Contig-U11847-1
Contig ID Contig-U11847-1
Contig update 2002.12.18
Contig sequence
>Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Contig-U11847-1Q.Seq.d
AGTAGGATTTTGTTCATCATAGATATCTCGTTATGCTGTTTAACTTCTAG
CATTATACACATTCAAAAACATTACCAATTATAGTCGAAAAAAGATAATA
ACCAAATATTAATTAAATTATAAGATTATAAAAAAAATAAAAAAATAAAA
AATAATAAATAAAAAAAAATATGATAGAGACAAGTTTTATAAAATGGATA
AATTCATTTAAAGATTTATCTAACTCTATTGAAGATTTAAAAGAGTTATC
AAATGGTACTATATTTAATGAAATTTGTTGCCAAATTGCACCAAAATATT
TTGATATAGATTCATTAAGAAAAGATGGATTAGATAATTGGATATTTAGA
GAAGAGAATATTAAAAATATAGTAGAAAGAGTTGATGAATTTTATATAGA
AGAGATGGGATTAAACGATCAAATATCATCCATTAATTGTGAAGAGATTG
CAAACGAAAATATCGATGAAATTATATTATTGATTGAAGCAATACTTGGA
ATGGCAATGGAATCTGAAAATAATGAAGCTGTAATTGAAAATATTTTATC
TTTAGATCAAGATACTCAAAATGATTTAATGGTTGTTGTTGCAAAGATTC
AACAATCACATCAACCAAATACAGTAGATAATAGTAAATCATTTGATAAA
GATGGATCAATTTTATCACAATCACCAAGTCAAAGTAATAATAGTATTAG
TAATAATAATAATAATAATAATATAGATAGTAG----------GTTCATT
ACGTGATGAAATTGATATTTTAAGAGAGAAAGCTGCAAATGCTGAAGCAA
CTGAAGAGAAATTAAAAAAACATCAAAAGAAAATCGAAGAAATTGGCGAT
CTAAAAAAGAAAATCAAGGAACTTGAAGATCAAAATGATAGTTACATTCA
ACAAACTTTGGATCTTGAAGAACAACTCTCAAAGAATAACACCTATAGAA
CTCAAGCTGACTCTGGTAAACAACAAATCTCCTCACTAAAGATTGAATTG
GCAAAATTGGAATTATCTTTGAAATCCATTAAAGAGGATCGTGATAAATT
ATCTGAATCTTTAAATACCGTAGAGTTGGAACGTGATAGTTTACAATCTC
AAGTTACTAACCTCAGAAATACAATCGATAATCAACAACAAGAATATGAA
ACCAAATTCGTTGATCTTCAATCTTCAATTAGTCTCAATAGTGGTGGTAG
TGGTGGTTTAGGTGATGAAGTCATTGATGGTTCAACCAAAGAAAGAATAG
CTCGTTTAGAAAGAGATAACAAACGTTTAAAAGAAGTCGCTGAAAAAGCT
TCTGAATTAGAAAATCAATTAGAAGATGCCAATCAATCAAAAGAATTATT
AACAATTCAAATTAAACAATTAGAAGAACAAAAACAACAATCAAATAATA
CTAATAATAATAATAATAATAATAATATGGTCGATTCATCTGAAATTGAA
TCACTAAAACAACAATTAAAAGAAAAAGAAAAAGAAATTTCAACATTAAA
GAGAAAACTCGAGGAATCTAATCTTAGTTTGGATGAAAATAGGAAACAAT
TGGTCGAATTATCACAAAGACCAACCACTCAATCACCAGGTGATATTGAA
AAACTTGAAAATTACGAAAATCTTCTCAAGGAAAATGATGGTTTAGAGGT
TCGTTTAAGAGCTGCTCGTAACATCATTAAAGATCTTAGAGAAAAACATA
AATCTTACTCAAATCAAGAGACTCAATTGGCCACCAAAGATGAAGTCATC
ACCAAATTGGAAGGTTTGGTCAAAAAGAAGACTGATATCAACGAAGATTT
AAGAAAACAACTCGAAGAAGGTAGAGAAGAATCTCAAAGAGAAATTAATT
TAATGCTTTCAGCTTTCTTAAAGATTGGTTTAGAAATGGAACAAGTTAAA
ATTCAAAATATTTCAAGTTCAAAAGAACCAAGATCATTTTTAAATAAAAA
AAGAGCAGATTAAAGAATTTATAAATAATAATAAATAATGACATAATAAT
CATACACTTTTAGAGTAGTAATA

Gap gap included
Contig length 2013
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 1799711
End point 1801725
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 7
Link to clone list U11847
List of clone(s)

est1=CHM408F,1,580
est2=VHI376F,4,645
est3=VSI610F,39,558
est4=VSJ354F,148,734
est5=VSI610Z,735,1429
est6=CHM408Z,1303,2015
est7=VSJ354Z,1455,1986
Translated Amino Acid sequence
*dfvhhrylvmlfnf*hythsktlpiivekr**pnin*iirl*kk*knkk**IKKNMIET
SFIKWINSFKDLSNSIEDLKELSNGTIFNEICCQIAPKYFDIDSLRKDGLDNWIFREENI
KNIVERVDEFYIEEMGLNDQISSINCEEIANENIDEIILLIEAILGMAMESENNEAVIEN
ILSLDQDTQNDLMVVVAKIQQSHQPNTVDNSKSFDKDGSILSQSPSQSNNSISNNNNNNN
IDS---

---SLRDEIDILREKAANAEATEEKLKKHQKKIEEIGDLKKKIKELEDQNDSYIQQTLDL
EEQLSKNNTYRTQADSGKQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDSLQ
SQVTNLRNTIDNQQQEYETKFVDLQSSISLNSGGSGGLGDEVIDGSTKERIARLERDNKR
LKEVAEKASELENQLEDANQSKELLTIQIKQLEEQKQQSNNTNNNNNNNNMVDSSEIESL
KQQLKEKEKEISTLKRKLEESNLSLDENRKQLVELSQRPTTQSPGDIEKLENYENLLKEN
DGLEVRLRAARNIIKDLREKHKSYSNQETQLATKDEVITKLEGLVKKKTDINEDLRKQLE
EGREESQREINLMLSAFLKIGLEMEQVKIQNISSSKEPRSFLNKKRAD*riyk***imt*
*sytfrvvi


Translated Amino Acid sequence (All Frames)
Frame A:
srilfiidislccltssiihiqkhyql*skkdnnqilikl*dykknkkiknnk*kki**r
qvl*ng*ihlkiyltllki*ksyqmvlylmkfvaklhqnili*ih*ekmd*iigylekri
lki**kelmnfi*krwd*tikyhplivkrlqtkismklyy*lkqylewqwnlkimkl*lk
ifyl*ikilkmi*wlllqrfnnhinqiq*iivnhlikmdqfyhnhqvkviivlviiiiii
i*iv---

---vhyvmklif*erklqmlkqlkrn*knikrkskklai*krksrnlkikmivtfnklwi
lknnsqritpielkltlvnnksph*rlnwqnwnyl*nplkrivinylnl*ip*swnvivy
nlklltseiqsiinnknmkpnslifnlqlvsivvvvvv*vmkslmvqpkke*lv*keitn
v*kkslkklln*kin*kmpinqkny*qfklnn*knknnnqiiliiiiiiiiwsihlklnh
*nnn*kkkkkkfqh*rensrnlilvwmkignnwsnyhkdqplnhqvilknlkitkifsrk
mmv*rfv*ellvtslkilekninltqikrlnwppkmksspnwkvwskrrlistki*enns
kkveknlkekli*cfqls*rlv*kwnklkfkifqvqknqdhf*ikkeqikefinnnk**h
nnhtlle**

Frame B:
vgfcss*isryav*llalytfknitnysrkkiitky*lnykiikkikk*kiinkkkydrd
kfykmdkfi*rfi*ly*rfkrvikwyyi**nllpnctkif*yrfikkrwir*ldi*rrey
*kysrks**ilyrrdgikrsniih*l*rdckrkyr*nyiid*sntwngngi*k**scn*k
yfifrsrysk*fngccckdstitstkysr***ii**rwinfititksk***y********
yr**---

---fit**n*yfkresckc*sn*reikktskenrrnwrskkenqgt*rsk**lhstnfgs
*rttlke*hl*nss*lw*ttnlltkd*igkigiifeih*rgs**ii*ifkyrrvgt**ft
issy*pqkynr*sttri*nqir*ssifn*sq*ww*wwfr**sh*wfnqrknssfrkr*qt
fkrsr*ksf*irksirrcqsikriinnsn*tirrtkttik*y********ygrfi*n*it
kttikrkrkrnfnikektrgi*s*fg*k*etigriitktnhsitr*y*kt*klrkssqgk
*wfrgsfkscs*hh*rs*rkt*illksrdsighqr*shhqigrfgqked*yqrrfkkttr
rr*rriskrn*fnafsflkdwfrngts*nskyfkfkrtkiifk*kksrlknl*iiinndi
iiihf*ssn

Frame C:
*dfvhhrylvmlfnf*hythsktlpiivekr**pnin*iirl*kk*knkk**IKKNMIET
SFIKWINSFKDLSNSIEDLKELSNGTIFNEICCQIAPKYFDIDSLRKDGLDNWIFREENI
KNIVERVDEFYIEEMGLNDQISSINCEEIANENIDEIILLIEAILGMAMESENNEAVIEN
ILSLDQDTQNDLMVVVAKIQQSHQPNTVDNSKSFDKDGSILSQSPSQSNNSISNNNNNNN
IDS---

---SLRDEIDILREKAANAEATEEKLKKHQKKIEEIGDLKKKIKELEDQNDSYIQQTLDL
EEQLSKNNTYRTQADSGKQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDSLQ
SQVTNLRNTIDNQQQEYETKFVDLQSSISLNSGGSGGLGDEVIDGSTKERIARLERDNKR
LKEVAEKASELENQLEDANQSKELLTIQIKQLEEQKQQSNNTNNNNNNNNMVDSSEIESL
KQQLKEKEKEISTLKRKLEESNLSLDENRKQLVELSQRPTTQSPGDIEKLENYENLLKEN
DGLEVRLRAARNIIKDLREKHKSYSNQETQLATKDEVITKLEGLVKKKTDINEDLRKQLE
EGREESQREINLMLSAFLKIGLEMEQVKIQNISSSKEPRSFLNKKRAD*riyk***imt*
*sytfrvvi

