology vs DNA
Query= Contig-U01337-1 (Contig-U01337-1Q) /CSM_Contig/Contig-U01337-1Q.Seq.d
(814 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061864) Dictyostelium discoideum slug cDNA, clone SLG390. 999 0.0 1
(AU060345) Dictyostelium discoideum slug cDNA, clone SLJ336. 383 e-102 1
(AU039776) Dictyostelium discoideum slug cDNA, clone SLG390. 165 1e-51 2
(AU053654) Dictyostelium discoideum slug cDNA, clone SLJ336. 151 1e-47 3
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 42 3e-07 6
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 36 8e-04 7
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 40 0.001 5
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 0.001 5
(DL005655) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES. 32 0.005 3
(CS459580) Sequence 61 from Patent WO2006117596. 32 0.005 3
(AP006345) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 32 0.005 3
(AC097722) Homo sapiens chromosome UNK clone RP11-186D19, WO... 32 0.005 3
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.006 8
(AL512639) Human DNA sequence from clone RP11-346G21 on chro... 54 0.009 1
(AC026253) Homo sapiens chromosome 2 clone RP11-721G21 map 2... 54 0.009 1
(EY344090) CAWZ12883.rev CAWZ Helobdella robusta Primary Lat... 38 0.010 3
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 38 0.012 4
(BF937189) fm61h07.y1 Zebrafish adult retina cDNA Danio reri... 32 0.019 4
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.031 6
(AC108352) Rattus norvegicus clone CH230-205F7, *** SEQUENCI... 46 0.032 4
(GC699666) Sequence 14911 from patent US 6812339. 52 0.034 1
(AL357037) Human DNA sequence from clone RP11-383B24 on chro... 52 0.034 1
(AC172696) Bos taurus clone CH240-228B19, WORKING DRAFT SEQU... 52 0.034 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 36 0.041 6
(AM628892) Entamoeba dispar GSS, clone dispar31a11.q1k. 36 0.044 3
(AC128757) Rattus norvegicus clone CH230-191L3, *** SEQUENCI... 44 0.044 6
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.057 5
(AL844509) Plasmodium falciparum chromosome 13. 40 0.065 10
(AC180655) Strongylocentrotus purpuratus clone R3-3019L21, W... 40 0.065 3
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 40 0.083 3
(CR385043) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.095 4
(AX344552) Sequence 3 from Patent WO0200932. 36 0.095 8
(EU018315) Lophopyrum elongatum alpha-gliadin (gli-A102) pse... 46 0.11 2
(EC817826) SME00006627 esmbsro2 Sawyeria marylandensis cDNA,... 38 0.11 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 40 0.11 4
(BJ419993) Dictyostelium discoideum cDNA clone:ddv37k20, 5' ... 38 0.12 3
(AC187592) Gallus gallus BAC clone CH261-124L19 from chromos... 50 0.13 1
(CS396146) Sequence 5421 from Patent WO2006025879. 50 0.13 1
(CS392504) Sequence 1779 from Patent WO2006025879. 50 0.13 1
(CS216102) Sequence 5421 from Patent WO2005111246. 50 0.13 1
(CS212460) Sequence 1779 from Patent WO2005111246. 50 0.13 1
(AC129613) Rattus norvegicus clone CH230-121A5, WORKING DRAF... 50 0.13 1
(AC123399) Rattus norvegicus clone CH230-300M18, WORKING DRA... 50 0.13 1
(AC098128) Rattus norvegicus clone CH230-134P18, WORKING DRA... 50 0.13 1
(AY458637) Uncultured marine bacterium 440 clone EBAC750-02H... 38 0.14 5
(AY428796) Dictyostelium discoideum DIF insensitive mutant A... 32 0.17 4
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 0.18 5
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 42 0.19 6
(AB183264) Dictyostelium discoideum amvA mRNA for GATA zinc ... 36 0.23 3
(AC180142) Strongylocentrotus purpuratus clone R3-4003M1, WO... 46 0.23 6
(CR385061) Zebrafish DNA sequence from clone BUSM1-20K6. 38 0.24 4
(AC179210) Strongylocentrotus purpuratus clone R3-4019O18, W... 44 0.26 5
(BJ387810) Dictyostelium discoideum cDNA clone:dds5l02, 5' e... 36 0.29 2
(AC181417) Strongylocentrotus purpuratus clone R3-1112E16, W... 38 0.30 2
(AC179503) Strongylocentrotus purpuratus clone R3-1035H11, W... 38 0.30 2
(EY373318) CAXA14493.rev CAXA Helobdella robusta Subtracted ... 46 0.31 2
(DX400193) GH__Sa0034G11.b1 Gossypium herbaceum WGS library ... 30 0.31 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.32 6
(DV184126) CT031_F12_CT031_3700_91.ab1 C. tentans tissue cul... 42 0.32 2
(CT631537) Danio rerio EST, clone ZF_mu_46o13 3'. 32 0.33 3
(C90563) Dictyostelium discoideum slug cDNA, clone SSI728. 36 0.33 3
(AF238313) Dictyostelium discoideum developmental protein DG... 34 0.34 3
(EY386139) CAXA6064.rev CAXA Helobdella robusta Subtracted L... 46 0.35 2
(EY372732) CAXA14166.rev CAXA Helobdella robusta Subtracted ... 46 0.35 2
(CU607001) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.36 5
(EY391905) CAXA9526.rev CAXA Helobdella robusta Subtracted L... 46 0.36 2
(EY390114) CAXA8560.rev CAXA Helobdella robusta Subtracted L... 46 0.36 2
(EY381052) CAXA3226.rev CAXA Helobdella robusta Subtracted L... 46 0.39 2
