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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U08780-1
Contig ID Contig-U08780-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Contig-U08780-1Q.Seq.d
AATTTTTATTCATTTTTTTTAAAAAGATAATTATTATTATTTTTCATAAA
ATAATAGAAAAATGATTGAAGAACATAATTGTTTTGAAGAATTTATAAAT
ACAGCAGCAATTGGTGAACAACAAGTTTATGGTGAATATAAATCTAAATT
AGATTCATTTACAGATGAAAGTAAATTACCATATGAATTATTATTAGAGA
GAAAGAATTTAGTAGAATTGAAAATTTCTGATGAAGAATATAAAAAGAGT
GAATCTGCATTAAAAACACCAAATCCAACATTATTACAAAAGTTTCAAAT
TAATTTTTATCAAACTATTGAATCGATTAATCAAGTATTTAAACCATCAT
CATCATCATCAAATCAATCATCATCATCGTCCTCCTCGAATGAAGATGAT
TCATTACAAAATAAAAAGATTAAAGTAATGTCATGGCATCCACAACATAG
ATTACTTGCAGTTTGTAATAAAAATGATGTTATTTATATCTACTATTTCC
CAAATCAAGATATGTATGGTATGGGTAATGTCAGACCTTTAACATTATGG
TTTGAATTACAATCAAAAGTTTATGATATACAATGGAAACCTTTCTTACC
ATATACTTTAGCTGTTGCT----------TATCCATACTTTTTATCAAAT
ACAATTACATGGTCATCAAATGGTTTACAATTAGCATGTGGTTCAACTAA
TCATAGTTCAATTCTATTATGGGATGTTGTATCTAGAGTACCAACATTCA
TACCACGTTATAATGGTAACTCATTATTAGTTTGGTCTCCAAAAAATGAT
TATCTTTTATCTTGTGGTGGTAAAACTTGTAGAATTTTCGATATCTCAAA
ATGGGATTACAATAATAAAGAATGGCCAATGTTAACAAATTATCAAACAG
GATCATGGAATGGAAAAGGTGAATATTTAGCAGTTGCAAGTGGTGATAGA
ATTCAGTTTATTCAATGTATAAATAGAGCATTTGAATCAGGTGGTGAATT
AATGTATGTTGAGAAAACTTCAACCTATAGATTACAAAATGTTGGTGGTA
GTGGTGGTGGTTCAAGTAGTAGTGAATTATTTTTAGGCGGACATATAAAG
AAAATTGCATGGTCACCTGATAGTCAAAGATTGGCTGTCATCTTTTATTT
AAATAGCAAGAGTAGAAATAATGATACTTATTGTGCAATCTATAAAATTA
AAACTTATCCTAAATTTTCTGTAACACCAAGAGGTTTCATAAGGTCAAAA
GATCAATCAATTCAATCAGTTTCTTTTGTCCCAAATTATAAAAAAGGTTC
TTTATTATCAATTGCCTACAATGATGGAACAATTAAATTTTTCCCATTAT
TATATCAATATAAACAATAAGAAAATAAAGATTTTACACTTTATTATCAT
TATATTATTAGTTGTTATTATTATTATTTTTTTTTTTTTTTTTTTTACTA
TATAATACATATTTAATTGGTTGTTGGTTGTTGTTGTTGTTCTAATAATC
TTTTAGTGGTTCTTTTTTCAAAATATTCCAATTCTTTCTTTTTAAATTCT
TCTTGTGTTTGTGCTTCTGGTGGGTAAACAACAAATTGATGTTTCATAAT
TAAATTATCTAATCTGTCAGGGTCTAAAACATGAATAGTTGCTATGATTG
GCATTCCAAAGTATACACCCCATTTTAATAATTCTAGTGCTTTAACTTTT
TGTGGTGCCATTTTATTGTATGAATTACTTTTATT
Gap gap included
Contig length 1725
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7268452
End point 7266726
Strand (PLUS/MINUS) MINUS
Number of clones 9
Number of EST 15
Link to clone list U08780
List of clone(s) 

est1=CFG838F,1,620
est2=VFI871F,2,498
est3=AFI409F,9,620
est4=AFH742F,12,617
est5=CFG822F,215,340
est6=AFI409Z,621,1393
est7=VFI871Z,637,1381
est8=AFH742Z,639,1382
est9=SSE416E,729,1167
est10=CFG838Z,735,1375
est11=SSK827E,1001,1684
est12=CFG822Z,1046,1379
est13=VSB478Z,1195,1369
est14=VSI125F,1428,1723
est15=VSI125Z,1428,1580
Translated Amino Acid sequence 
ifihff*kdnyyyfs*NNRKMIEEHNCFEEFINTAAIGEQQVYGEYKSKLDSFTDESKLP
YELLLERKNLVELKISDEEYKKSESALKTPNPTLLQKFQINFYQTIESINQVFKPSSSSS
NQSSSSSSSNEDDSLQNKKIKVMSWHPQHRLLAVCNKNDVIYIYYFPNQDMYGMGNVRPL
TLWFELQSKVYDIQWKPFLPYTLAVA---