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11847-1 (Contig-U11847-1Q)
/CSM_Contig/Contig-U11847-1Q.Seq.d
(2023 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Conti... 1019 0.0
Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U13927-1 (Contig-U13927-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U12983-1 (Contig-U12983-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U12707-1 (Contig-U12707-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U11551-1 (Contig-U11551-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U09049-1 (Contig-U09049-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U12753-1 (Contig-U12753-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U11427-1 (Contig-U11427-1Q) /CSM_Contig/Conti... 38 0.036

>Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Contig-U11847-1Q.Seq.d
Length = 2023

Score = 1019 bits (514), Expect = 0.0
Identities = 514/514 (100%)
Strand = Plus / Plus


Query: 170 tatgatagagacaagttttataaaatggataaattcatttaaagatttatctaactctat 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tatgatagagacaagttttataaaatggataaattcatttaaagatttatctaactctat 229


Query: 230 tgaagatttaaaagagttatcaaatggtactatatttaatgaaatttgttgccaaattgc 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgaagatttaaaagagttatcaaatggtactatatttaatgaaatttgttgccaaattgc 289


Query: 290 accaaaatattttgatatagattcattaagaaaagatggattagataattggatatttag 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 accaaaatattttgatatagattcattaagaaaagatggattagataattggatatttag 349


Query: 350 agaagagaatattaaaaatatagtagaaagagttgatgaattttatatagaagagatggg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaagagaatattaaaaatatagtagaaagagttgatgaattttatatagaagagatggg 409


Query: 410 attaaacgatcaaatatcatccattaattgtgaagagattgcaaacgaaaatatcgatga 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attaaacgatcaaatatcatccattaattgtgaagagattgcaaacgaaaatatcgatga 469


Query: 470 aattatattattgattgaagcaatacttggaatggcaatggaatctgaaaataatgaagc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aattatattattgattgaagcaatacttggaatggcaatggaatctgaaaataatgaagc 529


Query: 530 tgtaattgaaaatattttatctttagatcaagatactcaaaatgatttaatggttgttgt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tgtaattgaaaatattttatctttagatcaagatactcaaaatgatttaatggttgttgt 589


Query: 590 tgcaaagattcaacaatcacatcaaccaaatacagtagataatagtaaatcatttgataa 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgcaaagattcaacaatcacatcaaccaaatacagtagataatagtaaatcatttgataa 649


Query: 650 agatggatcaattttatcacaatcaccaagtcaa 683
||||||||||||||||||||||||||||||||||
Sbjct: 650 agatggatcaattttatcacaatcaccaagtcaa 683


Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus


Query: 864 tcaaggaacttgaagatcaaaatgatagttacattcaacaaactttggatcttgaagaac 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tcaaggaacttgaagatcaaaatgatagttacattcaacaaactttggatcttgaagaac 923


Query: 924 aactctcaaagaataacacctatagaactcaagctgactctggtaaacaacaaatctcct 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aactctcaaagaataacacctatagaactcaagctgactctggtaaacaacaaatctcct 983


Query: 984 cactaaagattgaattggcaaaattggaattatctttgaaatccattaaagaggatcgtg 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 cactaaagattgaattggcaaaattggaattatctttgaaatccattaaagaggatcgtg 1043


Query: 1044 ataaattatctgaatctttaaataccgtagagttggaacgtgatagtttacaatctcaag 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ataaattatctgaatctttaaataccgtagagttggaacgtgatagtttacaatctcaag 1103


Query: 1104 ttactaacctcagaaatacaatcgataatcaacaacaagaatatgaaaccaaattcgttg 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ttactaacctcagaaatacaatcgataatcaacaacaagaatatgaaaccaaattcgttg 1163


Query: 1164 atcttcaatcttcaattagtctcaatagtggtggtagtggtggtttaggtgatgaagtca 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 atcttcaatcttcaattagtctcaatagtggtggtagtggtggtttaggtgatgaagtca 1223


Query: 1224 ttgatggttcaaccaaagaaagaatagctcgtttagaaagagataacaaacgtttaaaag 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 ttgatggttcaaccaaagaaagaatagctcgtttagaaagagataacaaacgtttaaaag 1283


Query: 1284 aagtcgctgaaaaagcttctgaattagaaaatcaattagaagatgccaatcaatcaaaag 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 aagtcgctgaaaaagcttctgaattagaaaatcaattagaagatgccaatcaatcaaaag 1343


Query: 1344 aattattaa 1352
|||||||||
Sbjct: 1344 aattattaa 1352


Score = 876 bits (442), Expect = 0.0
Identities = 456/463 (98%)
Strand = Plus / Plus


Query: 1508 ctcgaggaatctaatcttagtttggatgaaaataggaaacaattggtcgaattatcacaa 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 ctcgaggaatctaatcttagtttggatgaaaataggaaacaattggtcgaattatcacaa 1567


Query: 1568 agaccaaccactcaatcaccaggtgatattgaaaaacttgaaaattacgaaaatcttctc 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 agaccaaccactcaatcaccaggtgatattgaaaaacttgaaaattacgaaaatcttctc 1627


Query: 1628 aaggaaaatgatggtttagaggttcgtttaagagctgctcgtaacatcattaaagatctt 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 aaggaaaatgatggtttagaggttcgtttaagagctgctcgtaacatcattaaagatctt 1687


Query: 1688 agagaaaaacataaatcttactcaaatcaagagactcaattggccaccaaagatgaagtc 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 agagaaaaacataaatcttactcaaatcaagagactcaattggccaccaaagatgaagtc 1747


Query: 1748 atcaccaaattggaaggtttggtcaaaaagaagactgatatcaacgaagatttaagaaaa 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 atcaccaaattggaaggtttggtcaaaaagaagactgatatcaacgaagatttaagaaaa 1807


Query: 1808 caactcgaagaaggtagagaagaatctcaaagagaaattaatttaatgctttcagctttc 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 caactcgaagaaggtagagaagaatctcaaagagaaattaatttaatgctttcagctttc 1867


Query: 1868 ttaaagattggtttagaaatggaacaagttaaaattcaaaatatttcaagttcaaaagaa 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 ttaaagattggtttagaaatggaacaagttaaaattcaaaatatttcaagttcaaaagaa 1927


Query: 1928 ccaagatcatttttaaatnnnnnnngagcagattaaagaattt 1970
|||||||||||||||||| ||||||||||||||||||
Sbjct: 1928 ccaagatcatttttaaataaaaaaagagcagattaaagaattt 1970


Score = 256 bits (129), Expect = 8e-68
Identities = 129/129 (100%)
Strand = Plus / Plus


Query: 1 agtaggattttgttcatcatagatatctcgttatgctgtttaacttctagcattatacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtaggattttgttcatcatagatatctcgttatgctgtttaacttctagcattatacac 60


Query: 61 attcaaaaacattaccaattatagtcgaaaaaagataataaccaaatattaattaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcaaaaacattaccaattatagtcgaaaaaagataataaccaaatattaattaaatta 120


Query: 121 taagattat 129
|||||||||
Sbjct: 121 taagattat 129


Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus


Query: 744 gttcattacgtgatgaaattgatattttaagagagaaagctgcaaatgctgaagcaactg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttcattacgtgatgaaattgatattttaagagagaaagctgcaaatgctgaagcaactg 803


Query: 804 aagag 808
|||||
Sbjct: 804 aagag 808


Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 1428 tggtcgattcatctgaaattgaatcac 1454
|||||||||||||||||||||||||||
Sbjct: 1428 tggtcgattcatctgaaattgaatcac 1454


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 2001 catacacttttagagtagtaata 2023
|||||||||||||||||||||||
Sbjct: 2001 catacacttttagagtagtaata 2023


>Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Contig-U03323-1Q.Seq.d
Length = 533

Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus


Query: 1185 tcaatagtggtggtagtggtggtttaggtga 1215
|||||| ||||||| ||||||||||||||||
Sbjct: 422 tcaataatggtggtggtggtggtttaggtga 452


>Contig-U13927-1 (Contig-U13927-1Q) /CSM_Contig/Contig-U13927-1Q.Seq.d
Length = 2095

Score = 40.1 bits (20), Expect = 0.009
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 308 agattcattaagaaaagatggatt 331
||||||||||| ||||||||||||
Sbjct: 669 agattcattaaaaaaagatggatt 692