(EY306870) CAWX20154.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY295016) CAWX12015.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY304742) CAWX17994.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY303273) CAWX16620.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY311389) CAWX23442.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY312071) CAWX23817.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY316115) CAWX26434.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY322209) CAWX8325.fwd CAWX Helobdella robusta Primary Earl... 36 0.39 2
(EY293257) CAWX11026.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY300349) CAWX14972.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY360340) CAWZ7030.fwd CAWZ Helobdella robusta Primary Late... 36 0.39 2
(EY320218) CAWX7278.fwd CAWX Helobdella robusta Primary Earl... 36 0.39 2
(EY293446) CAWX11131.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY292950) CAWX10849.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY311342) CAWX23414.fwd CAWX Helobdella robusta Primary Ear... 36 0.39 2
(EY352109) CAWZ1851.fwd CAWZ Helobdella robusta Primary Late... 36 0.39 2
(AF111943) Dictyostelium discoideum AX4 development protein ... 44 0.40 2
(AB236261) Enchytraeus japonensis cDNA clone:F06B11, express... 38 0.40 2
(AB236276) Enchytraeus japonensis cDNA clone:F07B01, express... 38 0.40 2
(EY294934) CAWX11967.fwd CAWX Helobdella robusta Primary Ear... 36 0.40 2
(DU908822) 362299 Tomato EcoRI BAC Library Solanum lycopersi... 42 0.41 2
(EY345427) CAWZ13902.fwd CAWZ Helobdella robusta Primary Lat... 46 0.42 2
(EY390115) CAXA8560.fwd CAXA Helobdella robusta Subtracted L... 46 0.45 2
(EY361303) CAWZ7653.rev CAWZ Helobdella robusta Primary Late... 38 0.46 3
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 38 0.50 10
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 40 0.51 5
(BX571735) Mouse DNA sequence from clone RP23-114O19 on chro... 48 0.53 1
(AL136328) Mus musculus chromosome X, clone CT7-41M10. 48 0.53 1
(EA203891) Sequence 68206 from patent US 7214786. 48 0.53 1
(EA144366) Sequence 8681 from patent US 7214786. 48 0.53 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 48 0.53 1
(AC091218) Drosophila melanogaster 3L BAC RP98-3E24 (Roswell... 48 0.53 1
(AC010022) Drosophila melanogaster 3L BAC RP98-1E12 (Roswell... 48 0.53 1
(AC128472) Rattus norvegicus clone CH230-45J5, WORKING DRAFT... 48 0.53 1
(FP085593) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.53 1
(AC013967) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.53 1
(FI490512) CH322-93C14.y CHORI-322 Drosophila melanogaster g... 48 0.53 1
(EK407898) 1095505093421 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.53 1
(EK374520) 1095469432658 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.53 1
(EC772110) EST 8606 Guarana fruits cDNA library Paullinia cu... 48 0.53 1
(CN009538) WHE3859_H06_O11ZS Wheat Fusarium graminearum infe... 48 0.53 1
(CJ930629) Triticum aestivum cDNA clone:whchan5p15, 5' end. 48 0.53 1
(CJ897444) Triticum aestivum cDNA clone:whthkles13e05, 5' end. 48 0.53 1
(CJ733000) Triticum aestivum cDNA clone whsh11n09 5', Y.Ogih... 48 0.53 1
(CJ707790) Triticum aestivum cDNA clone whv3n12c11 5', Y.Ogi... 48 0.53 1
(CJ704419) Triticum aestivum cDNA clone whv16n17n12 5', Y.Og... 48 0.53 1
(CJ677830) Triticum aestivum cDNA clone whok10e22 5', Y.Ogih... 48 0.53 1
(CA721670) wdk9n1.pk001.l2 wdk9n1 Triticum aestivum cDNA clo... 48 0.53 1
(CA718308) wdk5c.pk005.p16 wdk5c Triticum aestivum cDNA clon... 48 0.53 1
(CA717291) wdk4c.pk005.b16 wdk4c Triticum aestivum cDNA clon... 48 0.53 1
(BU438803) 604143836F1 CSEQRBN11 Gallus gallus cDNA clone Ch... 48 0.53 1
(BQ806498) WHE3579_G06_M11ZS Wheat developing grains cDNA li... 48 0.53 1
(BQ806082) WHE3574_F03_L06ZS Wheat developing grains cDNA li... 48 0.53 1
(BQ805571) WHE3568_E10_I20ZS Wheat developing grains cDNA li... 48 0.53 1
(BQ804981) WHE3561_D01_H01ZS Wheat developing grains cDNA li... 48 0.53 1
(BJ239750) Triticum aestivum cDNA clone:whe7k03, 3' end, sin... 48 0.53 1
(BJ237220) Triticum aestivum cDNA clone:whe24p05, 5' end, si... 48 0.53 1
(BJ236800) Triticum aestivum cDNA clone:whe23d03, 5' end, si... 48 0.53 1
(BJ235605) Triticum aestivum cDNA clone:whe17h22, 5' end, si... 48 0.53 1
(BJ233881) Triticum aestivum cDNA clone:whe7k03, 5' end, sin... 48 0.53 1
(BJ233052) Triticum aestivum cDNA clone:whe3c06, 5' end, sin... 48 0.53 1
(BJ232418) Triticum aestivum cDNA clone:whe12h12, 5' end, si... 48 0.53 1
(BG263486) WHE2342_E10_I20ZS Wheat pre-anthesis spike cDNA l... 48 0.53 1
(AC129991) Rattus norvegicus clone CH230-101O23, *** SEQUENC... 42 0.56 7
(FG285882) 1108770704083 New World Screwworm Egg 9261 ESTs C... 34 0.57 4
(BH537261) BOHGX70TR BOHG Brassica oleracea genomic clone BO... 36 0.60 3
(CT395948) Sus scrofa genomic clone CH242-483F8, genomic sur... 38 0.62 3