---YPYFLSNTITWSSNGLQLACGSTNHSSILLWDVVSRVPTFIPRYNGNSLLVWSPKND
YLLSCGGKTCRIFDISKWDYNNKEWPMLTNYQTGSWNGKGEYLAVASGDRIQFIQCINRA
FESGGELMYVEKTSTYRLQNVGGSGGGSSSSELFLGGHIKKIAWSPDSQRLAVIFYLNSK
SRNNDTYCAIYKIKTYPKFSVTPRGFIRSKDQSIQSVSFVPNYKKGSLLSIAYNDGTIKF
FPLLYQYKQ*enkdftlyyhyiiscyyyyffffffyyiihi*lvvgccccsnnllvvlfs
kysnsfflnsscvcasgg*ttn*cfiiklsnlsgskt*ivamigipkytphfnnssaltf
cgaillyelll
Translated Amino Acid sequence (All Frames) 
Frame A:
nfysfflkr*lllffik**knd*rt*lf*riykyssnw*ttslw*i*i*irfiyr*k*it
i*iiirekefsrienf**ri*ke*icikntksniitkvsn*flsny*id*ssi*tiiiii
ksiiiivlle*r*fitk*kd*snvmastt*itcsl**k*cylyllfpksryvwyg*cqtf
nimv*itiksl*ytmetfltiyfscc---

---YPYFLSNTITWSSNGLQLACGSTNHSSILLWDVVSRVPTFIPRYNGNSLLVWSPKND
YLLSCGGKTCRIFDISKWDYNNKEWPMLTNYQTGSWNGKGEYLAVASGDRIQFIQCINRA
FESGGELMYVEKTSTYRLQNVGGSGGGSSSSELFLGGHIKKIAWSPDSQRLAVIFYLNSK
SRNNDTYCAIYKIKTYPKFSVTPRGFIRSKDQSIQSVSFVPNYKKGSLLSIAYNDGTIKF
FPLLYQYKQ*enkdftlyyhyiiscyyyyffffffyyiihi*lvvgccccsnnllvvlfs
kysnsfflnsscvcasgg*ttn*cfiiklsnlsgskt*ivamigipkytphfnnssaltf
cgaillyelll

Frame B:
ifihff*kdnyyyfs*NNRKMIEEHNCFEEFINTAAIGEQQVYGEYKSKLDSFTDESKLP
YELLLERKNLVELKISDEEYKKSESALKTPNPTLLQKFQINFYQTIESINQVFKPSSSSS
NQSSSSSSSNEDDSLQNKKIKVMSWHPQHRLLAVCNKNDVIYIYYFPNQDMYGMGNVRPL
TLWFELQSKVYDIQWKPFLPYTLAVA---

---ihtfyqiqlhghqmvyn*hvvqliivqfyygmlyleyqhsyhvimvthy*fglqkmi
ifylvvvklvefsisqngitiikngqc*qiikqdhgmekvni*qlqvviefslfnv*ieh
lnqvvn*cmlrklqpidykmlvvvvvvqvvvnyf*adi*rklhghlivkdwlssfi*iar
veimilivqsiklklilnfl*hqevs*gqkinqfnqfllsqiikkvlyyqlptmmeqlnf
shyyininnkkikilhfiiiillvviiiiffffffti*yifnwllvvvvvliif*wfffq
nipilsf*illvfvllvgkqqidvs*lnylicqglkhe*ll*lafqsihpiliilvl*lf
vvpfycmnyfy

Frame C:
flfiffkkiiiiifhkiiek*lkniivlknl*iqqqlvnnkfmvninln*ihlqmkvnyh
mnyy*reri**n*kflmknikrvnlh*khqiqhyyksfklifikllnrlikylnhhhhhq
inhhhrpprmkmihykikrlk*chgihnidylqfvikmmlfistisqikicmvwvmsdl*
hyglnynqkfmiyngnlsyhil*ll---

---silfikynymvikwftismwfn*s*fnsimgcci*stnihttl*w*liislvskk*l
sfilww*nl*nfrylkmglq**rmanvnklsnrimewkr*ifssckw**nsvysmyk*si
*irw*invc*enfnl*itkcww*wwwfk***iifrrtykencmvt**skigchllfk*qe
*k**yllcnl*n*nls*ifcntkrfhkvkrsinsisffcpkl*krffiinclq*wnn*if
piiisi*tirk*rfytllslyy*lllllffffffllyntyligcwllllf**sfsgsffk
ifqfflfkfflclcfwwvnnklmfhn*ii*svrv*nmnscydwhskvytpf**f*cfnfl
wchfiv*itfi
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U08780-1 (Contig-U08780-1Q)
/CSM_Contig/Contig-U08780-1Q.Seq.d
         (1735 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Conti...  1947  0.0
Contig-U12846-1 (Contig-U12846-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11430-1 (Contig-U11430-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U13348-1 (Contig-U13348-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12547-1 (Contig-U12547-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12113-1 (Contig-U12113-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12054-1 (Contig-U12054-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11881-1 (Contig-U11881-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11803-1 (Contig-U11803-1Q) /CSM_Contig/Conti...    38  0.031

>Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Contig-U08780-1Q.Seq.d
          Length = 1735

 Score = 1947 bits (982), Expect = 0.0
 Identities = 1012/1012 (100%)
 Strand = Plus / Plus

                                                                        
Query: 379  gtcctcctcgaatgaagatgattcattacaaaataaaaagattaaagtaatgtcatggca 438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379  gtcctcctcgaatgaagatgattcattacaaaataaaaagattaaagtaatgtcatggca 438

                                                                        
Query: 439  tccacaacatagattacttgcagtttgtaataaaaatgatgttatttatatctactattt 498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439  tccacaacatagattacttgcagtttgtaataaaaatgatgttatttatatctactattt 498

                                                                        
Query: 499  cccaaatcaagatatgtatggtatgggtaatgtcagacctttaacattatggtttgaatt 558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  cccaaatcaagatatgtatggtatgggtaatgtcagacctttaacattatggtttgaatt 558

                                                                        
Query: 559  acaatcaaaagtttatgatatacaatggaaacctttcttaccatatactttagctgttgc 618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559  acaatcaaaagtttatgatatacaatggaaacctttcttaccatatactttagctgttgc 618

                                                                        
Query: 619  tnnnnnnnnnntatccatactttttatcaaatacaattacatggtcatcaaatggtttac 678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619  tnnnnnnnnnntatccatactttttatcaaatacaattacatggtcatcaaatggtttac 678

                                                                        
Query: 679  aattagcatgtggttcaactaatcatagttcaattctattatgggatgttgtatctagag 738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679  aattagcatgtggttcaactaatcatagttcaattctattatgggatgttgtatctagag 738

                                                                        
Query: 739  taccaacattcataccacgttataatggtaactcattattagtttggtctccaaaaaatg 798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739  taccaacattcataccacgttataatggtaactcattattagtttggtctccaaaaaatg 798

                                                                        
Query: 799  attatcttttatcttgtggtggtaaaacttgtagaattttcgatatctcaaaatgggatt 858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799  attatcttttatcttgtggtggtaaaacttgtagaattttcgatatctcaaaatgggatt 858

                                                                        
Query: 859  acaataataaagaatggccaatgttaacaaattatcaaacaggatcatggaatggaaaag 918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859  acaataataaagaatggccaatgttaacaaattatcaaacaggatcatggaatggaaaag 918

                                                                        
Query: 919  gtgaatatttagcagttgcaagtggtgatagaattcagtttattcaatgtataaatagag 978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  gtgaatatttagcagttgcaagtggtgatagaattcagtttattcaatgtataaatagag 978

                                                                        
Query: 979  catttgaatcaggtggtgaattaatgtatgttgagaaaacttcaacctatagattacaaa 1038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979  catttgaatcaggtggtgaattaatgtatgttgagaaaacttcaacctatagattacaaa 1038

                                                                        
Query: 1039 atgttggtggtagtggtggtggttcaagtagtagtgaattatttttaggcggacatataa 1098
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 atgttggtggtagtggtggtggttcaagtagtagtgaattatttttaggcggacatataa 1098

                                                                        
Query: 1099 agaaaattgcatggtcacctgatagtcaaagattggctgtcatcttttatttaaatagca 1158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 agaaaattgcatggtcacctgatagtcaaagattggctgtcatcttttatttaaatagca 1158

                                                                        
Query: 1159 agagtagaaataatgatacttattgtgcaatctataaaattaaaacttatcctaaatttt 1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 agagtagaaataatgatacttattgtgcaatctataaaattaaaacttatcctaaatttt 1218

                                                                        
Query: 1219 ctgtaacaccaagaggtttcataaggtcaaaagatcaatcaattcaatcagtttcttttg 1278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ctgtaacaccaagaggtttcataaggtcaaaagatcaatcaattcaatcagtttcttttg 1278

                                                                        
Query: 1279 tcccaaattataaaaaaggttctttattatcaattgcctacaatgatggaacaattaaat 1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 tcccaaattataaaaaaggttctttattatcaattgcctacaatgatggaacaattaaat 1338

                                                                
Query: 1339 ttttcccattattatatcaatataaacaataagaaaataaagattttacact 1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 ttttcccattattatatcaatataaacaataagaaaataaagattttacact 1390


 Score =  642 bits (324), Expect = 0.0
 Identities = 324/324 (100%)
 Strand = Plus / Plus

                                                                       
Query: 21  aaaaagataattattattatttttcataaaataatagaaaaatgattgaagaacataatt 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  aaaaagataattattattatttttcataaaataatagaaaaatgattgaagaacataatt 80

                                                                       
Query: 81  gttttgaagaatttataaatacagcagcaattggtgaacaacaagtttatggtgaatata 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  gttttgaagaatttataaatacagcagcaattggtgaacaacaagtttatggtgaatata 140