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,539
Number of Sequences: 6905
Number of extensions: 28539
Number of successful extensions: 3500
Number of sequences better than 10.0: 394
length of query: 2023
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2007
effective length of database: 5,564,391
effective search space: 11167732737
effective search space used: 11167732737
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Contig-U11847-1Q.Seq.d
(2023 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU269801) Dictyostelium discoideum vegetative cDNA clone:VS... 1023 0.0 1
(BJ423028) Dictyostelium discoideum cDNA clone:ddv47h19, 5' ... 944 0.0 2
(BJ368319) Dictyostelium discoideum cDNA clone:ddc46p02, 5' ... 815 0.0 2
(AU268959) Dictyostelium discoideum vegetative cDNA clone:VS... 878 0.0 2
(BJ382888) Dictyostelium discoideum cDNA clone:ddc46p02, 3' ... 868 0.0 4
(AU269802) Dictyostelium discoideum vegetative cDNA clone:VS... 878 0.0 2
(AU268958) Dictyostelium discoideum vegetative cDNA clone:VS... 771 0.0 2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.067 21
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 34 0.087 22
(BD061520) Genome DNA of symbiotic bacteria of aphid. 36 0.12 18
(AR409405) Sequence 1 from patent US 6632935. 36 0.12 18
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 36 0.12 18
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 34 0.31 21
(AC013725) Homo sapiens BAC clone RP11-323F5 from 4, complet... 50 0.33 1
(DW421366) HHAGE021096 Human liver regeneration after partia... 50 0.33 1
(DB344942) Homo sapiens cDNA clone THYMU3006201, 3' end, mRN... 50 0.33 1
(AI859325) wm10a06.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone I... 50 0.33 1
(BU730057) UI-E-CK1-afj-c-21-0-UI.s1 UI-E-CK1 Homo sapiens c... 50 0.33 1
(BQ638565) hd25a06.y1 Human Retina cDNA (Un-normalized, unam... 50 0.33 1
(DU478912) 1098415811073 CHORI-243 Ovis aries genomic clone ... 46 0.63 2
(EL527625) EST_omor_eva_6778 omoreva mixed_tissue Osmerus mo... 44 0.63 2
(EL527624) EST_omor_eva_6777 omoreva mixed_tissue Osmerus mo... 44 0.63 2
(AC025153) Homo sapiens chromosome 12 clone RP11-289I2, WORK... 38 0.70 2
(AC024897) Homo sapiens 3 BAC RP11-505J9 (Roswell Park Cance... 38 0.70 2
(AC024991) Homo sapiens chromosome 3 clone RP11-177B6 map 3,... 38 0.71 2
(AC093000) Homo sapiens chromosome 3q clone RP11-177B6, WORK... 38 0.71 2
(AC211037) Solanum lycopersicum chromosome 6 clone C06HBa006... 36 0.75 2
(CU459061) S.lycopersicum DNA sequence *** SEQUENCING IN PRO... 36 0.83 7
(AC216648) Solanum lycopersicum chromosome 6 clone C06HBa009... 36 0.88 6
(AL161537) Arabidopsis thaliana DNA chromosome 4, contig fra... 42 1.1 9
(EJ201907) 1092344308493 Global-Ocean-Sampling_GS-27-01-01-1... 32 1.2 5
(DJ134455) Method for identification of useful proteins deri... 48 1.3 1
(ET778412) CHO_OF589xo13f1.ab1 CHO_OF Nicotiana tabacum geno... 48 1.3 1
(EJ845991) 1093017856074 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.3 1
(EJ740627) 1092962013998 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.3 1
(EJ654724) 1092955002074 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.3 1
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 1.4 13
(Z79598) Caenorhabditis elegans Cosmid C44H4. 38 1.5 5
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 34 1.7 15
(EJ044249) 1095454111598 Global-Ocean-Sampling_GS-26-01-01-1... 46 2.0 2
(CZ531956) SRAA-aac75g11.g1 Strongyloides ratti whole genome... 40 2.0 3
(CC542865) CH240_424A16.TARBAC13P2 CHORI-240 Bos taurus geno... 44 2.1 2
(EK243135) 1095460241681 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.4 2
(EJ031662) 1095454048797 Global-Ocean-Sampling_GS-26-01-01-1... 46 2.5 2
(EG982753) GLL093_H04_009 Cyamopsis tetragonoloba (L.) Taub ... 34 3.6 2
(AE017308) Mycoplasma mobile 163K complete genome. 34 4.1 17
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 4.3 20
(AC208086) Populus trichocarpa clone JGIACSB05-D10, complete... 36 5.2 6
(AC226016) Solanum lycopersicum chromosome 6 clone C06SLm006... 32 5.2 10
(BX248402) Zebrafish DNA sequence from clone CH211-226P14 in... 46 5.2 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 46 5.2 1
(AC160916) Rhinolophus ferrumequinum clone VMRC7-62G19, WORK... 46 5.2 1
(AC160794) Bos taurus clone CH240-86I11, WORKING DRAFT SEQUE... 46 5.2 1
(AC157306) Bos taurus clone CH240-71E17, WORKING DRAFT SEQUE... 46 5.2 1
(AC156784) Rhinolophus ferrumequinum clone VMRC7-400J24, WOR... 46 5.2 1
(AC152575) Bos taurus clone CH240-14A22, *** SEQUENCING IN P... 46 5.2 1
(AC128057) Rattus norvegicus clone CH230-17I11, WORKING DRAF... 46 5.2 1
(AC125549) Rattus norvegicus clone CH230-7B11, *** SEQUENCIN... 46 5.2 1
(AC115507) Rattus norvegicus clone CH230-330C22, WORKING DRA... 46 5.2 1
(AC111633) Rattus norvegicus clone CH230-96P2, WORKING DRAFT... 46 5.2 1
(CU104737) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.2 1
(AC222259) Bos taurus clone CH240-413H19, WORKING DRAFT SEQU... 46 5.2 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 46 5.2 1
(AC178250) Strongylocentrotus purpuratus clone R3-3086L3, WO... 46 5.2 1
(AC175424) Bos taurus clone CH240-292D9, WORKING DRAFT SEQUE... 46 5.2 1
(AC169552) Bos taurus clone CH240-225O21, WORKING DRAFT SEQU... 46 5.2 1
(AC162985) Bos taurus clone CH240-123I20, WORKING DRAFT SEQU... 46 5.2 1
(ER602811) 1093016254909 Global-Ocean-Sampling_GS-36-01-01-2... 46 5.2 1
(EK172535) 1095458082143 Global-Ocean-Sampling_GS-31-01-01-1... 46 5.2 1
(EJ969739) 1093022072398 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.2 1
(EJ937594) 1093018847174 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.2 1
(EJ925133) 1093018778790 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.2 1
(EJ491186) 1095403540909 Global-Ocean-Sampling_GS-28-01-01-1... 46 5.2 1
(ED836175) Ynhw36189 HW-YUBAC Bos taurus genomic clone HW-YU... 46 5.2 1
(BH793764) ME_MBa0001M05f Manihot esculenta Manihot esculent... 46 5.2 1
(AU271392) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 46 5.2 1
(CT843825) Oryza sativa Indica Group EST sequence:CONTIG8104. 46 5.2 1
(AM053458) Epidinium ecaudatum EST, clone Epi_F09. 46 5.2 1
(AW872928) hq20a09.x1 NCI_CGAP_Adr1 Homo sapiens cDNA clone ... 46 5.2 1
(FC053998) CATU8100.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC052915) CATU7328.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC051335) CATU6341.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC049160) CATU4955.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC048852) CATU4750.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC048839) CATU4741.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC048157) CATU4317.fwd CATU Aureococcus anophagefferens Sin... 46 5.2 1
(FC046083) CATU40726.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC043948) CATU39082.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC043061) CATU38533.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC040664) CATU37061.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC039172) CATU36145.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC039124) CATU36117.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC034166) CATU31986.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC032902) CATU30831.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC029782) CATU28931.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC022893) CATU23783.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC018290) CATU20254.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC016802) CATU18695.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC015655) CATU17958.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1
(FC013254) CATU16376.fwd CATU Aureococcus anophagefferens Si... 46 5.2 1

>(AU269801) Dictyostelium discoideum vegetative cDNA clone:VSJ354,
5' end single read.
Length = 587

Score = 1023 bits (516), Expect = 0.0
Identities = 516/516 (100%)
Strand = Plus / Plus


Query: 170 tatgatagagacaagttttataaaatggataaattcatttaaagatttatctaactctat 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 tatgatagagacaagttttataaaatggataaattcatttaaagatttatctaactctat 82


Query: 230 tgaagatttaaaagagttatcaaatggtactatatttaatgaaatttgttgccaaattgc 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tgaagatttaaaagagttatcaaatggtactatatttaatgaaatttgttgccaaattgc 142


Query: 290 accaaaatattttgatatagattcattaagaaaagatggattagataattggatatttag 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 accaaaatattttgatatagattcattaagaaaagatggattagataattggatatttag 202


Query: 350 agaagagaatattaaaaatatagtagaaagagttgatgaattttatatagaagagatggg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agaagagaatattaaaaatatagtagaaagagttgatgaattttatatagaagagatggg 262


Query: 410 attaaacgatcaaatatcatccattaattgtgaagagattgcaaacgaaaatatcgatga 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attaaacgatcaaatatcatccattaattgtgaagagattgcaaacgaaaatatcgatga 322


Query: 470 aattatattattgattgaagcaatacttggaatggcaatggaatctgaaaataatgaagc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aattatattattgattgaagcaatacttggaatggcaatggaatctgaaaataatgaagc 382


Query: 530 tgtaattgaaaatattttatctttagatcaagatactcaaaatgatttaatggttgttgt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtaattgaaaatattttatctttagatcaagatactcaaaatgatttaatggttgttgt 442


Query: 590 tgcaaagattcaacaatcacatcaaccaaatacagtagataatagtaaatcatttgataa 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgcaaagattcaacaatcacatcaaccaaatacagtagataatagtaaatcatttgataa 502


Query: 650 agatggatcaattttatcacaatcaccaagtcaaag 685
||||||||||||||||||||||||||||||||||||
Sbjct: 503 agatggatcaattttatcacaatcaccaagtcaaag 538