(FM975066) Glossina morsitans morsitans EST, clone GMsg76b07... 34 0.63 3
(AC217677) Populus trichocarpa clone Pop1-97L17, complete se... 36 0.63 5
(AC201014) Strongylocentrotus purpuratus clone R3-12G8, WORK... 42 0.66 2
(AC181785) Strongylocentrotus purpuratus clone R3-1030O21, W... 40 0.68 3
(CU655899) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.71 4
(AF362372) Dictyostelium discoideum histidine kinase DhkJ (d... 44 0.82 2
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 36 0.84 7
(AC159615) Mus musculus BAC clone RP24-484P4 from chromosome... 36 0.90 6
(AM180355) Clostridium difficile 630 complete genome. 36 0.90 2
(AY232267) Dictyostelium discoideum putative protein Roco5 (... 42 0.92 3
(AC103133) Rattus norvegicus clone CH230-216I1, *** SEQUENCI... 44 0.95 5
(FB747867) Sequence 8 from Patent WO2008009478. 34 0.98 5
(AC078839) Oryza sativa Japonica Group chromosome X clone OS... 38 0.99 3
(CR354553) Zebrafish DNA sequence from clone CH211-158N6 in ... 44 1.0 4
(AM637061) Entamoeba dispar GSS, clone dispar42g05.q1k. 30 1.1 4
(AC186365) Gallus gallus BAC clone TAM32-69H4 from chromosom... 40 1.1 4
(BJ399268) Dictyostelium discoideum cDNA clone:dds5l02, 3' e... 36 1.1 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 1.2 5
(AP007215) Homo sapiens genomic DNA, chromosome 11 clone:CMF... 32 1.2 2
(AC178616) Strongylocentrotus purpuratus clone R3-3021F5, WO... 40 1.3 5
(BJ445509) Dictyostelium discoideum cDNA clone:ddv59m18, 3' ... 36 1.3 3
(FK889311) EST_crog_evm_855326 crog_evm Caligus rogercressey... 36 1.3 2
(BJ379390) Dictyostelium discoideum cDNA clone:ddc34p16, 3' ... 36 1.3 2
(DY886038) CeleSEQ1521 Cunninghamella elegans pBluescript (E... 38 1.3 3
(FE772493) CCAG6672.g1 CCAG Petrolisthes cinctipes heart, gi... 40 1.3 2
(BJ346386) Dictyostelium discoideum cDNA clone:dda30b24, 3' ... 36 1.4 2
(FE779118) CCAG10577.g1 CCAG Petrolisthes cinctipes heart, g... 40 1.4 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 1.4 4
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 1.4 6
(AL196412) Tetraodon nigroviridis genome survey sequence T7 ... 34 1.4 2
(BJ927967) Daphnia magna cDNA, clone:IGU001_0028_B05.f, 5' e... 36 1.5 2
(EY313025) CAWX24725.fwd CAWX Helobdella robusta Primary Ear... 44 1.5 2
(AY804182) Cotesia glomerata microsatellite Cot1 sequence. 34 1.5 2
(AC068849) Homo sapiens chromosome 12 clone RP11-301P22 map ... 38 1.6 4
(AU071469) Dictyostelium discoideum slug cDNA, clone SSB601. 40 1.6 2
(DU344088) 1098313085803 CHORI-243 Ovis aries genomic clone ... 38 1.6 2
(AY679519) Dictyostelium discoideum sphingosine kinase B (sg... 30 1.6 4
(EC824800) SME00002652 esmbsro2 Sawyeria marylandensis cDNA,... 36 1.7 3
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 38 1.7 5
(FP236631) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 1.8 3
(AF019985) Dictyostelium discoideum Spalten (spnA) mRNA, com... 38 1.8 3
(AX345673) Sequence 744 from Patent WO0200928. 44 1.9 3
(AY160107) Dictyostelium discoideum nucleotide exchange fact... 34 1.9 4
(Z74473) Caenorhabditis elegans Cosmid F56H9. 42 2.0 3
(U23479) Dictyostelium discoideum phosphatidylinositol 4-kin... 38 2.0 3
(ER457696) 1092963875417 Global-Ocean-Sampling_GS-35-01-01-1... 36 2.0 3
(CU207260) Zebrafish DNA sequence from clone DKEY-190J2 in l... 46 2.1 1
(CT573440) Zebrafish DNA sequence from clone CH211-246E12 in... 46 2.1 1
(CR925728) Zebrafish DNA sequence from clone DKEY-96G2 in li... 46 2.1 1
(BX649457) Zebrafish DNA sequence from clone DKEYP-87E7 in l... 46 2.1 1
(BX537273) Zebrafish DNA sequence from clone CH211-151F2 in ... 46 2.1 1
(BX322566) Zebrafish DNA sequence from clone CH211-209B6 in ... 46 2.1 1
(BX005014) Zebrafish DNA sequence from clone CH211-103E2 in ... 46 2.1 1
(BX000477) Zebrafish DNA sequence from clone CH211-59D8 in l... 46 2.1 1
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 46 2.1 1
(AF025751) HIV-1 isolate SFMHS3.1 from San Francisco, envelo... 46 2.1 1
(AC154740) Mus musculus BAC clone RP23-118I16 from chromosom... 46 2.1 1
(AC139300) Mus musculus BAC clone RP23-258L8 from chromosome... 46 2.1 1
(AC115302) Mus musculus BAC clone RP24-107D24 from chromosom... 46 2.1 1
(DQ657221) Austrobaileya scandens class III HD-Zip protein H... 46 2.1 1
(AL161549) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 2.1 1
(AL021711) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 46 2.1 1
(AX345504) Sequence 575 from Patent WO0200928. 46 2.1 1
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 46 2.1 1
(AJ314911) Dictyostelium discoideum DrnA gene for putative R... 46 2.1 1
(AL133240) Human chromosome 14 DNA sequence BAC R-639F2 of l... 46 2.1 1
(AL121773) Human chromosome 14 DNA sequence BAC R-472N19 of ... 46 2.1 1
(AB038653) Homo sapiens genomic DNA, chromosome 14q32.1, BAC... 46 2.1 1