                                                                       
Query: 141 aatctaaattagattcatttacagatgaaagtaaattaccatatgaattattattagaga 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aatctaaattagattcatttacagatgaaagtaaattaccatatgaattattattagaga 200

                                                                       
Query: 201 gaaagaatttagtagaattgaaaatttctgatgaagaatataaaaagagtgaatctgcat 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagaatttagtagaattgaaaatttctgatgaagaatataaaaagagtgaatctgcat 260

                                                                       
Query: 261 taaaaacaccaaatccaacattattacaaaagtttcaaattaatttttatcaaactattg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaacaccaaatccaacattattacaaaagtttcaaattaatttttatcaaactattg 320

                                   
Query: 321 aatcgattaatcaagtatttaaac 344
           ||||||||||||||||||||||||
Sbjct: 321 aatcgattaatcaagtatttaaac 344


 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1492 ctaataatcttttagtggttcttttttcaaaatattccaattctttctttttaaattctt 1551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 ctaataatcttttagtggttcttttttcaaaatattccaattctttctttttaaattctt 1551

                                                                        
Query: 1552 cttgtgtttgtgcttctggtgggtaaacaacaaattgatgtttcataattaaattatcta 1611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 cttgtgtttgtgcttctggtgggtaaacaacaaattgatgtttcataattaaattatcta 1611

                                                                        
Query: 1612 atctgtcagggtctaaaacatgaatagttgctatgattggcattccaaagtatacacccc 1671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 atctgtcagggtctaaaacatgaatagttgctatgattggcattccaaagtatacacccc 1671

                                                                        
Query: 1672 attttaataattctagtgctttaactttttgtggtgccattttattgtatgaattacttt 1731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 attttaataattctagtgctttaactttttgtggtgccattttattgtatgaattacttt 1731

                
Query: 1732 tatt 1735
            ||||
Sbjct: 1732 tatt 1735


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1447 actatataatacatatttaa 1466
            ||||||||||||||||||||
Sbjct: 1447 actatataatacatatttaa 1466


 Score = 30.2 bits (15), Expect = 7.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 30   attattattattttt 44
            |||||||||||||||
Sbjct: 1417 attattattattttt 1431


>Contig-U12846-1 (Contig-U12846-1Q) /CSM_Contig/Contig-U12846-1Q.Seq.d
          Length = 791

 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 taccatatgaattattatta 196
           ||||||||||||||||||||
Sbjct: 723 taccatatgaattattatta 704


>Contig-U11430-1 (Contig-U11430-1Q) /CSM_Contig/Contig-U11430-1Q.Seq.d
          Length = 1466

 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1535 tttctttttaaattcttctt 1554
            ||||||||||||||||||||
Sbjct: 259  tttctttttaaattcttctt 240