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,155,127,701
Number of extensions: 132894354
Number of successful extensions: 11116023
Number of sequences better than 10.0: 127
Length of query: 2023
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1999
Effective length of database: 97,308,875,965
Effective search space: 194520443054035
Effective search space used: 194520443054035
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Contig-U11847-1Q.Seq.d
(2023 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54IK9) RecName: Full=Protein hook homolog; AltName: Full=DdHk3; 576 e-162
BC072875_1(BC072875|pid:none) Xenopus laevis MGC80292 protein, m... 112 7e-23
BC090960_1(BC090960|pid:none) Mus musculus hook homolog 3 (Droso... 106 4e-21
(Q8BUK6) RecName: Full=Protein Hook homolog 3; &AK145149_1(AK14... 104 1e-20
BC048304_1(BC048304|pid:none) Homo sapiens hook homolog 3 (Droso... 100 3e-19
AK054263_1(AK054263|pid:none) Mus musculus 2 days pregnant adult... 98 1e-18
BC070852_1(BC070852|pid:none) Xenopus laevis hypothetical protei... 96 6e-18
BX322665_5(BX322665|pid:none) Zebrafish DNA sequence from clone ... 91 2e-16
AY310154_1(AY310154|pid:none) Rattus norvegicus Ac1288 mRNA, com... 86 5e-15
AK301768_1(AK301768|pid:none) Homo sapiens cDNA FLJ53232 complet... 81 2e-13
DQ895143_1(DQ895143|pid:none) Synthetic construct Homo sapiens c... 81 2e-13
AB179475_1(AB179475|pid:none) Macaca fascicularis testis cDNA cl... 80 2e-13
(Q24185) RecName: Full=Protein hook; AltName: Full=dHK; &AE0141... 77 3e-12
(Q8BIL5) RecName: Full=Protein Hook homolog 1; &AF487912_1(AF48... 75 7e-12
AK043870_1(AK043870|pid:none) Mus musculus 10 days neonate corte... 75 7e-12
BC077466_1(BC077466|pid:none) Xenopus laevis hypothetical protei... 75 9e-12
CR760150_1(CR760150|pid:none) Xenopus tropicalis finished cDNA, ... 75 1e-11
(O61493) RecName: Full=Protein hook; &AF044926_1(AF044926|pid:n... 74 2e-11
BC012443_1(BC012443|pid:none) Homo sapiens hook homolog 2 (Droso... 71 1e-10
AJ720607_1(AJ720607|pid:none) Gallus gallus mRNA for hypothetica... 67 3e-09
BC136161_1(BC136161|pid:none) Xenopus tropicalis hypothetical pr... 66 4e-09
DQ104207_1(DQ104207|pid:none) Homo sapiens HOOK3-RET fusion prot... 66 4e-09
AE009439_771(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 64 2e-08
AK137723_1(AK137723|pid:none) Mus musculus adult female vagina c... 61 1e-07
AL844508_36(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 60 4e-07
BC055648_1(BC055648|pid:none) Danio rerio zgc:66419, mRNA (cDNA ... 58 1e-06
AK136069_1(AK136069|pid:none) Mus musculus in vitro fertilized e... 56 6e-06
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 56 6e-06
CP000879_1305(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 55 7e-06
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 55 7e-06
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 55 1e-05
CR382133_505(CR382133|pid:none) Debaryomyces hansenii strain CBS... 55 1e-05
AF360120_1(AF360120|pid:none) Human herpesvirus 8 ORF73 gene, co... 55 1e-05
CP000227_4526(CP000227|pid:none) Bacillus cereus Q1, complete ge... 54 3e-05
AF039187_1(AF039187|pid:none) Schistosoma japonicum myosin mRNA,... 54 3e-05
AK038941_1(AK038941|pid:none) Mus musculus adult male hypothalam... 53 4e-05
X65591_1(X65591|pid:none) S.mansoni mRNA for myosin II heavy cha... 53 4e-05
S33068(S33068)myosin heavy chain - fluke (Schistosoma mansoni) (... 53 4e-05
FN357667_8(FN357667|pid:none) Schistosoma mansoni genome sequenc... 53 5e-05
FN357667_11(FN357667|pid:none) Schistosoma mansoni genome sequen... 53 5e-05
FN357667_12(FN357667|pid:none) Schistosoma mansoni genome sequen... 53 5e-05
FN357667_9(FN357667|pid:none) Schistosoma mansoni genome sequenc... 53 5e-05
FN357667_10(FN357667|pid:none) Schistosoma mansoni genome sequen... 53 5e-05
DQ022376_1(DQ022376|pid:none) Danio rerio smooth muscle myosin h... 52 6e-05
BC162152_1(BC162152|pid:none) Danio rerio myosin, heavy polypept... 52 6e-05
AE014186_199(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 52 8e-05
AM910989_8(AM910989|pid:none) Plasmodium knowlesi strain H chrom... 52 8e-05
AB036846_1(AB036846|pid:none) Ciona intestinalis Ci-tropm1 mRNA ... 52 1e-04
U93872_83(U93872|pid:none) Kaposi's sarcoma-associated herpesvir... 52 1e-04
AF209068_1(AF209068|pid:none) Drosophila melanogaster Mud protei... 52 1e-04
BT075640_1(BT075640|pid:none) Osmerus mordax clone omor-rgc-505-... 51 1e-04
AF305694_1(AF305694|pid:none) Kaposi's sarcoma-associated herpes... 51 1e-04
AF148805_82(AF148805|pid:none) Human herpesvirus 8 type P isolat... 50 2e-04
AF155191_1(AF155191|pid:none) Ciona intestinalis tropomyosin-lik... 50 2e-04
DQ522166_1(DQ522166|pid:none) Streptococcus dysgalactiae subsp. ... 50 3e-04
L03534_1(L03534|pid:none) Entamoeba histolytica myosin heavy cha... 50 3e-04
AY596297_1640(AY596297|pid:none) Haloarcula marismortui ATCC 430... 50 3e-04
AF174134_3(AF174134|pid:none) Drosophila melanogaster mRNA cappi... 50 3e-04
AF042349_1(AF042349|pid:none) Loligo pealei myosin heavy chain i... 50 3e-04
(P25386) RecName: Full=Intracellular protein transport protein U... 50 3e-04
X54378_1(X54378|pid:none) S.cerevisiae gene for Uso1 protein, in... 50 3e-04
AC113930_2(AC113930|pid:none) Oryza sativa (japonica cultivar-gr... 50 4e-04
L03188_1(L03188|pid:none) Saccharomyces cerevisiae integrin anal... 50 4e-04
BC107857_1(BC107857|pid:none) Homo sapiens hook homolog 1 (Droso... 49 5e-04
CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 49 5e-04
AE014134_2932(AE014134|pid:none) Drosophila melanogaster chromos... 49 5e-04
CR380950_222(CR380950|pid:none) Candida glabrata strain CBS138 c... 49 5e-04
AE014134_2927(AE014134|pid:none) Drosophila melanogaster chromos... 49 5e-04
CR382125_227(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 49 5e-04
CP000679_1519(CP000679|pid:none) Caldicellulosiruptor saccharoly... 49 5e-04
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 49 5e-04
AE014134_2926(AE014134|pid:none) Drosophila melanogaster chromos... 49 5e-04
AP007159_294(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 49 5e-04
CP000771_697(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 49 5e-04
AF041382_1(AF041382|pid:none) Drosophila melanogaster microtubul... 49 5e-04
AE014134_2928(AE014134|pid:none) Drosophila melanogaster chromos... 49 5e-04
(O29230) RecName: Full=DNA double-strand break repair rad50 ATPa... 49 7e-04
PC4035(PC4035) cell-cycle-dependent 350K nuclear protein - human... 49 7e-04
CR382132_1263(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 49 7e-04
U19769_1(U19769|pid:none) Human CENP-F kinetochore protein mRNA,... 49 0.001
BC094096_1(BC094096|pid:none) Xenopus laevis hypothetical protei... 49 0.001
(P49454) RecName: Full=Centromere protein F; AltName: Full=Kinet... 49 0.001
CR940347_653(CR940347|pid:none) Theileria annulata strain Ankara... 49 0.001
U30872_1(U30872|pid:none) Human mitosin mRNA, complete cds. 49 0.001
AK060540_1(AK060540|pid:none) Oryza sativa Japonica Group cDNA c... 48 0.001
AY971753_1(AY971753|pid:none) Wolbachia pipientis ankyrin domain... 48 0.001
AE017196_65(AE017196|pid:none) Wolbachia endosymbiont of Drosoph... 48 0.001
AC006550_10(AC006550|pid:none) Arabidopsis thaliana chromosome 1... 48 0.001
AB015484_1(AB015484|pid:none) Dugesia japonica mRNA for myosin h... 48 0.001
Z48241_8(Z48241|pid:none) Caenorhabditis elegans Cosmid C32A3, c... 48 0.001
AM502232_118(AM502232|pid:none) Leishmania infantum chromosome 14. 48 0.001
Z48241_7(Z48241|pid:none) Caenorhabditis elegans Cosmid C32A3, c... 48 0.001
BX547928_4(BX547928|pid:none) Zebrafish DNA sequence from clone ... 48 0.002
AX683754_1(AX683754|pid:none) Sequence 1 from Patent WO03006499.... 48 0.002
BA000023_2271(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 48 0.002
U69668_1(U69668|pid:none) Human nuclear pore complex-associated ... 48 0.002
BC166177_1(BC166177|pid:none) Xenopus tropicalis hypothetical pr... 48 0.002
AB308320_1(AB308320|pid:none) Oratosquilla oratoria Tm mRNA for ... 48 0.002
CP001146_1446(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 48 0.002
EF584510_1(EF584510|pid:none) Squilla oratoria tropomyosin mRNA,... 48 0.002
AY810728_1(AY810728|pid:none) Schistosoma japonicum SJCHGC05441 ... 47 0.002
BC055266_1(BC055266|pid:none) Xenopus laevis hypothetical protei... 47 0.002
EF191691_1(EF191691|pid:none) Taeniopygia guttata clone 0057P000... 47 0.002
AM502232_120(AM502232|pid:none) Leishmania infantum chromosome 14. 47 0.002
CP000852_369(CP000852|pid:none) Caldivirga maquilingensis IC-167... 47 0.002
CU633899_80(CU633899|pid:none) Podospora anserina genomic DNA ch... 47 0.002
BC097514_1(BC097514|pid:none) Xenopus laevis cDNA clone MGC:1146... 47 0.002
AE017194_4937(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 47 0.002
(Q6P6L0) RecName: Full=Filamin A-interacting protein 1-like; Alt... 47 0.002
(O74424) RecName: Full=Nucleoporin nup211; AltName: Full=Nuclear... 47 0.002
BC070990_1(BC070990|pid:none) Xenopus laevis hypothetical protei... 47 0.002
CP000504_1265(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 47 0.003
(Q5R4H3) RecName: Full=Kinesin-like protein KIF3A; AltName: Full... 47 0.003
CP000123_229(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 47 0.003
CP000855_1429(CP000855|pid:none) Thermococcus onnurineus NA1, co... 47 0.003
(Q4R628) RecName: Full=Kinesin-like protein KIF3A; AltName: Full... 47 0.003
BC167944_1(BC167944|pid:none) Xenopus tropicalis cDNA clone IMAG... 47 0.003
(P58773) RecName: Full=Tropomyosin alpha-1 chain; AltName: Full=... 47 0.003
AY600861_1(AY600861|pid:none) Streptococcus sp. 'group G' FOG pr... 47 0.003