(AC147696) Otolemur garnettii clone CH256-474F16, WORKING DR... 46 2.1 1
(AC147490) Otolemur garnettii clone CH256-330F10, WORKING DR... 46 2.1 1
(AC142515) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.1 1
(AC141503) Rattus norvegicus clone CH230-83B19, WORKING DRAF... 46 2.1 1
(AC137190) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.1 1
(AC133615) Rattus norvegicus clone CH230-89D4, WORKING DRAFT... 46 2.1 1
(AC132519) Rattus norvegicus clone CH230-104B3, WORKING DRAF... 46 2.1 1
(AC095962) Rattus norvegicus clone CH230-12B3, *** SEQUENCIN... 46 2.1 1
(CU929110) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.1 1
(CU695043) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.1 1
(CU463875) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.1 1
(AC207249) Zea mays chromosome 2 clone CH201-85N22; ZMMBBc00... 46 2.1 1
(AC205534) Zea mays chromosome 4 clone CH201-106O18; ZMMBBc0... 46 2.1 1
(AC204353) Zea mays chromosome 6 clone CH201-57E22; ZMMBBc00... 46 2.1 1
(AC194637) Zea mays chromosome 6 clone ZMMBBb-476H14; ZMMBBb... 46 2.1 1
(AC187288) Zea mays chromosome 6 clone CH201-273K16; ZMMBBc0... 46 2.1 1
(AC184564) Strongylocentrotus purpuratus clone R3-3052G21, W... 46 2.1 1
(AC184549) Strongylocentrotus purpuratus clone R3-28M14, WOR... 46 2.1 1
(AC183928) Zea mays chromosome unknown clone ZMMBBb-506M11; ... 46 2.1 1
(AC180678) Strongylocentrotus purpuratus clone R3-3087O14, W... 46 2.1 1
(AC179657) Strongylocentrotus purpuratus clone R3-1024G02, W... 46 2.1 1
(AC178945) Strongylocentrotus purpuratus clone R3-3121F1, WO... 46 2.1 1
(AC178707) Strongylocentrotus purpuratus clone R3-3006E17, W... 46 2.1 1
(AC175229) Atelerix albiventris clone LB4-96D8, WORKING DRAF... 46 2.1 1
(AC174677) Mus musculus chromosome 9 clone RP23-91P20, WORKI... 46 2.1 1
(AZ946650) 2M0208I05R Mouse 10kb plasmid UUGC2M library Mus ... 46 2.1 1
(ER606750) 1093016282141 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.1 1
(EK265523) 1095462223255 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.1 1
(EJ487467) 1095403513702 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.1 1
(ED803819) MG__Bb0061K08f MG__Bb Mimulus guttatus genomic, g... 46 2.1 1
(CW931970) EDCCA81TR A. castellanii, 6-8 kb library from tot... 46 2.1 1
(CT428402) Sus scrofa genomic clone CH242-418A22, genomic su... 46 2.1 1
(CT109401) Sus scrofa genomic clone CH242-218B2, genomic sur... 46 2.1 1
(AG319225) Mus musculus molossinus DNA, clone:MSMg01-104K18.... 46 2.1 1
(EL460244) CHTS1441.b2_B02.ab1 CHT(LMS) Jerusalem artichoke ... 46 2.1 1
(EG557022) CR02026D10 Leaf CR02 cDNA library Catharanthus ro... 46 2.1 1
(DW693830) EST017311 Trichophyton rubrum cDNA library 3 Tric... 46 2.1 1
(DW680381) EST003862 Trichophyton rubrum cDNA library 0 Tric... 46 2.1 1
(DR918134) EST1109673 Aquilegia cDNA library Aquilegia formo... 46 2.1 1
(DR907334) myx0399 myx cDNA Library Porphyra yezoensis cDNA,... 46 2.1 1
(CK327046) QV0-HT0810-010800-323-b10 HT0810 Homo sapiens cDN... 46 2.1 1
(AJ884038) Trichophyton rubrum EST, clone TrMZA02ACM. 46 2.1 1
(C93684) Dictyostelium discoideum slug cDNA, clone SSL603. 46 2.1 1
(BM167945) EST570468 PyBS Plasmodium yoelii yoelii cDNA clon... 46 2.1 1
(BJ366856) Dictyostelium discoideum cDNA clone:ddc40b13, 5' ... 46 2.1 1
(BB971715) Plasmodium berghei str. ANKA cDNA clone: OK001396... 46 2.1 1
(FC695850) CAXX5205.fwd CAXX Lottia gigantea from male gonad... 46 2.1 1
(EX635492) 256602233 Pea aphid whole body normalized full le... 46 2.1 1
(ES594230) 000001602952_A14.ab1 Eucalyptus globulus under lo... 46 2.1 1
(CP000488) Candidatus Ruthia magnifica str. Cm (Calyptogena ... 46 2.1 1
(AC140104) Medicago truncatula clone mth2-10g22, complete se... 40 2.1 3
(FM250964) Caenorhabditis elegans EST, clone B05_ce5.trans.... 42 2.2 2
(EY350521) CAWZ17639.fwd CAWZ Helobdella robusta Primary Lat... 34 2.3 3
(BX088558) Mouse DNA sequence from clone RP23-252M5 on chrom... 40 2.3 4
(DD010736) Diagnosis of known genetic Parameters within the ... 40 2.3 13
(BX511073) Zebrafish DNA sequence from clone DKEY-245I10 in ... 38 2.3 6
(AM626256) Entamoeba dispar GSS, clone dispar125e11.q1k. 32 2.4 3
(EL506637) B06_PF-SAU3A-T3-M-P35_D.AB1 Blood stage Plasmodiu... 40 2.5 2
(EL506636) B06_PF-SAU3A-T3-M-P35.AB1 Blood stage Plasmodium ... 40 2.5 2
(EL508084) E04_PF-SAU3A-T3-S-P14.AB1 Blood stage Plasmodium ... 40 2.6 2
(EK399098) 1095469533501 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.6 3
(AC168823) Strongylocentrotus purpuratus clone R3-13E21, WOR... 44 2.6 5
(BJ400432) Dictyostelium discoideum cDNA clone:dds13d07, 3' ... 42 2.7 2
(AX458514) Sequence 60 from Patent WO0246454. 36 2.7 3
(EI354084) GM_WBc0104I20.r GM_WBc Glycine max genomic clone ... 28 2.8 4
(AU271101) Dictyostelium discoideum vegetative cDNA clone:VS... 40 2.9 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 36 3.0 4
(CR762429) Zebrafish DNA sequence from clone CH211-172J10 in... 42 3.0 5