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,932
Number of Sequences: 6905
Number of extensions: 44932
Number of successful extensions: 5860
Number of sequences better than 10.0: 915
length of query: 1735
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1719
effective length of database: 5,564,391
effective search space: 9565188129
effective search space used: 9565188129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA 
Query= Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Contig-U08780-1Q.Seq.d
         (1735 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ343731) Dictyostelium discoideum cDNA clone:dda17b04, 3' ...  1489   0.0    1
(BJ432442) Dictyostelium discoideum cDNA clone:ddv18n18, 3' ...  1457   0.0    1
(BJ343502) Dictyostelium discoideum cDNA clone:dda16d11, 3' ...  1453   0.0    1
(C94314) Dictyostelium discoideum slug cDNA, clone SSK827.       1275   0.0    1
(BJ372837) Dictyostelium discoideum cDNA clone:ddc14l10, 3' ...  1178   0.0    2
(AC115581) Dictyostelium discoideum chromosome 2 map complem...   829   0.0    8
(BJ359415) Dictyostelium discoideum cDNA clone:ddc14l10, 5' ...   642   0.0    2
(BJ326572) Dictyostelium discoideum cDNA clone:dda17b04, 5' ...   622   0.0    2
(BJ326381) Dictyostelium discoideum cDNA clone:dda16d11, 5' ...   478   0.0    3
(BJ414303) Dictyostelium discoideum cDNA clone:ddv18n18, 5' ...   642   0.0    2
(BJ372792) Dictyostelium discoideum cDNA clone:ddc14l06, 3' ...   351   e-147  2
(AU268189) Dictyostelium discoideum vegetative cDNA clone:VS...   347   9e-91  1
(AU268190) Dictyostelium discoideum vegetative cDNA clone:VS...   303   1e-77  1
(AU072399) Dictyostelium discoideum slug cDNA, clone SSE416.      266   3e-66  1
(AU037883) Dictyostelium discoideum slug cDNA, clone SSE416.      143   8e-61  2
(BJ359378) Dictyostelium discoideum cDNA clone:ddc14l06, 5' ...   226   2e-54  1
(AU262037) Dictyostelium discoideum vegetative cDNA clone:VS...   105   6e-18  1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   2e-05  15
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.004  15
(Z98551) Plasmodium falciparum MAL3P6.                             36   0.007  10
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.008  15
(BX247884) Zebrafish DNA sequence from clone CH211-174M1 in ...    38   0.010  10
(AC179028) Strongylocentrotus purpuratus clone R3-1108E15, W...    40   0.012  7
(AM463778) Vitis vinifera contig VV78X156197.5, whole genome...    54   0.018  1
(CT535883) A BAC library has been constructed from cultivar ...    54   0.018  1
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    38   0.025  9
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ...    32   0.031  15
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.036  18
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    40   0.042  14
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   0.051  12
(BX248583) Blochmannia floridanus complete genome.                 38   0.051  18
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome.    42   0.054  18
(AL844506) Plasmodium falciparum chromosome  7.                    38   0.058  15
(AM440046) Vitis vinifera contig VV78X271304.8, whole genome...    36   0.073  6
(CZ536416) SRAA-aad03b05.g1 Strongyloides ratti whole genome...    40   0.11   3
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   0.12   13
(AC158376) Medicago truncatula chromosome 2 clone mth2-64d17...    40   0.13   6
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...    36   0.14   7
(AC131513) Strongylocentrotus purpuratus clone Sp91A10, *** ...    38   0.15   13
(CR762496) Zebrafish DNA sequence from clone DKEY-212J2 in l...    34   0.16   2
(AC203555) Medicago truncatula clone mth2-58e9, complete seq...    36   0.17   2
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4...    32   0.18   16
(AC156829) Medicago truncatula clone mth2-123c10, WORKING DR...    36   0.18   2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   0.19   24
(AL096782) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    34   0.21   8
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    32   0.24   14
(AZ767632) 1M0566L21R Mouse 10kb plasmid UUGC1M library Mus ...    38   0.27   2
(AL844507) Plasmodium falciparum chromosome 8.                     42   0.32   16
(AC207598) Pan troglodytes BAC clone CH251-404N5 from chromo...    34   0.35   9
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    34   0.36   15
(AC013748) Homo sapiens chromosome 4 clone RP11-24H18 map 4,...    38   0.38   10
(EF533697) Glycine max clone BAC GM_WBb035N07, *** SEQUENCIN...    46   0.38   10
(AC193480) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    44   0.40   5
(AC083799) Homo sapiens 3 BAC RP11-332M2 (Roswell Park Cance...    46   0.40   8
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s...    32   0.41   16
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         38   0.42   20
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    34   0.42   14
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.44   23
(EI487427) PV_GBa0102F09.r PV_GBa Phaseolus vulgaris genomic...    48   0.45   2
(EJ593448) 1092961064637 Global-Ocean-Sampling_GS-29-01-01-1...    46   0.46   2
(AC180147) Strongylocentrotus purpuratus clone R3-4004D19, W...    42   0.48   7
(AC216836) Populus trichocarpa clone POP013-I22, complete se...    38   0.48   7
(AL137015) Human DNA sequence from clone RP13-272N16 on chro...    36   0.51   6
(AL731792) Mouse DNA sequence from clone RP23-189P1 on chrom...    44   0.51   3
(ER466591) 1092963926092 Global-Ocean-Sampling_GS-35-01-01-1...    34   0.54   3
(AC197586) Trichinella spiralis BAC clone TS195-28H12 from c...    38   0.56   8
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    34   0.59   11
(EJ961422) 1093022005691 Global-Ocean-Sampling_GS-30-02-01-1...    32   0.62   4
(AC097487) Homo sapiens BAC clone RP11-217C7 from 4, complet...    36   0.67   8
(AC196547) Homo sapiens chromosome 3 clone WI2-3154I13, comp...    44   0.71   3
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6...    36   0.72   8
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    34   0.73   16
(AC116985) Dictyostelium discoideum chromosome 2 map 6135249...    34   0.75   6
(AR551261) Sequence 6392 from patent US 6747137.                   40   0.94   3
(AC158574) Mus musculus chromosome 7, clone RP24-275O6, comp...    42   0.94   5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    32   1.1    13
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    38   1.1    9
(CT573220) Zebrafish DNA sequence from clone CH211-194O20 in...    48   1.1    1
(AC133607) Mus musculus BAC clone RP23-153N7 from chromosome...    48   1.1    1
(AM455835) Vitis vinifera contig VV78X086503.8, whole genome...    48   1.1    1
(AM440743) Vitis vinifera contig VV78X173913.4, whole genome...    48   1.1    1
(AC209584) Solanum lycopersicum DNA sequence from clone LE_H...    48   1.1    1
(AC114741) Homo sapiens BAC clone RP11-62N21 from 4, complet...    48   1.1    1
(AC159493) Bos taurus clone CH240-74J19, WORKING DRAFT SEQUE...    48   1.1    1
(CU571339) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   1.1    1
(AC204189) Tupaia belangeri clone CH275-363F8, WORKING DRAFT...    48   1.1    1
(AC203896) Zea mays chromosome 3 clone CH201-105I7; ZMMBBc01...    48   1.1    1
(AC201054) Strongylocentrotus purpuratus clone R3-12N3, WORK...    48   1.1    1
(ET061261) MUGQ_CH252P357J11Sp6_CP670_040 CHORI-252 Vervet M...    48   1.1    1
(DX390044) AGAA-aaa39f06.g1 AGAA Anolis smaragdinus genomic,...    48   1.1    1
(AV807753) Arabidopsis thaliana cDNA clone:RAFL09-51-N10, 3'...    48   1.1    1
(BQ513936) EST621351 Generation of a set of potato cDNA clon...    48   1.1    1
(CP000848) Rickettsia rickettsii str. 'Sheila Smith', comple...    48   1.1    1
(CP000766) Rickettsia rickettsii str. Iowa, complete genome.       48   1.1    1
(CP000683) Rickettsia massiliae MTU5, complete genome.             48   1.1    1
(AE008571) Rickettsia conorii str. Malish 7, section 3 of 11...    48   1.1    1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    34   1.1    14
(BJ440883) Dictyostelium discoideum cDNA clone:ddv45d01, 3' ...    46   1.2    2
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442...    34   1.2    8
(AC007625) Genomic sequence of Homo sapiens clone 2314F2 fro...    40   1.3    7