U52064_1(U52064|pid:none) Kaposi's sarcoma-associated herpes-lik... 47 0.003
FN357489_12(FN357489|pid:none) Schistosoma mansoni genome sequen... 47 0.003
AE014298_2110(AE014298|pid:none) Drosophila melanogaster chromos... 47 0.003
M69145_3(M69145|pid:none) Gallus gallus alpha-tropomyosin gene, ... 47 0.003
FN392322_109(FN392322|pid:none) Pichia pastoris GS115 chromosome... 47 0.003
AY916778_1(AY916778|pid:none) Danio rerio ELKS mRNA, complete cds. 47 0.003
(O67124) RecName: Full=Probable DNA double-strand break repair r... 47 0.003
(Q811D2) RecName: Full=Ankyrin repeat domain-containing protein ... 47 0.003
AB209780_1(AB209780|pid:none) Homo sapiens mRNA for Kinesin-like... 47 0.003
BC171689_1(BC171689|pid:none) Danio rerio ELKS, mRNA (cDNA clone... 47 0.003
CP001034_1349(CP001034|pid:none) Natranaerobius thermophilus JW/... 47 0.003
AE014298_2112(AE014298|pid:none) Drosophila melanogaster chromos... 47 0.003
M69145_2(M69145|pid:none) Gallus gallus alpha-tropomyosin gene, ... 47 0.003
M36336_1(M36336|pid:none) Chicken tropomyosin (clone CTm4) mRNA,... 47 0.003
AB463090_1(AB463090|pid:none) Synthetic construct DNA, clone: pF... 47 0.003
A28499(A28499;B26556) tropomyosin alpha chain, skin fibroblast -... 47 0.003
J00910_1(J00910|pid:none) chicken major alpha-tropomyosin mrna. 47 0.003
A47297(A47297;A55441) myosin heavy chain form B, nonmuscle - Afr... 47 0.003
AL844505_260(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.003
AK173096_1(AK173096|pid:none) Mus musculus premature mRNA for mK... 47 0.003
FM992688_365(FM992688|pid:none) Candida dubliniensis CD36 chromo... 47 0.003
AP007161_844(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 46 0.005
(P12847) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 46 0.005
DQ522165_1(DQ522165|pid:none) Streptococcus dysgalactiae subsp. ... 46 0.005
(P43047) RecName: Full=Uncharacterized protein MCAP_0864; AltNam... 46 0.005
(Q12234) RecName: Full=GRIP domain-containing protein RUD3; AltN... 46 0.005
(Q9D180) RecName: Full=Uncharacterized protein ENSP00000361571 h... 46 0.005
AL669952_1(AL669952|pid:none) Mouse DNA sequence from clone RP23... 46 0.005
AF112359_1(AF112359|pid:none) Schmidtea mediterranea clone M11 m... 46 0.005
AE013599_888(AE013599|pid:none) Drosophila melanogaster chromoso... 46 0.005
AE013599_887(AE013599|pid:none) Drosophila melanogaster chromoso... 46 0.005
(O61379) RecName: Full=Tropomyosin; AltName: Full=Allergen Pan s... 46 0.005
(P54697) RecName: Full=Myosin-J heavy chain; AltName: Full=Myosi... 46 0.005
T18278(T18278;T30579) myosin heavy chain [similarity] - slime mo... 46 0.005
FJ769183_1(FJ769183|pid:none) Procambarus clarkii tropomysin mRN... 46 0.005
AB236854_1(AB236854|pid:none) Trifolium pratense RNA for putativ... 46 0.006
BC144320_1(BC144320|pid:none) Homo sapiens coiled-coil domain co... 46 0.006
AB209996_1(AB209996|pid:none) Homo sapiens mRNA for CENPE varian... 46 0.006
EU841912_1(EU841912|pid:none) Xenopus laevis smooth muscle myosi... 46 0.006
AB201172_1(AB201172|pid:none) Homo sapiens GRDN mRNA for girdin,... 46 0.006
S03166(S03166;A27066;A26045;A36604;A43298) myosin heavy chain, g... 46 0.006
FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo... 46 0.006
BC150074_1(BC150074|pid:none) Bos taurus hypothetical LOC535277,... 46 0.006
CT005262_135(CT005262|pid:none) Leishmania major strain Friedlin... 46 0.006
S28261(S28261) centromere protein E - human &Z15005_1(Z15005|pi... 46 0.006
EU841911_1(EU841911|pid:none) Xenopus laevis smooth muscle myosi... 46 0.006
BC132736_1(BC132736|pid:none) Homo sapiens coiled-coil domain co... 46 0.006
BC091725_1(BC091725|pid:none) Xenopus laevis hypothetical protei... 46 0.006
AB169019_1(AB169019|pid:none) Macaca fascicularis testis cDNA, c... 46 0.006
M32441_1(M32441|pid:none) Chicken fast-twitch alpha-tropomyosin ... 46 0.006
AB057661_1(AB057661|pid:none) Gallus gallus myosin heavy chain m... 46 0.006
BC078168_1(BC078168|pid:none) Homo sapiens coiled-coil domain co... 46 0.006
CP001407_472(CP001407|pid:none) Bacillus cereus 03BB102, complet... 46 0.006
X95272_1(X95272|pid:none) R.norvegicus mRNA with open reading fr... 46 0.006
CU928171_294(CU928171|pid:none) Kluyveromyces thermotolerans str... 46 0.006
CP000393_2580(CP000393|pid:none) Trichodesmium erythraeum IMS101... 46 0.006
AB280018_1(AB280018|pid:none) Molgula tectiformis Mt-MHC2 mRNA f... 46 0.006
(Q3V6T2) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 46 0.006
AY517555_1(AY517555|pid:none) Homo sapiens hypothetical rhabdomy... 45 0.008
(Q6VGS5) RecName: Full=Protein Daple; AltName: Full=Dvl-associat... 45 0.008
AK137260_1(AK137260|pid:none) Mus musculus adult male urinary bl... 45 0.008
(Q6NRC9) RecName: Full=Leucine-rich repeat and coiled-coil domai... 45 0.008
AB090369_1(AB090369|pid:none) Takifugu rubripes TPM4-1 mRNA for ... 45 0.008
(P11055) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 45 0.008
CR548612_442(CR548612|pid:none) Paramecium tetraurelia macronucl... 45 0.008
AF192756_1(AF192756|pid:none) Kaposi's sarcoma-associated herpes... 45 0.008
AY445042_1(AY445042|pid:none) Streptococcus pyogenes SpyM6 mefA ... 45 0.008
AM502241_135(AM502241|pid:none) Leishmania infantum chromosome 23. 45 0.008
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 45 0.008
X15696_1(X15696|pid:none) Human muscle mRNA for embryonic myosin... 45 0.008
X13100_1(X13100|pid:none) Human mRNA fragment for myosin heavy c... 45 0.008
BC043115_1(BC043115|pid:none) Mus musculus coiled-coil domain co... 45 0.008
AB270632_1(AB270632|pid:none) Paralithodes camtschaticus Tm-Parc... 45 0.008
S04090(S04090;S06146;S05442;S12460;S09333;A35082) myosin heavy c... 45 0.008
CP000383_3441(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 45 0.010
FN392321_842(FN392321|pid:none) Pichia pastoris GS115 chromosome... 45 0.010
AM999887_1158(AM999887|pid:none) Wolbachia endosymbiont of Culex... 45 0.010
BC059323_1(BC059323|pid:none) Xenopus laevis hypothetical protei... 45 0.010
CS673472_1(CS673472|pid:none) Sequence 47 from Patent WO20070601... 45 0.010
CR628394_3(CR628394|pid:none) Zebrafish DNA sequence from clone ... 45 0.010
AJ851728_1(AJ851728|pid:none) Gallus gallus mRNA for hypothetica... 45 0.010
(Q25456) RecName: Full=Tropomyosin; AltName: Full=Allergen Met e... 45 0.010
CR380953_99(CR380953|pid:none) Candida glabrata strain CBS138 ch... 45 0.010
BC029231_1(BC029231|pid:none) Mus musculus ring finger protein 2... 45 0.010
(Q8K2Y0) RecName: Full=RING finger protein 219; 45 0.010
AY902464_1(AY902464|pid:none) Xenopus laevis TPR (TPR) mRNA, par... 45 0.013
AF162755_1(AF162755|pid:none) Rattus norvegicus cenexin 1 mRNA, ... 45 0.013
BC078857_1(BC078857|pid:none) Rattus norvegicus outer dense fibe... 45 0.013
AY319414_1(AY319414|pid:none) Homo sapiens outer dense fiber of ... 45 0.013
(A3KGV1) RecName: Full=Outer dense fiber protein 2; AltName: Ful... 45 0.013
AF068721_5(AF068721|pid:none) Caenorhabditis elegans cosmid ZK10... 45 0.013
AC116920_30(AC116920|pid:none) Dictyostelium discoideum chromoso... 45 0.013
AK299303_1(AK299303|pid:none) Homo sapiens cDNA FLJ55042 complet... 45 0.013
AB270635_1(AB270635|pid:none) Erimacrus isenbeckii Tm-Erii-twitc... 45 0.013
CR855260_1(CR855260|pid:none) Zebrafish DNA sequence from clone ... 45 0.013
BC057001_1(BC057001|pid:none) Mus musculus outer dense fiber of ... 45 0.013
AL928926_12(AL928926|pid:none) Mouse DNA sequence from clone RP2... 45 0.013
AK301842_1(AK301842|pid:none) Homo sapiens cDNA FLJ56168 complet... 45 0.013
BA000028_2491(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 45 0.013
AF012549_1(AF012549|pid:none) Homo sapiens outer dense fiber pro... 45 0.013
AL928926_13(AL928926|pid:none) Mouse DNA sequence from clone RP2... 45 0.013
AJ627213_5(AJ627213|pid:none) Gallus gallus primary C-C chemokin... 45 0.013
AK093367_1(AK093367|pid:none) Homo sapiens cDNA FLJ36048 fis, cl... 45 0.013
AL928926_6(AL928926|pid:none) Mouse DNA sequence from clone RP23... 45 0.013
AF053970_1(AF053970|pid:none) Homo sapiens outer dense fiber pro... 45 0.013
AK300793_1(AK300793|pid:none) Homo sapiens cDNA FLJ59435 complet... 45 0.013
AF034105_1(AF034105|pid:none) Mus musculus outer dense fiber 2 (... 45 0.013
T22507(T22507;T26336)hypothetical protein F52E10.5 - Caenorhabdi... 45 0.013
AF000968_1(AF000968|pid:none) Mus musculus outer dense fiber pro... 45 0.013
(Q6AYX5) RecName: Full=Outer dense fiber protein 2; AltName: Ful... 45 0.013
AK301855_1(AK301855|pid:none) Homo sapiens cDNA FLJ56030 complet... 45 0.013
BC094404_1(BC094404|pid:none) Xenopus laevis hypothetical protei... 45 0.013
CP000056_1698(CP000056|pid:none) Streptococcus pyogenes MGAS6180... 45 0.013
BC010629_1(BC010629|pid:none) Homo sapiens outer dense fiber of ... 45 0.013
BT045014_1(BT045014|pid:none) Salmo salar clone ssal-rgf-509-351... 45 0.013
(Q96FN2) RecName: Full=Outer dense fiber protein 2; AltName: Ful... 45 0.013
AL928926_9(AL928926|pid:none) Mouse DNA sequence from clone RP23... 45 0.013
FJ169627_1(FJ169627|pid:none) Jasus lalandii tropomyosin mRNA, p... 45 0.013
CR380956_330(CR380956|pid:none) Candida glabrata strain CBS138 c... 45 0.013
CP000589_198(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 45 0.013
AM999887_162(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 44 0.017
(Q14789) RecName: Full=Golgin subfamily B member 1; AltName: Ful... 44 0.017
CP000939_3201(CP000939|pid:none) Clostridium botulinum B1 str. O... 44 0.017
BX294143_40(BX294143|pid:none) Rhodopirellula baltica SH 1 compl... 44 0.017
CP000728_3170(CP000728|pid:none) Clostridium botulinum F str. La... 44 0.017
AB371588_1(AB371588|pid:none) Homo sapiens GOLGB1 mRNA for golgi... 44 0.017