(AL354916) Human DNA sequence from clone RP11-26K22 on chrom... 44 3.1 2
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 34 3.1 7
(AC159453) Trypanosoma brucei chromosome 5 clone RPCI93-5M21... 38 3.1 5
(ER814104) PPTGQ11TF Solanum tuberosum RHPOTKEY BAC ends Sol... 34 3.2 3
(BI815007) PfESToaa13a12.y1 Plasmodium falciparum 3D7 asexua... 40 3.2 2
(AM448769) Vitis vinifera contig VV78X090314.1, whole genome... 32 3.2 3
(AU060253) Dictyostelium discoideum slug cDNA, clone SLA718. 36 3.3 3
(CU638698) Zebrafish DNA sequence from clone CH1073-202I11 i... 38 3.5 4
(BC153220) Bos taurus solute carrier family 35 (UDP-N-acetyl... 30 3.5 4
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 34 3.5 6
(BX936386) Zebrafish DNA sequence from clone CH211-232P21 in... 40 3.6 5
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 32 3.6 10
(BI815361) PfESToaa17f06.y1 Plasmodium falciparum 3D7 asexua... 40 3.6 2
(CS468855) Sequence 46 from Patent EP1748080. 32 3.6 5
(CS419332) Sequence 46 from Patent WO2006094836. 32 3.6 5
(BQ739639) PfESToab48d03.y1 Plasmodium falciparum 3D7 asexua... 40 3.7 2
(BJ367509) Dictyostelium discoideum cDNA clone:ddc43a01, 5' ... 40 3.7 2
(AY232272) Dictyostelium discoideum putative protein Roco10 ... 36 3.8 4
(AC112774) Homo sapiens 3 BAC RP11-804J11 (Roswell Park Canc... 36 3.8 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 40 3.8 8
(BJ337988) Dictyostelium discoideum cDNA clone:dda59n13, 5' ... 40 3.8 2
(FP236162) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 3.9 5
(BJ339335) Dictyostelium discoideum cDNA clone:dda64p23, 5' ... 40 3.9 2
(AC097951) Rattus norvegicus clone CH230-127O19, *** SEQUENC... 34 4.0 2
(BJ352690) Dictyostelium discoideum cDNA clone:dda47h13, 3' ... 34 4.0 2
(AC132707) Rattus norvegicus clone CH230-288M15, WORKING DRA... 34 4.0 2
(BJ396678) Dictyostelium discoideum cDNA clone:dds43e15, 5' ... 40 4.0 2
(BJ368864) Dictyostelium discoideum cDNA clone:ddc48j07, 5' ... 40 4.0 2
(CU468501) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 4.0 2
(AC119114) Rattus norvegicus clone CH230-245F12, WORKING DRA... 34 4.0 2
(CT573393) Zebrafish DNA sequence from clone DKEY-48P11 in l... 42 4.0 6
(AC151067) Bos taurus clone CH240-398J18, WORKING DRAFT SEQU... 32 4.1 2
(BU498697) PfESToac01e10.y1 Plasmodium falciparum 3D7 asexua... 40 4.1 2
(AX344554) Sequence 5 from Patent WO0200932. 32 4.1 11
(BJ328154) Dictyostelium discoideum cDNA clone:dda23k05, 5' ... 40 4.1 2
(BQ596983) PfESToab25b06.y1 Plasmodium falciparum 3D7 asexua... 40 4.1 2
(BQ452389) PfESToaa96a10.y1 Plasmodium falciparum 3D7 asexua... 40 4.1 2
(BD453073) Diagnosis of Diseases Associated with tumor suppr... 34 4.1 5
(AX251552) Sequence 520 from Patent WO0168912. 34 4.1 5
(BJ336608) Dictyostelium discoideum cDNA clone:dda54b17, 5' ... 40 4.2 2
(BJ333701) Dictyostelium discoideum cDNA clone:dda43o17, 5' ... 40 4.2 2
(AP004928) Lotus japonicus genomic DNA, chromosome 2, clone:... 38 4.2 3
(BJ336015) Dictyostelium discoideum cDNA clone:dda52m11, 5' ... 40 4.2 2
(AC159868) Bos taurus clone CH240-72C7, WORKING DRAFT SEQUEN... 36 4.2 6
(BJ338996) Dictyostelium discoideum cDNA clone:dda63c19, 5' ... 40 4.2 2
(BJ330608) Dictyostelium discoideum cDNA clone:dda32k06, 5' ... 40 4.2 2
(AL953839) Mouse DNA sequence from clone RP23-325L22 on chro... 32 4.2 2
(BJ330754) Dictyostelium discoideum cDNA clone:dda32k16, 5' ... 40 4.2 2
(AC096162) Rattus norvegicus clone CH230-11E2, *** SEQUENCIN... 36 4.2 5
(BJ364279) Dictyostelium discoideum cDNA clone:ddc31k04, 5' ... 40 4.3 2
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 36 4.3 4
(AC176615) Strongylocentrotus purpuratus clone R3-3079L21, W... 36 4.3 6
(BJ379320) Dictyostelium discoideum cDNA clone:ddc34p08, 3' ... 34 4.3 2
(AC130148) Rattus norvegicus clone CH230-49B15, *** SEQUENCI... 36 4.3 5
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 34 4.4 5
(BJ336262) Dictyostelium discoideum cDNA clone:dda53e10, 5' ... 40 4.5 2
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 34 4.8 7
(FE809877) CCAG28868.g1 CCAG Petrolisthes cinctipes heart, g... 38 4.9 2
(CR774193) Zebrafish DNA sequence from clone DKEY-172H8 in l... 42 4.9 3
(EH587674) FDR306-P00026-DEPE-F_B17 FDR306 Danio rerio cDNA ... 40 4.9 2
(BX234554) Danio rerio genomic clone DKEY-244D23, genomic su... 40 5.0 2
(AC186955) Musa acuminata clone MA4_82I11, complete sequence. 44 5.0 3
(AC022042) Homo sapiens clone RP11-6L15, WORKING DRAFT SEQUE... 38 5.0 4
(BJ439164) Dictyostelium discoideum cDNA clone:ddv39j15, 3' ... 36 5.0 3
(BJ408804) Dictyostelium discoideum cDNA clone:dds47c05, 3' ... 34 5.1 2
(AC215389) Solanum lycopersicum chromosome 2 clone C02HBa012... 36 5.2 6
(CT100506) Sus scrofa genomic clone CH242-93G5, genomic surv... 42 5.2 2
(CT701848) Danio rerio EST, clone ZF_mu_290h22 5'. 28 5.2 4