>(BJ343731) Dictyostelium discoideum cDNA clone:dda17b04, 3' end,
            single read.
          Length = 773

 Score = 1489 bits (751), Expect = 0.0
 Identities = 751/751 (100%)
 Strand = Plus / Minus


Query: 630  tatccatactttttatcaaatacaattacatggtcatcaaatggtttacaattagcatgt 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  tatccatactttttatcaaatacaattacatggtcatcaaatggtttacaattagcatgt 714


Query: 690  ggttcaactaatcatagttcaattctattatgggatgttgtatctagagtaccaacattc 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  ggttcaactaatcatagttcaattctattatgggatgttgtatctagagtaccaacattc 654


Query: 750  ataccacgttataatggtaactcattattagtttggtctccaaaaaatgattatctttta 809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  ataccacgttataatggtaactcattattagtttggtctccaaaaaatgattatctttta 594


Query: 810  tcttgtggtggtaaaacttgtagaattttcgatatctcaaaatgggattacaataataaa 869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  tcttgtggtggtaaaacttgtagaattttcgatatctcaaaatgggattacaataataaa 534


Query: 870  gaatggccaatgttaacaaattatcaaacaggatcatggaatggaaaaggtgaatattta 929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533  gaatggccaatgttaacaaattatcaaacaggatcatggaatggaaaaggtgaatattta 474


Query: 930  gcagttgcaagtggtgatagaattcagtttattcaatgtataaatagagcatttgaatca 989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473  gcagttgcaagtggtgatagaattcagtttattcaatgtataaatagagcatttgaatca 414


Query: 990  ggtggtgaattaatgtatgttgagaaaacttcaacctatagattacaaaatgttggtggt 1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413  ggtggtgaattaatgtatgttgagaaaacttcaacctatagattacaaaatgttggtggt 354


Query: 1050 agtggtggtggttcaagtagtagtgaattatttttaggcggacatataaagaaaattgca 1109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353  agtggtggtggttcaagtagtagtgaattatttttaggcggacatataaagaaaattgca 294


Query: 1110 tggtcacctgatagtcaaagattggctgtcatcttttatttaaatagcaagagtagaaat 1169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293  tggtcacctgatagtcaaagattggctgtcatcttttatttaaatagcaagagtagaaat 234


Query: 1170 aatgatacttattgtgcaatctataaaattaaaacttatcctaaattttctgtaacacca 1229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233  aatgatacttattgtgcaatctataaaattaaaacttatcctaaattttctgtaacacca 174


Query: 1230 agaggtttcataaggtcaaaagatcaatcaattcaatcagtttcttttgtcccaaattat 1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173  agaggtttcataaggtcaaaagatcaatcaattcaatcagtttcttttgtcccaaattat 114


Query: 1290 aaaaaaggttctttattatcaattgcctacaatgatggaacaattaaatttttcccatta 1349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113  aaaaaaggttctttattatcaattgcctacaatgatggaacaattaaatttttcccatta 54


Query: 1350 ttatatcaatataaacaataagaaaataaag 1380
            |||||||||||||||||||||||||||||||
Sbjct: 53   ttatatcaatataaacaataagaaaataaag 23