CP001104_1013(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 44 0.017
D25542_1(D25542|pid:none) Homo sapiens mRNA for golgi antigen gc... 44 0.017
BC149227_1(BC149227|pid:none) Bos taurus myosin, heavy chain 3, ... 44 0.017
A56539(A56539;S37536) giantin - human &X75304_1(X75304|pid:none) 44 0.017
(Q6P3P1) RecName: Full=Tax1-binding protein 1 homolog; &BC06391... 44 0.017
CP000312_1813(CP000312|pid:none) Clostridium perfringens SM101, ... 44 0.017
(Q86ZC1) RecName: Full=Kinesin heavy chain; &AY230415_1(AY23041... 44 0.022
AM412317_3195(AM412317|pid:none) Clostridium botulinum A str. AT... 44 0.022
EF203088_77(EF203088|pid:none) Gryllus bimaculatus nudivirus, co... 44 0.022
CR382135_49(CR382135|pid:none) Debaryomyces hansenii strain CBS7... 44 0.022
AE014298_2261(AE014298|pid:none) Drosophila melanogaster chromos... 44 0.022
AC084023_9(AC084023|pid:none) Oryza sativa (japonica cultivar-gr... 44 0.022
AF134172_1(AF134172|pid:none) Pecten maximus myosin heavy chain ... 44 0.022
AC003096_4(AC003096|pid:none) Arabidopsis thaliana chromosome 2 ... 44 0.022
AM422018_468(AM422018|pid:none) Candidatus Phytoplasma australie... 44 0.022
(Q5RD97) RecName: Full=RING finger protein 219; &CR858019_1(CR8... 44 0.022
(Q27991) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 44 0.022
AL136651_1(AL136651|pid:none) Homo sapiens mRNA; cDNA DKFZp564N1... 44 0.022
CP001638_1002(CP001638|pid:none) Geobacillus sp. WCH70, complete... 44 0.022
AC078840_24(AC078840|pid:none) Oryza sativa chromosome 10 BAC OS... 44 0.022
CP001080_932(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 44 0.022
DQ099799_1(DQ099799|pid:none) Hyla chrysoscelis tropomyosin 4 mR... 44 0.022
BT045316_1(BT045316|pid:none) Salmo salar clone ssal-rgf-518-106... 44 0.022
AL935035_1(AL935035|pid:none) Zebrafish DNA sequence from clone ... 44 0.022
(Q6BHF8) RecName: Full=Autophagy-related protein 23; &CR382139_... 44 0.022
CP001229_945(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 44 0.022
AE014298_2260(AE014298|pid:none) Drosophila melanogaster chromos... 44 0.022
AY913766_1(AY913766|pid:none) Xenopus laevis ventricular myosin ... 44 0.029
AF182409_1(AF182409|pid:none) Bos taurus mitosin gene, partial c... 44 0.029
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 44 0.029
(Q5SNZ0) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 44 0.029
AF093264_1(AF093264|pid:none) Homo sapiens homer-2b mRNA, comple... 44 0.029
AM180088_861(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 44 0.029
AF081530_1(AF081530|pid:none) Homo sapiens neuralized binding pr... 44 0.029
AK294297_1(AK294297|pid:none) Homo sapiens cDNA FLJ55050 complet... 44 0.029
CP001129_1836(CP001129|pid:none) Streptococcus equi subsp. zooep... 44 0.029
BC091033_1(BC091033|pid:none) Xenopus tropicalis tpm2 protein, m... 44 0.029
AM494960_122(AM494960|pid:none) Leishmania braziliensis chromoso... 44 0.029
CR382127_301(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 44 0.029
BC068827_1(BC068827|pid:none) Xenopus laevis hypothetical protei... 44 0.029
BC144019_1(BC144019|pid:none) Homo sapiens synaptonemal complex ... 44 0.029
AY383616_1(AY383616|pid:none) Mus musculus TRAF3-interacting JNK... 44 0.029
AK292772_1(AK292772|pid:none) Homo sapiens cDNA FLJ75474 complet... 44 0.029
AF019980_1(AF019980|pid:none) Dictyostelium discoideum ZipA (zip... 44 0.029
AY224548_1(AY224548|pid:none) Oryza sativa (japonica cultivar-gr... 44 0.029
AB087827_1(AB087827|pid:none) Mus musculus mRNA for hypothetical... 44 0.029
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie... 44 0.029
(Q10030) RecName: Full=Uncharacterized protein C27D6.1; &T15654... 44 0.029
CP000743_970(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 44 0.029
U07707_1(U07707|pid:none) Human epidermal growth factor receptor... 44 0.029
CP001279_1404(CP001279|pid:none) Nautilia profundicola AmH, comp... 44 0.029
BX950229_1397(BX950229|pid:none) Methanococcus maripaludis strai... 44 0.029
AF093263_1(AF093263|pid:none) Homo sapiens homer-2a mRNA, comple... 44 0.029
AL358372_3(AL358372|pid:none) Human DNA sequence from clone RP11... 44 0.029
CP000724_2658(CP000724|pid:none) Alkaliphilus metalliredigens QY... 44 0.029
AF273043_1(AF273043|pid:none) Homo sapiens CTCL tumor antigen se... 44 0.029
BC101323_1(BC101323|pid:none) Homo sapiens CTAGE family, member ... 43 0.038
(P21249) RecName: Full=Major antigen; AltName: Full=Myosin-like ... 43 0.038
CP000682_1709(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 43 0.038
A24199(S06210;A24199) tropomyosin NM, skeletal muscle - human &... 43 0.038
BC163537_1(BC163537|pid:none) Danio rerio myosin, heavy polypept... 43 0.038
BC104393_1(BC104393|pid:none) Mus musculus TNFAIP3 interacting p... 43 0.038
(Q9TV62) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 43 0.038
EF585495_1(EF585495|pid:none) Mus musculus TNFAIP3-interacting p... 43 0.038
(Q86RN8) RecName: Full=Paramyosin; &AF479582_1(AF479582|pid:none) 43 0.038
(Q10411) RecName: Full=Sporulation-specific protein 15; &CU3296... 43 0.038
BX548175_2376(BX548175|pid:none) Prochlorococcus marinus MIT9313... 43 0.038
BC172941_1(BC172941|pid:none) Synthetic construct Mus musculus c... 43 0.038
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 43 0.038
BX510649_10(BX510649|pid:none) Zebrafish DNA sequence from clone... 43 0.038
AY618264_1(AY618264|pid:none) Mus musculus TSGA10 isoform mRNA, ... 43 0.038
AC159429_46(AC159429|pid:none) Trypanosoma brucei chromosome 7 c... 43 0.038
EU930276_1(EU930276|pid:none) Simulium vittatum clone SV-38 hypo... 43 0.038
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 43 0.038
A45592(S24597;A45592;S29393;S34842;B45592;C45592;D45592) liver s... 43 0.038
CT005253_116(CT005253|pid:none) Leishmania major strain Friedlin... 43 0.038
(Q9BE40) RecName: Full=Myosin-1; AltName: Full=Myosin heavy chai... 43 0.038
CP001108_2156(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 43 0.038
AE017308_531(AE017308|pid:none) Mycoplasma mobile 163K complete ... 43 0.038
CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 43 0.038
(Q640L5) RecName: Full=Coiled-coil domain-containing protein 18;... 43 0.038
(Q28641) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 43 0.038
X72090_1(X72090|pid:none) S.pyogenes emm55 gene for M-protein. 43 0.038
FN392319_975(FN392319|pid:none) Pichia pastoris GS115 chromosome... 43 0.038
BX510649_8(BX510649|pid:none) Zebrafish DNA sequence from clone ... 43 0.038
CP000061_184(CP000061|pid:none) Aster yellows witches'-broom phy... 43 0.038
CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS... 43 0.038
DQ286057_1(DQ286057|pid:none) Hydra vulgaris myosin heavy chain ... 43 0.050
(Q9N2R3) RecName: Full=Tropomyosin; AltName: Full=Allergen Cha f... 43 0.050
FN357361_22(FN357361|pid:none) Schistosoma mansoni genome sequen... 43 0.050
BC104538_1(BC104538|pid:none) Bos taurus tropomyosin 2 (beta), m... 43 0.050
CP000916_1394(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 43 0.050
CP001047_351(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 43 0.050
CP001034_1730(CP001034|pid:none) Natranaerobius thermophilus JW/... 43 0.050
(P08964) RecName: Full=Myosin-1; AltName: Full=Type II myosin; ... 43 0.050
AC005499_22(AC005499|pid:none) Arabidopsis thaliana chromosome 2... 43 0.050
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 43 0.050
AF183909_3(AF183909|pid:none) Argopecten irradians MHC gene, alt... 43 0.050
AF183909_2(AF183909|pid:none) Argopecten irradians MHC gene, alt... 43 0.050
U09782_1(U09782|pid:none) Argopecten irradians myosin heavy chai... 43 0.050
AF027728_1(AF027728|pid:none) Xenopus laevis kinesin-related pro... 43 0.050
AF480437_1(AF480437|pid:none) Ambystoma mexicanum tropomyosin mR... 43 0.050
AL732506_31(AL732506|pid:none) Mouse DNA sequence from clone RP2... 43 0.050
AF195898_4(AF195898|pid:none) Synechococcus PCC7002 hypothetical... 43 0.050
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 43 0.050
EF583983_19(EF583983|pid:none) Uncultured haloarchaeon clone fos... 43 0.050
AL732506_30(AL732506|pid:none) Mouse DNA sequence from clone RP2... 43 0.050
BC170424_1(BC170424|pid:none) Xenopus laevis nonmuscle myosin II... 43 0.050
(Q2T9U2) RecName: Full=Outer dense fiber protein 2; AltName: Ful... 43 0.050
AY465182_1(AY465182|pid:none) Nematostella vectensis tropomyosin... 43 0.050
U64862_5(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 43 0.050
AE014296_1895(AE014296|pid:none) Drosophila melanogaster chromos... 43 0.050
CU928175_510(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 43 0.050
CP001229_1223(CP001229|pid:none) Sulfurihydrogenibium azorense A... 43 0.050
U64862_4(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 43 0.050
CR382137_797(CR382137|pid:none) Debaryomyces hansenii strain CBS... 43 0.050
(Q9BE41) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 43 0.050
BC014809_1(BC014809|pid:none) Mus musculus tropomyosin 2, beta, ... 43 0.050
BC070984_1(BC070984|pid:none) Xenopus laevis hypothetical protei... 43 0.050
AF183909_1(AF183909|pid:none) Argopecten irradians MHC gene, alt... 43 0.050
AE017356_80(AE017356|pid:none) Cryptococcus neoformans var. neof... 43 0.050
U64862_3(U64862|pid:none) Caenorhabditis elegans cosmid ZC8, com... 43 0.050
(Q9TV63) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 43 0.050
(Q076A5) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 43 0.050
CP000609_181(CP000609|pid:none) Methanococcus maripaludis C5, co... 42 0.065
(Q58651) RecName: Full=Uncharacterized protein MJ1254; &E64456(... 42 0.065
(O44119) Tropomyosin (Allergen Hom a 1). &AF034953_1(AF034953|p... 42 0.065
AE000512_699(AE000512|pid:none) Thermotoga maritima MSB8, comple... 42 0.065