(AC172310) Strongylocentrotus purpuratus clone R3-14D7, WORK... 44 5.3 3
(DY891540) CeleSEQ10259 Cunninghamella elegans pBluescript (... 40 5.3 2
(AF104350) Dictyostelium discoideum prespore-specific protei... 34 5.3 3
(EB457826) 1099341524915 12-DrosW-std-1P6Kb Drosophila willi... 34 5.4 2
(EB457081) 1099341412423 12-DrosW-std-1P6Kb Drosophila willi... 34 5.4 2
(GE797277) EST_scau_evk_889972 scauevk mixed_tissue Sebastes... 34 5.4 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 36 5.4 5
(FK041521) CF_WO0_95C04_SP6 Copepod Whole Organism, Normaliz... 34 5.4 2
(ES579768) FPS018.CR_N24 LSG10-01 Lymnaea stagnalis cDNA clo... 32 5.4 2
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 34 5.4 8
(DY888797) CeleSEQ6116 Cunninghamella elegans pBluescript (E... 38 5.5 2
(GE797278) EST_scau_evk_888052 scauevk mixed_tissue Sebastes... 34 5.5 2
(FK870934) EST_crog_evp_914867 crog_evp Caligus rogercressey... 36 5.7 2
(BD428871) Method and nucleic acids for pharmacogenomic meth... 32 5.8 6
(AX348350) Sequence 45 from Patent WO0202806. 32 5.8 6
(DY885569) CeleSEQ862 Cunninghamella elegans pBluescript (Ec... 34 5.8 2
(AC098448) Rattus norvegicus clone CH230-2I23, *** SEQUENCIN... 42 5.8 7
(AC148607) Medicago truncatula clone mth2-43g15, complete se... 40 5.8 7
(AC183527) Mus musculus BAC clone RP23-30G12 from chromosome... 36 5.8 6
(DY889859) CeleSEQ6821 Cunninghamella elegans pBluescript (E... 38 5.8 2
(ER801428) POTKA29TF Solanum tuberosum RHPOTKEY BAC ends Sol... 40 5.9 2
(EH605123) FDR306-P00026-DEPE-R_B17 FDR306 Danio rerio cDNA ... 40 5.9 2
(EA737491) Sequence 8937 from patent US 7368527. 36 5.9 4
(AC219925) Bos taurus clone CH240-318I24, WORKING DRAFT SEQU... 42 6.0 5
(FC915809) IC0AAA69AA05RM1 IVIA1 Citrus clementina cDNA clon... 36 6.0 3
(AC140154) Ornithorhynchus anatinus clone OA_Bb-169I9, WORKI... 38 6.1 5
(CX675527) UCRCS08_62H02_b Parent Washington Navel Orange Ca... 32 6.1 3
(CU104681) Zebrafish DNA sequence from clone CH73-104D2 in l... 42 6.1 4
(AM627758) Entamoeba dispar GSS, clone dispar24f03.p1k. 32 6.1 3
(EV849684) FTSAT77TF Tetrahymena thermophila SB210 cDNA libr... 34 6.2 2
(FK890116) EST_crog_evm_858146 crog_evm Caligus rogercressey... 34 6.2 2
(AF118151) Dictyostelium discoideum SNF1/AMP-activated kinas... 40 6.2 3
(AU072970) Dictyostelium discoideum slug cDNA, clone SSF592. 34 6.2 2
(EK324763) 1095467003042 Global-Ocean-Sampling_GS-31-01-01-1... 42 6.2 2
(AC012047) Homo sapiens chromosome 10 clone RP11-423F10, com... 40 6.5 4
(AU061176) Dictyostelium discoideum slug cDNA, clone SLD478. 30 6.5 3
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 6.6 8
(CU928220) Zebrafish DNA sequence from clone CH73-34J14 in l... 42 6.7 3
(EF433576) Biomphalaria tenagophila strain Taim-RS mitochond... 40 6.8 3
(CV718506) UCRCS08_0010J13_f Parent Washington Navel Orange ... 32 6.8 3
(CV718153) UCRCS08_0010B13_f Parent Washington Navel Orange ... 32 6.8 3
(AC216656) Solanum lycopersicum chromosome 6 clone C06SLe001... 38 6.9 4
(AY160683) Bos taurus solute carrier family 35 member 3 (slc... 30 7.0 5
(AX281161) Sequence 26 from Patent WO0177377. 32 7.1 4
(AR453049) Sequence 26 from patent US 6677731. 32 7.1 4
(AE001402) Plasmodium falciparum 3D7 chromosome 2 section 39... 34 7.3 4
(BX190846) Danio rerio genomic clone DKEY-204I8, genomic sur... 32 7.4 3
(GH693996) ut-964 American mink differentially expressed cDN... 40 7.4 2
(AY485402) Diptera sp. JEF-3 U_01_Muent_37 cytochrome oxidas... 30 7.6 3
(AY485401) Diptera sp. JEF-2 U_01_Muent_36 cytochrome oxidas... 30 7.6 3
(BX855587) Zebrafish DNA sequence from clone DKEY-103L5 in l... 38 7.7 3
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 7.9 7
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 8.0 6
(AC168398) Strongylocentrotus purpuratus clone R3-4002K7, WO... 40 8.2 4
(AC176544) Strongylocentrotus purpuratus clone R3-3075O20, W... 34 8.2 5
(CU928227) Zebrafish DNA sequence from clone CH73-288O11 in ... 44 8.3 1
(CU467626) Zebrafish DNA sequence from clone CH1073-202A14 i... 44 8.3 1
(CU462913) Zebrafish DNA sequence from clone CH73-208H1 in l... 44 8.3 1
(CU138517) Zebrafish DNA sequence from clone CH211-165C13. 44 8.3 1
(CT998554) Zebrafish DNA sequence from clone CH211-170A17 in... 44 8.3 1
(CR847783) Zebrafish DNA sequence from clone DKEYP-2C8 in li... 44 8.3 1
(CR354584) Zebrafish DNA sequence from clone DKEY-7B6 in lin... 44 8.3 1
(BX927325) Zebrafish DNA sequence from clone DKEYP-47G1 in l... 44 8.3 1
(BX897736) Zebrafish DNA sequence from clone CH211-181B15 in... 44 8.3 1
(BX511115) Zebrafish DNA sequence from clone CH211-101B18 in... 44 8.3 1
(BX294103) Zebrafish DNA sequence from clone CH211-257A8 in ... 44 8.3 1
(AL929072) Zebrafish DNA sequence from clone CH211-140B8. 44 8.3 1
(AC186547) Gallus gallus BAC clone TAM32-71G21 from chromoso... 44 8.3 1
(AL670648) Mouse DNA sequence from clone RP23-288N2 on chrom... 44 8.3 1