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,150,245,600
Number of extensions: 141397767
Number of successful extensions: 12380710
Number of sequences better than 10.0: 297
Length of query: 1735
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1711
Effective length of database: 97,308,875,965
Effective search space: 166495486776115
Effective search space used: 166495486776115
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.24
Homology vs Protein 
Query= Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Contig-U08780-1Q.Seq.d
         (1735 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC115581_9(AC115581|pid:none) Dictyostelium discoideum chromosom...   491   0.0
(Q7KWY4) RecName: Full=Uncharacterized protein DDB_G0276777;  &A...   138   5e-31
BC077988_1(BC077988|pid:none) Xenopus laevis achalasia, adrenoco...    92   4e-20
AK088247_1(AK088247|pid:none) Mus musculus 2 days neonate thymus...    84   1e-17
BC067671_1(BC067671|pid:none) Danio rerio achalasia, adrenocorti...    82   4e-17
AY891872_1(AY891872|pid:none) Synthetic construct Homo sapiens c...    79   2e-16
AK222509_1(AK222509|pid:none) Homo sapiens mRNA for achalasia, a...    79   2e-16
(Q9NRG9) RecName: Full=Aladin; AltName: Full=Adracalin;  &AF2260...    79   2e-16
AK000833_1(AK000833|pid:none) Homo sapiens cDNA FLJ20826 fis, cl...    79   2e-16
BC120418_1(BC120418|pid:none) Bos taurus achalasia, adrenocortic...    80   3e-16
EF147038_1(EF147038|pid:none) Populus trichocarpa clone WS01226_...    76   3e-12
BT067274_1(BT067274|pid:none) Zea mays full-length cDNA clone ZM...    75   6e-12
AK241371_1(AK241371|pid:none) Oryza sativa Japonica Group cDNA, ...    72   5e-11
AK087134_1(AK087134|pid:none) Mus musculus 0 day neonate lung cD...    60   2e-07
CP001291_3117(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    50   3e-04
AE014298_1372(AE014298|pid:none) Drosophila melanogaster chromos...    49   6e-04
(Q28D01) RecName: Full=WD repeat-containing protein 26;                45   0.008
CR855782_1(CR855782|pid:none) Xenopus tropicalis finished cDNA, ...    45   0.008
BC130197_1(BC130197|pid:none) Xenopus laevis hypothetical protei...    45   0.008
BC031471_1(BC031471|pid:none) Homo sapiens WD repeat domain 26, ...    44   0.018
AB209887_1(AB209887|pid:none) Homo sapiens mRNA for WD repeat do...    44   0.018
BC063817_1(BC063817|pid:none) Homo sapiens WD repeat domain 26, ...    44   0.018
AK024669_1(AK024669|pid:none) Homo sapiens cDNA: FLJ21016 fis, c...    44   0.018
BC109897_1(BC109897|pid:none) Bos taurus WD repeat domain 26, mR...    44   0.018
AK299230_1(AK299230|pid:none) Homo sapiens cDNA FLJ56418 complet...    44   0.018
BC058601_1(BC058601|pid:none) Mus musculus WD repeat domain 26, ...    44   0.024
AK075743_1(AK075743|pid:none) Mus musculus adult female placenta...    44   0.024
BC160602_1(BC160602|pid:none) Danio rerio si:ch211-153j24.6, mRN...    43   0.031
(Q5SP67) RecName: Full=WD repeat-containing protein 26;  &AL9294...    43   0.031
AP007151_34(AP007151|pid:none) Aspergillus oryzae RIB40 genomic ...    43   0.041
T14745(T14745)hypothetical protein DKFZp586G1624.1 - human (frag...    42   0.053
CP000828_2955(CP000828|pid:none) Acaryochloris marina MBIC11017,...    41   0.12
CP001325_564(CP001325|pid:none) Micromonas sp. RCC299 chromosome...    41   0.16
(P78972) RecName: Full=WD repeat-containing protein slp1;  &AL12...    40   0.35
(Q9USR0) RecName: Full=Uncharacterized WD repeat-containing prot...    39   0.59
(Q86HX1) RecName: Full=Protein HIRA;  &AC114263_7(AC114263|pid:n...    39   0.59
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    39   0.77
X59428_1(X59428|pid:none) S.cerevisiae cdc20 gene.                     39   0.77
(P26309) RecName: Full=APC/C activator protein CDC20; AltName: F...    39   0.77
D16506_1(D16506|pid:none) Saccharomyces cerevisiae CDC20 and CAT...    39   0.77
BT016167_1(BT016167|pid:none) Drosophila melanogaster AT04626 fu...    38   1.0
U21322_7(U21322|pid:none) Caenorhabditis elegans cosmid K10D2, c...    38   1.0
AY069414_1(AY069414|pid:none) Drosophila melanogaster LD11036 fu...    38   1.0
(Q09589) RecName: Full=Protein HIRA homolog;  &U21322_6(U21322|p...    38   1.0
A59246(A59246;JE0283) HIRA protein - fruit fly (Drosophila melan...    37   1.7
AB436973_3(AB436973|pid:none) Staphylococcus aureus coa genes fo...    37   1.7
AY225090_1(AY225090|pid:none) Staphylococcus aureus strain Tager...    37   1.7
AB489890_1(AB489890|pid:none) Staphylococcus aureus coa gene for...    37   1.7
AF071881_1(AF071881|pid:none) Drosophila melanogaster Hira isofo...    37   2.9
AB436972_3(AB436972|pid:none) Staphylococcus aureus coa genes fo...    37   2.9
AJ311974_1(AJ311974|pid:none) Staphylococcus aureus partial coa ...    37   2.9
AF031081_1(AF031081|pid:none) Drosophila melanogaster HIRA homol...    36   5.0
CP001331_216(CP001331|pid:none) Micromonas sp. RCC299 chromosome...    36   5.0
CP000807_91(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ...    36   5.0
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi...    35   6.5
CP001577_363(CP001577|pid:none) Micromonas sp. RCC299 chromosome...    35   6.5