JC2551(JC2551) tropomyosin alpha chain - axolotl &L35107_1(L351... 42 0.065
AB289604_1(AB289604|pid:none) Euphausia pacifica mRNA for tropom... 42 0.065
T18356(T18356) membrane protein p120 - Mycoplasma hominis &X784... 42 0.065
AF288753_1(AF288753|pid:none) Streptococcus pyogenes isolate 720... 42 0.065
BC161636_1(BC161636|pid:none) Xenopus tropicalis hypothetical pr... 42 0.065
AK229581_1(AK229581|pid:none) Arabidopsis thaliana mRNA for kine... 42 0.065
FJ169628_1(FJ169628|pid:none) Jasus lalandii tropomyosin mRNA, p... 42 0.065
AC016662_26(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 42 0.065
AC114263_4(AC114263|pid:none) Dictyostelium discoideum chromosom... 42 0.065
(Q4L655) RecName: Full=Nuclease sbcCD subunit C; &AP006716_1561... 42 0.065
BC008538_1(BC008538|pid:none) Mus musculus myosin, heavy polypep... 42 0.065
AP006861_851(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 42 0.065
A44643(A44643;S60833)M protein precursor - Streptococcus pyogene... 42 0.065
AL596129_2(AL596129|pid:none) Mouse DNA sequence from clone RP23... 42 0.065
K02446_1(K02446|pid:none) Chicken smooth-muscle alpha-tropomyosi... 42 0.065
M34135_1(M34135|pid:none) Rat brain alpha-tropomyosin (TMBr-1) m... 42 0.065
(Q01173) RecName: Full=Tropomyosin alpha-1 chain; AltName: Full=... 42 0.065
CP001287_1060(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 42 0.065
FJ711065_1(FJ711065|pid:none) Streptococcus pyogenes strain GAP4... 42 0.065
A45627(A45627;B45526) myosin heavy chain [similarity] - nematode... 42 0.065
(Q9UZC8) RecName: Full=DNA double-strand break repair rad50 ATPa... 42 0.065
AE014185_193(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.065
AM910983_84(AM910983|pid:none) Plasmodium knowlesi strain H chro... 42 0.065
AK033534_1(AK033534|pid:none) Mus musculus adult male colon cDNA... 42 0.065
DQ227281_1(DQ227281|pid:none) Canis familiaris fast myosin heavy... 42 0.065
AM920435_561(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 42 0.065
AY075577_1(AY075577|pid:none) Drosophila melanogaster SD05887 fu... 42 0.065
(O33600) RecName: Full=DNA double-strand break repair rad50 ATPa... 42 0.065
AY521627_1(AY521627|pid:none) Homarus americanus slow-tonic S2 t... 42 0.065
CP001098_719(CP001098|pid:none) Halothermothrix orenii H 168, co... 42 0.065
FN357846_1(FN357846|pid:none) Schistosoma mansoni genome sequenc... 42 0.065
BC085518_1(BC085518|pid:none) Danio rerio tropomyosin 4, mRNA (c... 42 0.065
BC166356_1(BC166356|pid:none) Xenopus tropicalis hypothetical pr... 42 0.065
CT978603_337(CT978603|pid:none) Synechococcus sp. RCC307 genomic... 42 0.065
(P12882) RecName: Full=Myosin-1; AltName: Full=Myosin heavy chai... 42 0.065
AE017226_1485(AE017226|pid:none) Treponema denticola ATCC 35405,... 42 0.065
(Q54KI4) RecName: Full=Epidermal growth factor receptor substrat... 42 0.065
AL035416_1(AL035416|pid:none) Human DNA sequence from clone RP4-... 42 0.085
AK131384_1(AK131384|pid:none) Homo sapiens cDNA FLJ16459 fis, cl... 42 0.085
U62821_1(U62821|pid:none) Rattus norvegicus outer dense fiber pr... 42 0.085
AK077713_1(AK077713|pid:none) Mus musculus 8 days embryo whole b... 42 0.085
(Q9QWW1) RecName: Full=Homer protein homolog 2; Short=H... 42 0.085
BC126305_1(BC126305|pid:none) Homo sapiens CAP-GLY domain contai... 42 0.085
A39816(A39816) tropomyosin 2, fibroblast - rat &A60597(A31380;A... 42 0.085
(Q076A7) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 42 0.085
BC065425_1(BC065425|pid:none) Danio rerio zgc:77592, mRNA (cDNA ... 42 0.085
(Q6PCJ1) RecName: Full=Dynactin subunit 1; &BC059305_1(BC059305... 42 0.085
AF372217_1(AF372217|pid:none) Rattus norvegicus brain tropomyosi... 42 0.085
(P32380) RecName: Full=Protein NUF1; AltName: Full=Spindle poly ... 42 0.085
(Q9UKX2) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 42 0.085
CP001047_47(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, c... 42 0.085
CP000097_2059(CP000097|pid:none) Synechococcus sp. CC9902, compl... 42 0.085
A27674(A27674;PC2283;PC2284) tropomyosin 3, fibroblast - human ... 42 0.085
AY892299_1(AY892299|pid:none) Synthetic construct Homo sapiens c... 42 0.085
AE016818_391(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 42 0.085
BC114213_1(BC114213|pid:none) Homo sapiens CAP-GLY domain contai... 42 0.085
EF107528_1(EF107528|pid:none) Sinonovacula constricta tropomyosi... 42 0.085
(P47166) RecName: Full=Protein SGM1; AltName: Full=Slow growth o... 42 0.085
(Q86UF2) RecName: Full=Protein cTAGE-6; AltName: Full=cTAGE fami... 42 0.085
EF596012_1(EF596012|pid:none) Tyrophagus putrescentiae tropomyos... 42 0.085
CP001083_3323(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 42 0.085
BX510904_1(BX510904|pid:none) Homo sapiens mRNA; cDNA DKFZp451A1... 42 0.085
M18135_4(M18135|pid:none) Rat alpha-tropomyosin gene, exon 12. 42 0.085
AB004801_1(AB004801|pid:none) Gallus gallus mRNA for chick atria... 42 0.085
AK032942_1(AK032942|pid:none) Mus musculus 12 days embryo male w... 42 0.085
AM270157_7(AM270157|pid:none) Aspergillus niger contig An08c0020... 42 0.085
(P58771) RecName: Full=Tropomyosin alpha-1 chain; AltName: Full=... 42 0.085
AF226696_1(AF226696|pid:none) Streptococcus dysgalactiae subsp. ... 42 0.085
AY421740_1(AY421740|pid:none) Limulus polyphemus tropomyosin mRN... 42 0.085
AB109447_1(AB109447|pid:none) Thunnus thynnus mRNA for tropomyos... 42 0.085
M19714_1(M19714|pid:none) Human skeletal muscle alpha-tropomyosi... 42 0.085
BT085697_1(BT085697|pid:none) Zea mays full-length cDNA clone ZM... 42 0.085
CP001083_2568(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 42 0.085
(A6NC57) RecName: Full=UPF0634 protein D; 42 0.085
AL845510_3(AL845510|pid:none) Zebrafish DNA sequence from clone ... 42 0.085
M15474_1(M15474|pid:none) Rat alpha-tropomyosin gene, exon 11. 42 0.085
B39816(B39816) tropomyosin 3, fibroblast - rat &M60667_1(M60667... 42 0.085
CP000724_2515(CP000724|pid:none) Alkaliphilus metalliredigens QY... 42 0.085
AC116957_105(AC116957|pid:none) Dictyostelium discoideum chromos... 42 0.085
AB017136_1(AB017136|pid:none) Mus musculus mRNA for cupidin, com... 42 0.085
BC078243_1(BC078243|pid:none) Danio rerio im:7149072, mRNA (cDNA... 42 0.11
(Q9GYZ0) RecName: Full=Kinesin-like protein KIF15; AltName: Full... 42 0.11
AB090371_1(AB090371|pid:none) Takifugu rubripes TPM4-2 mRNA for ... 42 0.11
CP000962_3111(CP000962|pid:none) Clostridium botulinum A3 str. L... 42 0.11
(Q8MJV1) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 42 0.11
BC137605_1(BC137605|pid:none) Mus musculus TRAF3 interacting pro... 42 0.11
FN357361_25(FN357361|pid:none) Schistosoma mansoni genome sequen... 42 0.11
BC101324_1(BC101324|pid:none) Homo sapiens CTAGE family, member ... 42 0.11
L25609_1(L25609|pid:none) Salmo salar fast myotomal muscle tropo... 42 0.11
(Q9UKX3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 42 0.11
T44607(T44607) hypothetical protein hp71 - Halobacterium salinar... 42 0.11
CP000922_2568(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 42 0.11
(Q967Z0) RecName: Full=Paramyosin; AltName: Full=Antigen Df642; ... 42 0.11
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 42 0.11
BC146726_1(BC146726|pid:none) Danio rerio zgc:165463, mRNA (cDNA... 42 0.11
CP000609_236(CP000609|pid:none) Methanococcus maripaludis C5, co... 42 0.11
(P42638) Tropomyosin-2 (TMII). &FN357361_19(FN357361|pid:none) ... 42 0.11
BC150737_1(BC150737|pid:none) Mus musculus myosin, heavy polypep... 42 0.11
AE017346_327(AE017346|pid:none) Cryptococcus neoformans var. neo... 42 0.11
X53947_1(X53947|pid:none) Yeast MYO1 gene for myosin heavy chain... 42 0.11
AK304803_1(AK304803|pid:none) Homo sapiens cDNA FLJ57036 complet... 42 0.11
AP008210_135(AP008210|pid:none) Oryza sativa (japonica cultivar-... 42 0.11
DQ288858_102(DQ288858|pid:none) Spodoptera litura granulovirus i... 42 0.11
AY421744_1(AY421744|pid:none) Syntelopodeuma sp. YSL-2003 tropom... 42 0.11
(O18416) Tropomyosin (Allergen Der p 10). &Y14906_1(Y14906|pid:... 42 0.11
AM494950_30(AM494950|pid:none) Leishmania braziliensis chromosom... 42 0.11
AM910990_191(AM910990|pid:none) Plasmodium knowlesi strain H chr... 42 0.11
BT045917_1(BT045917|pid:none) Salmo salar clone ssal-rgf-536-260... 42 0.11
AF288752_1(AF288752|pid:none) Streptococcus pyogenes isolate 314... 42 0.11
(P13542) RecName: Full=Myosin-8; AltName: Full=Myosin heavy chai... 42 0.11
JC6199(JC6199) alpha-tropomyosin S-1 - axolotl &U33450_1(U33450... 42 0.11
AJ249992_1(AJ249992|pid:none) Mytilus galloprovincialis partial ... 42 0.11
AB090362_1(AB090362|pid:none) Takifugu rubripes TPM1-1 mRNA for ... 42 0.11
CR761987_1(CR761987|pid:none) Xenopus tropicalis finished cDNA, ... 42 0.11
(P05659) RecName: Full=Myosin-2 heavy chain, non muscle; AltName... 42 0.11
X54277_1(X54277|pid:none) C.coturnix japonica gene for cardiac t... 42 0.11
AB218917_1(AB218917|pid:none) Octopus vulgaris ov-tm mRNA for tr... 42 0.11
BX537126_1(BX537126|pid:none) Zebrafish DNA sequence from clone ... 42 0.11
CP000058_3073(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 42 0.11
FJ204409_1(FJ204409|pid:none) Dermatophagoides pteronyssinus str... 42 0.11
AK150270_1(AK150270|pid:none) Mus musculus bone marrow macrophag... 41 0.15
A28742_1(A28742|pid:none) cDNA for LSA gene 5' (partial). &Z303... 41 0.15
AY890926_1(AY890926|pid:none) Synthetic construct Homo sapiens c... 41 0.15
CP000099_369(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 41 0.15
BC151307_1(BC151307|pid:none) Bos taurus epidermal growth factor... 41 0.15
AL844506_105(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.15
EU106177_1(EU106177|pid:none) Homo sapiens beta tropomyosin isof... 41 0.15