(AC160760) Mus musculus BAC clone RP23-449G13 from chromosom... 44 8.3 1
(AC151289) Mus musculus BAC clone RP23-364K1 from chromosome... 44 8.3 1
(AC147228) Mus musculus BAC clone RP23-159I8 from chromosome... 44 8.3 1
(AC132944) Mus musculus BAC clone RP24-284N8 from chromosome... 44 8.3 1
(AC129211) Mus musculus BAC clone RP24-348E18 from chromosom... 44 8.3 1
(AC129207) Mus musculus chromosome 5 clone RP24-280N5, compl... 44 8.3 1
(AC129082) Mus musculus BAC clone RP24-324M11 from chromosom... 44 8.3 1
(AC127432) Mus musculus BAC clone RP24-535L6 from 5, complet... 44 8.3 1
(AC124415) Mus musculus BAC clone RP24-298J2 from chromosome... 44 8.3 1
(AC114574) Mus musculus chromosome 6, clone RP23-151F20, com... 44 8.3 1
(AC093353) Mus musculus chromosome 10, clone RP23-19C22, com... 44 8.3 1
(AC216766) Populus trichocarpa clone POP029-O12, complete se... 44 8.3 1
(AC191166) Canis Familiaris chromosome 14, clone XX-126F24, ... 44 8.3 1
(AC191164) Canis Familiaris chromosome 27, clone XX-53N21, c... 44 8.3 1
(AF317620) Lymantria dispar aminopeptidase N4 (APN4) mRNA, c... 44 8.3 1
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 44 8.3 1
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 44 8.3 1
(AB098196) Codonosiga gracilis CgPTK-h mRNA for receptor-typ... 44 8.3 1
(AL390763) Human DNA sequence from clone RP11-264E18 on chro... 44 8.3 1
(AC161318) Loxodonta africana clone VMRC15-466F21, WORKING D... 44 8.3 1
(AC161312) Loxodonta africana clone VMRC15-25O13, WORKING DR... 44 8.3 1
(AC148134) Atelerix albiventris clone LB4-473L14, WORKING DR... 44 8.3 1
(AC148133) Atelerix albiventris clone LB4-410F7, WORKING DRA... 44 8.3 1
(AC137059) Papio anubis clone RP41-141B3, WORKING DRAFT SEQU... 44 8.3 1
(AC133321) Rattus norvegicus clone CH230-178I15, *** SEQUENC... 44 8.3 1
(AC132031) Rattus norvegicus clone CH230-63H4, *** SEQUENCIN... 44 8.3 1
(AC132014) Rattus norvegicus clone CH230-451J6, WORKING DRAF... 44 8.3 1
(AC127653) Rattus norvegicus clone CH230-48E17, *** SEQUENCI... 44 8.3 1
(AC109124) Rattus norvegicus clone CH230-141J14, WORKING DRA... 44 8.3 1
(AC104398) Rattus norvegicus clone CH230-128I24, *** SEQUENC... 44 8.3 1
(AC104199) Mus musculus clone RP24-501G5, WORKING DRAFT SEQU... 44 8.3 1
(AC103439) Rattus norvegicus clone CH230-161I2, WORKING DRAF... 44 8.3 1
(AC099001) Rattus norvegicus clone CH230-117H12, *** SEQUENC... 44 8.3 1
(AC095958) Rattus norvegicus clone CH230-26I11, *** SEQUENCI... 44 8.3 1
(CU466422) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.3 1
(CU466255) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.3 1
(CU024906) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.3 1
(CT954265) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.3 1
(CT573274) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.3 1
(CR407565) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.3 1
(AC221828) Bos taurus clone CH240-384F6, WORKING DRAFT SEQUE... 44 8.3 1
(AC221818) Bos taurus clone CH240-383C24, WORKING DRAFT SEQU... 44 8.3 1
(AC212496) Homo sapiens chromosome 7 clone CH17-372F17, *** ... 44 8.3 1
(AC201137) Strongylocentrotus purpuratus clone R3-14B9, WORK... 44 8.3 1
(AC197584) Zea mays chromosome 8 clone CH201-14H13; ZMMBBc00... 44 8.3 1
(AC187868) Zea mays chromosome 8 clone CH201-118M1; ZMMBBc01... 44 8.3 1
(AC184734) Atelerix albiventris clone LB4-490E6, WORKING DRA... 44 8.3 1
(AC184314) Strongylocentrotus purpuratus clone R3-3012A5, WO... 44 8.3 1
(AC183842) Echinops telfairi clone CH238-148L22, WORKING DRA... 44 8.3 1
(AC181315) Strongylocentrotus purpuratus clone R3-4017M11, W... 44 8.3 1
(AC181141) Strongylocentrotus purpuratus clone R3-16F8, WORK... 44 8.3 1
(AC180930) Strongylocentrotus purpuratus clone R3-3061H19, W... 44 8.3 1
(AC180600) Strongylocentrotus purpuratus clone R3-3092L18, W... 44 8.3 1
(AC180593) Strongylocentrotus purpuratus clone R3-3092I16, W... 44 8.3 1
(AC179983) Strongylocentrotus purpuratus clone R3-3036G18, W... 44 8.3 1
(AC179978) Strongylocentrotus purpuratus clone R3-19D10, WOR... 44 8.3 1
(AC178655) Strongylocentrotus purpuratus clone R3-11O22, WOR... 44 8.3 1
(AC177288) Strongylocentrotus purpuratus clone R3-1033F10, W... 44 8.3 1
(AC177287) Strongylocentrotus purpuratus clone R3-44J22, WOR... 44 8.3 1
(AC176284) Strongylocentrotus purpuratus clone R3-3057D18, W... 44 8.3 1
(AC176207) Strongylocentrotus purpuratus clone R3-3063I13, W... 44 8.3 1
(AC174994) Echinops telfairi clone CH238-367C11, WORKING DRA... 44 8.3 1
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 44 8.3 1
(AZ587646) 1M0395P22F Mouse 10kb plasmid UUGC1M library Mus ... 44 8.3 1
(FI503064) AHT1B5RGH003-M12TP AHT1BS-Rearray Arachis hypogae... 44 8.3 1
(ET863963) CHO_OF192xf10r1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.3 1
(EK222196) 1095460144348 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.3 1