>AC115581_9(AC115581|pid:none) Dictyostelium discoideum chromosome 2
            map complement(3527391-3470188) strain AX4, complete
            sequence.
          Length = 471

 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 236/246 (95%), Positives = 236/246 (95%)
 Frame = +3

Query: 630  YPYFLSNTITWSSNGLQLACGSTNHSSILLWDVVSRVPTFIPRYNGNSLLVWSPKNDYLL 809
            YPYFLSNTITWSSNGLQLACGSTNHSSILLWDVVSRVPTFIPRYNGNSLLVWSPKNDYLL
Sbjct: 226  YPYFLSNTITWSSNGLQLACGSTNHSSILLWDVVSRVPTFIPRYNGNSLLVWSPKNDYLL 285

Query: 810  SCGGKTCRIFDISKWDYNNKEWPMLTNYQTGSWNGKGEYLAVASGDRIQFIQCINRAFES 989
            SCGGKTCRIFDISKWDYNNKEWPMLTNYQTGSWNGKGEYLAVASGDRIQFIQCINRAFES
Sbjct: 286  SCGGKTCRIFDISKWDYNNKEWPMLTNYQTGSWNGKGEYLAVASGDRIQFIQCINRAFES 345

Query: 990  GGELMYVEKTSTYRLQNVXXXXXXXXXXELFLGGHIKKIAWSPDSQRLAVIFYLNSKSRN 1169
            GGELMYVEKTSTYRLQNV          ELFLGGHIKKIAWSPDSQRLAVIFYLNSKSRN
Sbjct: 346  GGELMYVEKTSTYRLQNVGGSGGGSSSSELFLGGHIKKIAWSPDSQRLAVIFYLNSKSRN 405

Query: 1170 NDTYCAIYKIKTYPKFSVTPRGFIRSKDQSIQSVSFVPNYKKGSLLSIAYNDGTIKFFPL 1349
            NDTYCAIYKIKTYPKFSVTPRGFIRSKDQSIQSVSFVPNYKKGSLLSIAYNDGTIKFFPL
Sbjct: 406  NDTYCAIYKIKTYPKFSVTPRGFIRSKDQSIQSVSFVPNYKKGSLLSIAYNDGTIKFFPL 465

Query: 1350 LYQYKQ 1367
            LYQYKQ
Sbjct: 466  LYQYKQ 471

 Score =  349 bits (896), Expect(2) = 0.0
 Identities = 173/194 (89%), Positives = 174/194 (89%)
 Frame = +2

Query: 62  MIEEHNCFEEFINTAAIGEQQVYGEYKSKLDSFTDESKLPYELLLERKNLVELKISDEEY 241
           MIEEHNCFEEFINTAAIGEQQVYGEYKSKLDSFTDESKLPYELLLERKNLVELKISDEEY
Sbjct: 1   MIEEHNCFEEFINTAAIGEQQVYGEYKSKLDSFTDESKLPYELLLERKNLVELKISDEEY 60

Query: 242 KKSESALKTPNPTLLQKFQINFYQTIESINQVFKPXXXXXXXXXXXXXXXEDDSLQNKKI 421
           KKSESALKTPNPTLLQKFQINFYQTIESINQVFKP               EDDSLQNKKI
Sbjct: 61  KKSESALKTPNPTLLQKFQINFYQTIESINQVFKPSSSSSNQSSSSSSSNEDDSLQNKKI 120

Query: 422 KVMSWHPQHRLLAVCNKNDVIYIYYFPNQDMYGMGNVRPLTLWFELQSKVYDIQWKPFLP 601
           KVMSWHPQHRLLAVCNKNDVIYIYYFPNQDMYGMGNVRPLTLWFELQSKVYDIQWKPFLP
Sbjct: 121 KVMSWHPQHRLLAVCNKNDVIYIYYFPNQDMYGMGNVRPLTLWFELQSKVYDIQWKPFLP 180

Query: 602 YTLAVAXXXXSILF 643
           YTLAVA     IL+
Sbjct: 181 YTLAVACENGIILW 194

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,332,632,038
Number of extensions: 42786889
Number of successful extensions: 89844
Number of sequences better than 10.0: 56
Number of HSP's gapped: 89737
Number of HSP's successfully gapped: 72
Length of query: 578
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 444
Effective length of database: 611,592,589
Effective search space: 271547109516
Effective search space used: 271547109516
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.63  gvh: 0.36  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 40.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for Contig-U08780-1 is nuc
VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0