>(Q54IK9) RecName: Full=Protein hook homolog; AltName: Full=DdHk3;
Length = 734

Score = 576 bits (1484), Expect = e-162
Identities = 322/405 (79%), Positives = 322/405 (79%)
Frame = +2

Query: 746 SLRDEIDILRXXXXXXXXXXXXXXXHQKKIEEIGDLKKKIKELEDQNDSYIQQTLDLEEQ 925
SLRDEIDILR HQKKIEEIGDLKKKIKELEDQNDSYIQQTLDLEEQ
Sbjct: 330 SLRDEIDILREKAANAEATEEKLKKHQKKIEEIGDLKKKIKELEDQNDSYIQQTLDLEEQ 389

Query: 926 LSKNNTYRTQADSGKQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDSLQSQV 1105
LSKNNTYRTQADSGKQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDSLQSQV
Sbjct: 390 LSKNNTYRTQADSGKQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDSLQSQV 449

Query: 1106 TNLRNTIDNQQQEYETKFVDLQXXXXXXXXXXXXXXDEVIDGSTKERIARLERDNKRLKE 1285
TNLRNTIDNQQQEYETKFVDLQ DEVIDGSTKERIARLERDNKRLKE
Sbjct: 450 TNLRNTIDNQQQEYETKFVDLQSSISLNSGGSGGLGDEVIDGSTKERIARLERDNKRLKE 509

Query: 1286 VAEKASELENQLEDANQSKELLTXXXXXXXXXXXXSXXXXXXXXXXXMVDSSXXXXXXXX 1465
VAEKASELENQLEDANQSKELLT S MVDSS
Sbjct: 510 VAEKASELENQLEDANQSKELLTIQIKQLEEQKQQSNNTNNNNNNNNMVDSSEIESLKQQ 569

Query: 1466 XXXXXXXXXTLKRKLEESNLSLDENRKQLVELSQRPTTQSPGDIXXXXXXXXXXXXXDGL 1645
TLKRKLEESNLSLDENRKQLVELSQRPTTQSPGDI DGL
Sbjct: 570 LKEKEKEISTLKRKLEESNLSLDENRKQLVELSQRPTTQSPGDIEKLENYENLLKENDGL 629

Query: 1646 EVRLRAARNIIKDLREKHKSYSNQETQLATKDEVITKLEGLVKKKTDINEDLRKQLEEGR 1825
E RLRAARNIIKDLREKHKSYSNQETQLATKDEVITKLEGLVKKKTDINEDLRKQLEEGR
Sbjct: 630 EGRLRAARNIIKDLREKHKSYSNQETQLATKDEVITKLEGLVKKKTDINEDLRKQLEEGR 689

Query: 1826 EESQREINLMLSAFLKIGLEMEQVKIQNISSSKEPRSFLNKKRAD 1960
EESQREINLMLSAFLKIGLEMEQVKIQNISSSKEPRSFLNKKRAD
Sbjct: 690 EESQREINLMLSAFLKIGLEMEQVKIQNISSSKEPRSFLNKKRAD 734

Score = 268 bits (685), Expect = 6e-70
Identities = 137/162 (84%), Positives = 137/162 (84%)
Frame = +3

Query: 171 MIETSFIKWINSFKDLSNSIEDLKELSNGTIFNEICCQIAPKYFDIDSLRKDGLDNWIFR 350
MIETSFIKWINSFKDLSNSIEDLKELSNGTIFNEICCQIAPKYFDIDSLRKDGLDNWIFR
Sbjct: 1 MIETSFIKWINSFKDLSNSIEDLKELSNGTIFNEICCQIAPKYFDIDSLRKDGLDNWIFR 60

Query: 351 EENIKNIVERVDEFYIEEMGLNDQXXXXXXXXXXXXXXXXXXXXXXXXXGMAMESENNEA 530
EENIKNIVERVDEFYIEEMGLNDQ GMAMESENNEA
Sbjct: 61 EENIKNIVERVDEFYIEEMGLNDQISSINCEEIANENIDEIILLIEAILGMAMESENNEA 120

Query: 531 VIENILSLDQDTQNDLMVVVAKIQQSHQPNTVDNSKSFDKDG 656
VIENILSLDQDTQNDLMVVVAKIQQSHQPNTVDNSKSFDKDG
Sbjct: 121 VIENILSLDQDTQNDLMVVVAKIQQSHQPNTVDNSKSFDKDG 162

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,133,487,538
Number of extensions: 32795439
Number of successful extensions: 135160
Number of sequences better than 10.0: 1970
Number of HSP's gapped: 133329
Number of HSP's successfully gapped: 2703
Length of query: 674
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 539
Effective length of database: 614,245,399
Effective search space: 331078270061
Effective search space used: 331078270061
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.35 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.30 mip: 0.00
nuc: 0.06 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: peroxisomal

>> prediction for Contig-U11847-1 is cyt

VS (DIR, S) 2
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0