(EK209914) 1095460095199 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.3 1
(AQ206097) HS_3240_A2_C02_MR CIT Approved Human Genomic Sper... 44 8.3 1
(EJ487538) 1095403514071 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.3 1
(EJ465362) 1095390188788 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.3 1
(EJ328325) 1092963411475 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.3 1
(EJ241807) 1095328072171 Global-Ocean-Sampling_GS-27-01-01-1... 44 8.3 1
(EI923686) VUH2-62B7TR VUUBBa (VUH2) Vigna unguiculata genom... 44 8.3 1
(ED807639) ML__Ba0023J20f ML__Ba Mimulus lewisii genomic, ge... 44 8.3 1
(DX939816) CHORI105-28C11.TF.1 CHORI105.pEpiFOS5 Trypanosoma... 44 8.3 1
(CZ337577) ZMMBF0104F02f ZMMBF Zea mays genomic clone ZMMBF0... 44 8.3 1
(CZ291310) cp75a02.f Candida parapsilosis Random Genomic Lib... 44 8.3 1
(CZ286628) cp48a04.r Candida parapsilosis Random Genomic Lib... 44 8.3 1
(CZ280344) cp10h09.r Candida parapsilosis Random Genomic Lib... 44 8.3 1
(CG749225) P043-2-E10.za Ppa EcoRI BAC Library Pristionchus ... 44 8.3 1
(CG266364) OG2CE18TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 8.3 1
(BZ175455) CH230-443K13.TV CHORI-230 Segment 2 Rattus norveg... 44 8.3 1
(EG142021) MSAM252793_0416_0548 LCM-dissected maize inbred l... 44 8.3 1
(DY388879) CL__Eb0001K14.r CL__Eb Curcuma longa cDNA clone C... 44 8.3 1
(AU284785) Dictyostelium discoideum gamete cDNA clone:FC-BK2... 44 8.3 1
(AU284764) Dictyostelium discoideum gamete cDNA clone:FC-BK0... 44 8.3 1
(AM538416) Paracentrotus lividus EST, clone MPMGp1171K03196Q... 44 8.3 1
(CJ963139) Triticum aestivum cDNA clone:whchul31d11, 3' end. 44 8.3 1
(CJ955134) Triticum aestivum cDNA clone:whchul6e10, 5' end. 44 8.3 1
(CJ951119) Triticum aestivum cDNA clone:whchul31d11, 5' end. 44 8.3 1
(CJ735559) Triticum aestivum cDNA clone rwhsh10m24 3', Y.Ogi... 44 8.3 1

>(AU061864) Dictyostelium discoideum slug cDNA, clone SLG390.
Length = 505

Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus


Query: 1 aaactctttagtgtctgaagttaataataataataccactaccatcactaataccacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaactctttagtgtctgaagttaataataataataccactaccatcactaataccacctc 60


Query: 61 tgacaatatcacaacgacatcaatagcagtctccacaccaatggatggaatagagtctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacaatatcacaacgacatcaatagcagtctccacaccaatggatggaatagagtctaa 120


Query: 121 agatttaaatatcaccgcaacaatagctgaaaacgaaatctcaacagcaacaaccacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatttaaatatcaccgcaacaatagctgaaaacgaaatctcaacagcaacaaccacatt 180


Query: 181 aataaatactgaagaagcagaagcaacaaccaccacattcacaaatacagaggaaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaatactgaagaagcagaagcaacaaccaccacattcacaaatacagaggaaacaac 240


Query: 241 tactactacaacaacaaaagaaatagatcaaatacctattaatggagaggtgataaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactactacaacaacaaaagaaatagatcaaatacctattaatggagaggtgataaatgg 300


Query: 301 taatgaaattccgggagataatgttgctcaacaaatgaaagttgatagtgataacaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatgaaattccgggagataatgttgctcaacaaatgaaagttgatagtgataacaccaa 360


Query: 361 tgaaactaatcaaaaagaaaataatcaaaatgataataatagtcaaagtataaatccaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaaactaatcaaaaagaaaataatcaaaatgataataatagtcaaagtataaatccaac 420


Query: 421 aaccagcaatcaaactaataaaattacaaatgacaatgttaataatagcgaaacagatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaccagcaatcaaactaataaaattacaaatgacaatgttaataatagcgaaacagatca 480


Query: 481 aattttaaattttatacaggataa 504
||||||||||||||||||||||||
Sbjct: 481 aattttaaattttatacaggataa 504

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 869,557,723
Number of extensions: 63989541
Number of successful extensions: 8944845
Number of sequences better than 10.0: 555
Length of query: 814
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 790
Effective length of database: 99,340,224,878
Effective search space: 78478777653620
Effective search space used: 78478777653620
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U01337-1 (Contig-U01337-1Q) /CSM_Contig/Contig-U01337-1Q.Seq.d
(814 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 617,131,902
Number of extensions: 6128068
Number of successful extensions: 19426
Number of sequences better than 10.0: 0
Number of HSP's gapped: 18683
Number of HSP's successfully gapped: 0
Length of query: 271
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 145
Effective length of database: 643,374,430
Effective search space: 93289292350
Effective search space used: 93289292350
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.45 alm: 0.54 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

28.0 %: cytoplasmic
24.0 %: mitochondrial
24.0 %: nuclear
16.0 %: cytoskeletal
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U01337-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0